Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 RNU2-11P-201ENST00000459191 187 ntBASIC1.8□□□□□ -2.12
SLC44A3Q8N4M1 SNORD123-201ENST00000459473 70 ntBASIC1.8□□□□□ -2.12
SLC44A3Q8N4M1 RN7SL274P-201ENST00000492268 272 ntBASIC1.8□□□□□ -2.12
SLC44A3Q8N4M1 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.8□□□□□ -2.12
SLC44A3Q8N4M1 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.8□□□□□ -2.12
SLC44A3Q8N4M1 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.8□□□□□ -2.12
SLC44A3Q8N4M1 SNORD3E-202ENST00000627253 216 ntBASIC1.8□□□□□ -2.12
SLC44A3Q8N4M1 MIR342-201ENST00000362212 99 ntBASIC1.79□□□□□ -2.12
SLC44A3Q8N4M1 RNY4P6-201ENST00000363667 96 ntBASIC1.79□□□□□ -2.12
SLC44A3Q8N4M1 Y_RNA.309-201ENST00000365046 111 ntBASIC1.79□□□□□ -2.12
SLC44A3Q8N4M1 SNORA1.2-201ENST00000365189 134 ntBASIC1.79□□□□□ -2.12
SLC44A3Q8N4M1 AL161935.2-201ENST00000414627 60 ntBASIC1.79□□□□□ -2.12
SLC44A3Q8N4M1 MIR548AR-201ENST00000582191 57 ntBASIC1.79□□□□□ -2.12
SLC44A3Q8N4M1 ICE2P2-201ENST00000483823 2787 ntBASIC1.79□□□□□ -2.12
SLC44A3Q8N4M1 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.79□□□□□ -2.12
SLC44A3Q8N4M1 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.78□□□□□ -2.12
SLC44A3Q8N4M1 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.78□□□□□ -2.12
SLC44A3Q8N4M1 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SLC44A3Q8N4M1 Y_RNA.163-201ENST00000363702 113 ntBASIC1.78□□□□□ -2.12
SLC44A3Q8N4M1 SNORA16.1-201ENST00000364597 132 ntBASIC1.78□□□□□ -2.12
SLC44A3Q8N4M1 Y_RNA.328-201ENST00000365208 113 ntBASIC1.78□□□□□ -2.12
SLC44A3Q8N4M1 Y_RNA.370-201ENST00000365589 108 ntBASIC1.78□□□□□ -2.12
SLC44A3Q8N4M1 RNU6-1014P-201ENST00000383940 103 ntBASIC1.78□□□□□ -2.12
SLC44A3Q8N4M1 RNU6-203P-201ENST00000384038 104 ntBASIC1.78□□□□□ -2.12
SLC44A3Q8N4M1 MIR548D2-201ENST00000384955 97 ntBASIC1.78□□□□□ -2.12
SLC44A3Q8N4M1 RNU6-360P-201ENST00000390944 104 ntBASIC1.78□□□□□ -2.12
SLC44A3Q8N4M1 RNU7-45P-201ENST00000459460 63 ntBASIC1.78□□□□□ -2.12
SLC44A3Q8N4M1 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.13
SLC44A3Q8N4M1 RNU6-766P-201ENST00000362478 107 ntBASIC1.77□□□□□ -2.13
SLC44A3Q8N4M1 SNORA63.5-201ENST00000363548 123 ntBASIC1.77□□□□□ -2.13
SLC44A3Q8N4M1 RNU6-414P-201ENST00000363705 104 ntBASIC1.77□□□□□ -2.13
SLC44A3Q8N4M1 Y_RNA.495-201ENST00000384435 112 ntBASIC1.77□□□□□ -2.13
SLC44A3Q8N4M1 RNA5SP489-201ENST00000410986 109 ntBASIC1.77□□□□□ -2.13
SLC44A3Q8N4M1 RPS29P29-201ENST00000456396 171 ntBASIC1.77□□□□□ -2.13
