Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 Y_RNA.602-201ENST00000410535 92 ntBASIC-0.19□□□□□ -2.44
ECHDC3Q96DC8 RNA5SP261-201ENST00000410536 106 ntBASIC-0.19□□□□□ -2.44
ECHDC3Q96DC8 RNU2-55P-201ENST00000411146 174 ntBASIC-0.19□□□□□ -2.44
ECHDC3Q96DC8 Y_RNA.641-201ENST00000459414 105 ntBASIC-0.19□□□□□ -2.44
ECHDC3Q96DC8 MIR4491-201ENST00000581087 68 ntBASIC-0.19□□□□□ -2.44
ECHDC3Q96DC8 MIR4639-201ENST00000584938 69 ntBASIC-0.19□□□□□ -2.44
ECHDC3Q96DC8 AC097639.2-201ENST00000603159 172 ntBASIC-0.19□□□□□ -2.44
ECHDC3Q96DC8 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.2□□□□□ -2.44
ECHDC3Q96DC8 Y_RNA.293-201ENST00000364908 93 ntBASIC-0.2□□□□□ -2.44
ECHDC3Q96DC8 SNORA63.7-201ENST00000365579 123 ntBASIC-0.2□□□□□ -2.44
ECHDC3Q96DC8 Y_RNA.380-201ENST00000365663 111 ntBASIC-0.2□□□□□ -2.44
ECHDC3Q96DC8 SNORA2A-201ENST00000383885 135 ntBASIC-0.2□□□□□ -2.44
ECHDC3Q96DC8 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.2□□□□□ -2.44
ECHDC3Q96DC8 RNU6-291P-201ENST00000384720 107 ntBASIC-0.2□□□□□ -2.44
ECHDC3Q96DC8 MIR145-201ENST00000384967 88 ntBASIC-0.2□□□□□ -2.44
ECHDC3Q96DC8 RNU7-45P-201ENST00000459460 63 ntBASIC-0.2□□□□□ -2.44
ECHDC3Q96DC8 RNU7-129P-201ENST00000516128 62 ntBASIC-0.2□□□□□ -2.44
ECHDC3Q96DC8 MIR4802-201ENST00000581881 80 ntBASIC-0.2□□□□□ -2.44
ECHDC3Q96DC8 MIR4636-201ENST00000582271 80 ntBASIC-0.2□□□□□ -2.44
ECHDC3Q96DC8 RNU1-29P-201ENST00000606574 126 ntBASIC-0.2□□□□□ -2.44
ECHDC3Q96DC8 AL008718.3-201ENST00000610217 321 ntBASIC-0.2□□□□□ -2.44
ECHDC3Q96DC8 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.2□□□□□ -2.44
ECHDC3Q96DC8 Y_RNA.634-201ENST00000364811 113 ntBASIC-0.21□□□□□ -2.44
ECHDC3Q96DC8 RNA5SP128-201ENST00000365305 116 ntBASIC-0.21□□□□□ -2.44
ECHDC3Q96DC8 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.21□□□□□ -2.44
ECHDC3Q96DC8 SNORA8.3-201ENST00000384679 139 ntBASIC-0.21□□□□□ -2.44
ECHDC3Q96DC8 SNORA26-201ENST00000391286 122 ntBASIC-0.21□□□□□ -2.44
ECHDC3Q96DC8 MIR1265-201ENST00000408444 86 ntBASIC-0.21□□□□□ -2.44
ECHDC3Q96DC8 MTND4LP30-201ENST00000454092 297 ntBASIC-0.21□□□□□ -2.44
ECHDC3Q96DC8 AC141846.1-201ENST00000568348 142 ntBASIC-0.21□□□□□ -2.44
ECHDC3Q96DC8 AC006157.1-201ENST00000611750 366 ntBASIC-0.21□□□□□ -2.44
ECHDC3Q96DC8 MIR376A2-201ENST00000636782 80 ntBASIC-0.21□□□□□ -2.44
ECHDC3Q96DC8 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.22□□□□□ -2.44
