Protein–RNA interactions for Protein: Q8N9H8

EXD3, Exonuclease mut-7 homolog, humanhuman

Predictions only

Length 876 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3Q8N9H8 AC011603.4-201ENST00000611325 277 ntBASIC1.34□□□□□ -2.19
EXD3Q8N9H8 TUG1_4.1-201ENST00000619464 181 ntBASIC1.34□□□□□ -2.19
EXD3Q8N9H8 AP001340.1-201ENST00000624405 217 ntBASIC1.34□□□□□ -2.19
EXD3Q8N9H8 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.2
EXD3Q8N9H8 Y_RNA.36-201ENST00000362602 112 ntBASIC1.33□□□□□ -2.2
EXD3Q8N9H8 Y_RNA.251-201ENST00000364551 99 ntBASIC1.33□□□□□ -2.2
EXD3Q8N9H8 AL603908.1-201ENST00000406098 201 ntBASIC1.33□□□□□ -2.2
EXD3Q8N9H8 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.33□□□□□ -2.2
EXD3Q8N9H8 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.33□□□□□ -2.2
EXD3Q8N9H8 Y_RNA.690-201ENST00000516603 95 ntBASIC1.33□□□□□ -2.2
EXD3Q8N9H8 SCARNA15-202ENST00000516881 127 ntBASIC1.33□□□□□ -2.2
EXD3Q8N9H8 RNU11-2P-201ENST00000516898 142 ntBASIC1.33□□□□□ -2.2
EXD3Q8N9H8 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.33□□□□□ -2.2
EXD3Q8N9H8 MIR3133-201ENST00000583157 78 ntBASIC1.33□□□□□ -2.2
EXD3Q8N9H8 AC091932.4-201ENST00000623386 200 ntBASIC1.33□□□□□ -2.2
EXD3Q8N9H8 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
EXD3Q8N9H8 RNU6-125P-201ENST00000384505 107 ntBASIC1.32□□□□□ -2.2
EXD3Q8N9H8 MIR598-201ENST00000384868 97 ntBASIC1.32□□□□□ -2.2
EXD3Q8N9H8 MIR569-201ENST00000385228 96 ntBASIC1.32□□□□□ -2.2
EXD3Q8N9H8 SNORA40-201ENST00000388090 126 ntBASIC1.32□□□□□ -2.2
EXD3Q8N9H8 RNU6-1054P-201ENST00000411293 104 ntBASIC1.32□□□□□ -2.2
EXD3Q8N9H8 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.32□□□□□ -2.2
EXD3Q8N9H8 RNU6-346P-201ENST00000516288 111 ntBASIC1.32□□□□□ -2.2
EXD3Q8N9H8 MIR3192-201ENST00000584920 77 ntBASIC1.32□□□□□ -2.2
EXD3Q8N9H8 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.32□□□□□ -2.2
EXD3Q8N9H8 MIR376A2-201ENST00000636782 80 ntBASIC1.32□□□□□ -2.2
EXD3Q8N9H8 AC010332.2-201ENST00000613083 1904 ntBASIC1.31□□□□□ -2.2
EXD3Q8N9H8 SNORD114-27-201ENST00000363766 70 ntBASIC1.31□□□□□ -2.2
EXD3Q8N9H8 SNORA1.1-201ENST00000364671 133 ntBASIC1.31□□□□□ -2.2
EXD3Q8N9H8 RNU6-915P-201ENST00000364943 103 ntBASIC1.31□□□□□ -2.2
EXD3Q8N9H8 RNU6-396P-201ENST00000365369 105 ntBASIC1.31□□□□□ -2.2
EXD3Q8N9H8 SNORD50.2-201ENST00000365465 70 ntBASIC1.31□□□□□ -2.2