ECHDC3Q96DC8 RNU6-403P-201ENST00000363163 104 ntBASIC-0.22□□□□□ -2.44
ECHDC3Q96DC8 RNU6-290P-201ENST00000365212 101 ntBASIC-0.22□□□□□ -2.44
ECHDC3Q96DC8 MIR643-201ENST00000385267 97 ntBASIC-0.22□□□□□ -2.44
ECHDC3Q96DC8 MIR760-201ENST00000390220 80 ntBASIC-0.22□□□□□ -2.44
ECHDC3Q96DC8 RNA5SP237-201ENST00000410414 113 ntBASIC-0.22□□□□□ -2.44
ECHDC3Q96DC8 RNA5SP153-201ENST00000516498 76 ntBASIC-0.22□□□□□ -2.44
ECHDC3Q96DC8 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-0.22□□□□□ -2.44
ECHDC3Q96DC8 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.22□□□□□ -2.44
ECHDC3Q96DC8 AC139792.2-201ENST00000624218 587 ntBASIC-0.22□□□□□ -2.44
ECHDC3Q96DC8 MIR6841-201ENST00000637129 72 ntBASIC-0.22□□□□□ -2.44
ECHDC3Q96DC8 RNU4-73P-201ENST00000363164 141 ntBASIC-0.23□□□□□ -2.45
ECHDC3Q96DC8 Y_RNA.154-201ENST00000363624 102 ntBASIC-0.23□□□□□ -2.45
ECHDC3Q96DC8 Y_RNA.197-201ENST00000364004 102 ntBASIC-0.23□□□□□ -2.45
ECHDC3Q96DC8 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.23□□□□□ -2.45
ECHDC3Q96DC8 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.23□□□□□ -2.45
ECHDC3Q96DC8 RNU4-10P-201ENST00000364383 140 ntBASIC-0.23□□□□□ -2.45
ECHDC3Q96DC8 RNU6-326P-201ENST00000365480 107 ntBASIC-0.23□□□□□ -2.45
ECHDC3Q96DC8 RNU6-46P-201ENST00000383860 107 ntBASIC-0.23□□□□□ -2.45
ECHDC3Q96DC8 Y_RNA.505-201ENST00000384489 102 ntBASIC-0.23□□□□□ -2.45
ECHDC3Q96DC8 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.23□□□□□ -2.45
ECHDC3Q96DC8 Y_RNA.619-201ENST00000410951 90 ntBASIC-0.23□□□□□ -2.45
ECHDC3Q96DC8 RNA5SP395-201ENST00000516567 118 ntBASIC-0.23□□□□□ -2.45
ECHDC3Q96DC8 RNU6-782P-201ENST00000516852 104 ntBASIC-0.23□□□□□ -2.45
ECHDC3Q96DC8 RNU6-897P-201ENST00000517135 105 ntBASIC-0.23□□□□□ -2.45
ECHDC3Q96DC8 snoU18.1-201ENST00000629629 71 ntBASIC-0.23□□□□□ -2.45
ECHDC3Q96DC8 RNU6-161P-201ENST00000363051 106 ntBASIC-0.24□□□□□ -2.45
ECHDC3Q96DC8 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.24□□□□□ -2.45
ECHDC3Q96DC8 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.24□□□□□ -2.45
ECHDC3Q96DC8 RNA5SP368-201ENST00000364298 116 ntBASIC-0.24□□□□□ -2.45
ECHDC3Q96DC8 Y_RNA.351-201ENST00000365436 96 ntBASIC-0.24□□□□□ -2.45
ECHDC3Q96DC8 RNU6-949P-201ENST00000384040 107 ntBASIC-0.24□□□□□ -2.45
ECHDC3Q96DC8 RNU6-662P-201ENST00000384253 104 ntBASIC-0.24□□□□□ -2.45
ECHDC3Q96DC8 MIR593-201ENST00000384856 100 ntBASIC-0.24□□□□□ -2.45
ECHDC3Q96DC8 MIR1912-201ENST00000410389 80 ntBASIC-0.24□□□□□ -2.45