EXD3Q8N9H8 Y_RNA.420-201ENST00000384043 110 ntBASIC1.31□□□□□ -2.2
EXD3Q8N9H8 RPS29P23-201ENST00000458635 123 ntBASIC1.31□□□□□ -2.2
EXD3Q8N9H8 RNU7-197P-201ENST00000458836 62 ntBASIC1.31□□□□□ -2.2
EXD3Q8N9H8 RNU5E-3P-201ENST00000515913 68 ntBASIC1.31□□□□□ -2.2
EXD3Q8N9H8 RNA5SP61-201ENST00000516453 100 ntBASIC1.31□□□□□ -2.2
EXD3Q8N9H8 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.31□□□□□ -2.2
EXD3Q8N9H8 MIR103A2-201ENST00000362154 78 ntBASIC1.3□□□□□ -2.2
EXD3Q8N9H8 U8.1-201ENST00000362843 134 ntBASIC1.3□□□□□ -2.2
EXD3Q8N9H8 RNA5SP264-201ENST00000363115 107 ntBASIC1.3□□□□□ -2.2
EXD3Q8N9H8 Y_RNA.205-201ENST00000364128 113 ntBASIC1.3□□□□□ -2.2
EXD3Q8N9H8 RNY1P6-201ENST00000384193 109 ntBASIC1.3□□□□□ -2.2
EXD3Q8N9H8 Y_RNA.568-201ENST00000384742 113 ntBASIC1.3□□□□□ -2.2
EXD3Q8N9H8 RNU6-460P-201ENST00000391158 108 ntBASIC1.3□□□□□ -2.2
EXD3Q8N9H8 AC245047.7-201ENST00000440265 293 ntBASIC1.3□□□□□ -2.2
EXD3Q8N9H8 RNU6-426P-201ENST00000516464 97 ntBASIC1.3□□□□□ -2.2
EXD3Q8N9H8 RNU6-1223P-201ENST00000517124 104 ntBASIC1.3□□□□□ -2.2
EXD3Q8N9H8 RNU6-165P-201ENST00000517170 99 ntBASIC1.3□□□□□ -2.2
EXD3Q8N9H8 U7.2-201ENST00000607576 63 ntBASIC1.3□□□□□ -2.2
EXD3Q8N9H8 RNU6-774P-201ENST00000363238 107 ntBASIC1.29□□□□□ -2.2
EXD3Q8N9H8 Y_RNA.374-201ENST00000365606 101 ntBASIC1.29□□□□□ -2.2
EXD3Q8N9H8 MIR539-201ENST00000365690 78 ntBASIC1.29□□□□□ -2.2
EXD3Q8N9H8 SNORD38B-201ENST00000384690 67 ntBASIC1.29□□□□□ -2.2
EXD3Q8N9H8 SNORA31.2-201ENST00000516019 134 ntBASIC1.29□□□□□ -2.2
EXD3Q8N9H8 RNA5SP236-201ENST00000516169 116 ntBASIC1.29□□□□□ -2.2
EXD3Q8N9H8 MIR2115-201ENST00000516657 100 ntBASIC1.29□□□□□ -2.2
EXD3Q8N9H8 AL022345.2-201ENST00000606307 135 ntBASIC1.29□□□□□ -2.2
EXD3Q8N9H8 SNORD38B-202ENST00000625943 69 ntBASIC1.29□□□□□ -2.2
EXD3Q8N9H8 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.28□□□□□ -2.2
EXD3Q8N9H8 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.28□□□□□ -2.2
EXD3Q8N9H8 SNORA25.3-201ENST00000363205 127 ntBASIC1.28□□□□□ -2.2
EXD3Q8N9H8 RNU6-690P-201ENST00000365242 106 ntBASIC1.28□□□□□ -2.2
EXD3Q8N9H8 RNU6-1319P-201ENST00000390855 104 ntBASIC1.28□□□□□ -2.2
EXD3Q8N9H8 RNU6-747P-201ENST00000390928 104 ntBASIC1.28□□□□□ -2.2
EXD3Q8N9H8 RNU6-241P-201ENST00000391148 104 ntBASIC1.28□□□□□ -2.2
EXD3Q8N9H8 RNU6-177P-201ENST00000411257 104 ntBASIC1.28□□□□□ -2.2
EXD3Q8N9H8 RPS3AP1-201ENST00000413190 320 ntBASIC1.28□□□□□ -2.2
EXD3Q8N9H8 SNORA70.22-201ENST00000517160 124 ntBASIC1.28□□□□□ -2.2
EXD3Q8N9H8 MIR548AO-201ENST00000579992 96 ntBASIC1.28□□□□□ -2.2
EXD3Q8N9H8 AP000753.3-201ENST00000604083 169 ntBASIC1.28□□□□□ -2.2
EXD3Q8N9H8 AL020996.3-201ENST00000606617 222 ntBASIC1.28□□□□□ -2.2
EXD3Q8N9H8 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.28□□□□□ -2.2
EXD3Q8N9H8 MIR6788-201ENST00000618842 66 ntBASIC1.28□□□□□ -2.2
EXD3Q8N9H8 MIR548J-201ENST00000408833 112 ntBASIC1.27□□□□□ -2.21
EXD3Q8N9H8 AC048334.1-201ENST00000477975 159 ntBASIC1.27□□□□□ -2.21
EXD3Q8N9H8 MIR8055-201ENST00000610739 97 ntBASIC1.27□□□□□ -2.21
EXD3Q8N9H8 AC021613.1-201ENST00000623880 111 ntBASIC1.27□□□□□ -2.21
EXD3Q8N9H8 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.26□□□□□ -2.21
EXD3Q8N9H8 RNU6-704P-201ENST00000364162 103 ntBASIC1.26□□□□□ -2.21
EXD3Q8N9H8 SNORA80D-201ENST00000384488 135 ntBASIC1.26□□□□□ -2.21
EXD3Q8N9H8 RNU6-913P-201ENST00000390913 95 ntBASIC1.26□□□□□ -2.21
EXD3Q8N9H8 AL022718.1-201ENST00000412004 84 ntBASIC1.26□□□□□ -2.21
EXD3Q8N9H8 MRPL35P3-201ENST00000421557 364 ntBASIC1.26□□□□□ -2.21
EXD3Q8N9H8 AL591704.2-201ENST00000421658 181 ntBASIC1.26□□□□□ -2.21
EXD3Q8N9H8 SUMO1P3-201ENST00000439961 304 ntBASIC1.26□□□□□ -2.21
EXD3Q8N9H8 AL392103.1-201ENST00000447000 198 ntBASIC1.26□□□□□ -2.21
EXD3Q8N9H8 Y_RNA.686-201ENST00000516548 134 ntBASIC1.26□□□□□ -2.21
EXD3Q8N9H8 AC133485.4-201ENST00000561835 220 ntBASIC1.26□□□□□ -2.21
EXD3Q8N9H8 AC138907.4-201ENST00000570107 226 ntBASIC1.26□□□□□ -2.21
EXD3Q8N9H8 MIR151B-201ENST00000584249 96 ntBASIC1.26□□□□□ -2.21
EXD3Q8N9H8 PRELID3BP2-201ENST00000605362 201 ntBASIC1.26□□□□□ -2.21
EXD3Q8N9H8 MIR7974-201ENST00000615835 79 ntBASIC1.26□□□□□ -2.21
EXD3Q8N9H8 MIR6717-201ENST00000622747 73 ntBASIC1.26□□□□□ -2.21
EXD3Q8N9H8 RNU6-647P-201ENST00000364243 107 ntBASIC1.25□□□□□ -2.21
EXD3Q8N9H8 Y_RNA.430-201ENST00000384081 110 ntBASIC1.25□□□□□ -2.21
EXD3Q8N9H8 MIR222-201ENST00000384992 110 ntBASIC1.25□□□□□ -2.21
EXD3Q8N9H8 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.25□□□□□ -2.21
EXD3Q8N9H8 RNA5SP436-201ENST00000516020 115 ntBASIC1.25□□□□□ -2.21
EXD3Q8N9H8 MIR3121-201ENST00000579680 77 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 243.1 ms