ECHDC3Q96DC8 RNU6-121P-201ENST00000410525 99 ntBASIC-0.24□□□□□ -2.45
ECHDC3Q96DC8 RPL39P25-201ENST00000449384 154 ntBASIC-0.24□□□□□ -2.45
ECHDC3Q96DC8 RNU6-507P-201ENST00000516045 100 ntBASIC-0.24□□□□□ -2.45
ECHDC3Q96DC8 RNU6-1299P-201ENST00000516316 100 ntBASIC-0.24□□□□□ -2.45
ECHDC3Q96DC8 SNORA27.4-201ENST00000516650 95 ntBASIC-0.24□□□□□ -2.45
ECHDC3Q96DC8 MIR4645-201ENST00000583158 77 ntBASIC-0.24□□□□□ -2.45
ECHDC3Q96DC8 AP001180.6-201ENST00000584918 159 ntBASIC-0.24□□□□□ -2.45
ECHDC3Q96DC8 AC244669.1-204ENST00000621564 178 ntBASIC-0.24□□□□□ -2.45
ECHDC3Q96DC8 AC090574.1-201ENST00000623186 233 ntBASIC-0.24□□□□□ -2.45
ECHDC3Q96DC8 AC112487.2-201ENST00000637950 304 ntBASIC-0.24□□□□□ -2.45
ECHDC3Q96DC8 MIR302B-201ENST00000362188 73 ntBASIC-0.25□□□□□ -2.45
ECHDC3Q96DC8 MIR342-201ENST00000362212 99 ntBASIC-0.25□□□□□ -2.45
ECHDC3Q96DC8 SNORD114-28-201ENST00000363610 72 ntBASIC-0.25□□□□□ -2.45
ECHDC3Q96DC8 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.25□□□□□ -2.45
ECHDC3Q96DC8 SNORA1-201ENST00000384107 130 ntBASIC-0.25□□□□□ -2.45
ECHDC3Q96DC8 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.25□□□□□ -2.45
ECHDC3Q96DC8 MIR626-201ENST00000385032 94 ntBASIC-0.25□□□□□ -2.45
ECHDC3Q96DC8 Y_RNA.645-201ENST00000391229 102 ntBASIC-0.25□□□□□ -2.45
ECHDC3Q96DC8 HMGN2P22-201ENST00000427588 175 ntBASIC-0.25□□□□□ -2.45
ECHDC3Q96DC8 AL731563.1-201ENST00000442202 214 ntBASIC-0.25□□□□□ -2.45
ECHDC3Q96DC8 RPL39P34-201ENST00000477141 156 ntBASIC-0.25□□□□□ -2.45
ECHDC3Q96DC8 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.25□□□□□ -2.45
ECHDC3Q96DC8 MTND5P34-201ENST00000568888 325 ntBASIC-0.25□□□□□ -2.45
ECHDC3Q96DC8 MIR3152-201ENST00000579801 74 ntBASIC-0.25□□□□□ -2.45
ECHDC3Q96DC8 MIR8064-201ENST00000612863 90 ntBASIC-0.25□□□□□ -2.45
ECHDC3Q96DC8 UBE2WP1-201ENST00000362030 340 ntBASIC-0.26□□□□□ -2.45
ECHDC3Q96DC8 Y_RNA.24-201ENST00000362508 103 ntBASIC-0.26□□□□□ -2.45
ECHDC3Q96DC8 Y_RNA.304-201ENST00000365011 112 ntBASIC-0.26□□□□□ -2.45
ECHDC3Q96DC8 Y_RNA.395-201ENST00000383945 109 ntBASIC-0.26□□□□□ -2.45
ECHDC3Q96DC8 RNU6-756P-201ENST00000383997 107 ntBASIC-0.26□□□□□ -2.45
ECHDC3Q96DC8 RNY3P5-201ENST00000384127 102 ntBASIC-0.26□□□□□ -2.45
ECHDC3Q96DC8 RNU6-535P-201ENST00000384722 107 ntBASIC-0.26□□□□□ -2.45
ECHDC3Q96DC8 MIR892B-201ENST00000401279 77 ntBASIC-0.26□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 171.1 ms