SLC44A3Q8N4M1 RPL39P34-201ENST00000477141 156 ntBASIC1.77□□□□□ -2.13
SLC44A3Q8N4M1 RPS23P4-201ENST00000487908 423 ntBASIC1.77□□□□□ -2.13
SLC44A3Q8N4M1 RNU6-917P-201ENST00000516294 104 ntBASIC1.77□□□□□ -2.13
SLC44A3Q8N4M1 RNU6-1258P-201ENST00000516911 111 ntBASIC1.77□□□□□ -2.13
SLC44A3Q8N4M1 MIR3163-201ENST00000581592 73 ntBASIC1.77□□□□□ -2.13
SLC44A3Q8N4M1 AC095038.3-201ENST00000634439 195 ntBASIC1.77□□□□□ -2.13
SLC44A3Q8N4M1 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.76□□□□□ -2.13
SLC44A3Q8N4M1 RNU6-1123P-201ENST00000362347 106 ntBASIC1.76□□□□□ -2.13
SLC44A3Q8N4M1 Y_RNA.43-201ENST00000362670 111 ntBASIC1.76□□□□□ -2.13
SLC44A3Q8N4M1 U8.6-201ENST00000364939 135 ntBASIC1.76□□□□□ -2.13
SLC44A3Q8N4M1 RNU6-32P-201ENST00000383948 107 ntBASIC1.76□□□□□ -2.13
SLC44A3Q8N4M1 SNORA70.7-201ENST00000384159 133 ntBASIC1.76□□□□□ -2.13
SLC44A3Q8N4M1 RNU6-13P-201ENST00000384248 107 ntBASIC1.76□□□□□ -2.13
SLC44A3Q8N4M1 RNU6-12P-201ENST00000384604 107 ntBASIC1.76□□□□□ -2.13
SLC44A3Q8N4M1 RNU6-41P-201ENST00000384741 107 ntBASIC1.76□□□□□ -2.13
SLC44A3Q8N4M1 RNU6-1319P-201ENST00000390855 104 ntBASIC1.76□□□□□ -2.13
SLC44A3Q8N4M1 RNU6-913P-201ENST00000390913 95 ntBASIC1.76□□□□□ -2.13
SLC44A3Q8N4M1 RNU6-747P-201ENST00000390928 104 ntBASIC1.76□□□□□ -2.13
SLC44A3Q8N4M1 RNU6-241P-201ENST00000391148 104 ntBASIC1.76□□□□□ -2.13
SLC44A3Q8N4M1 RNU6-1190P-201ENST00000410811 104 ntBASIC1.76□□□□□ -2.13
SLC44A3Q8N4M1 RNU6-177P-201ENST00000411257 104 ntBASIC1.76□□□□□ -2.13
SLC44A3Q8N4M1 AL512326.2-201ENST00000426359 151 ntBASIC1.76□□□□□ -2.13
SLC44A3Q8N4M1 RNU7-73P-201ENST00000458743 63 ntBASIC1.76□□□□□ -2.13
SLC44A3Q8N4M1 SNORA74.3-201ENST00000517108 154 ntBASIC1.76□□□□□ -2.13
SLC44A3Q8N4M1 RNA5SP170-201ENST00000517150 101 ntBASIC1.76□□□□□ -2.13
SLC44A3Q8N4M1 AC004812.1-201ENST00000540773 146 ntBASIC1.76□□□□□ -2.13
SLC44A3Q8N4M1 AL096840.1-201ENST00000603287 93 ntBASIC1.76□□□□□ -2.13
SLC44A3Q8N4M1 AL589743.1-201ENST00000551932 2712 ntBASIC1.76□□□□□ -2.13
SLC44A3Q8N4M1 MIR302B-201ENST00000362188 73 ntBASIC1.75□□□□□ -2.13
SLC44A3Q8N4M1 Y_RNA.49-201ENST00000362714 112 ntBASIC1.75□□□□□ -2.13
SLC44A3Q8N4M1 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
SLC44A3Q8N4M1 RPL23AP6-201ENST00000446637 472 ntBASIC1.75□□□□□ -2.13
SLC44A3Q8N4M1 AC022254.1-201ENST00000567857 235 ntBASIC1.75□□□□□ -2.13
SLC44A3Q8N4M1 SNORA4-201ENST00000584302 138 ntBASIC1.75□□□□□ -2.13
SLC44A3Q8N4M1 AL020996.3-201ENST00000606617 222 ntBASIC1.75□□□□□ -2.13
SLC44A3Q8N4M1 AC243994.1-201ENST00000618627 109 ntBASIC1.75□□□□□ -2.13
SLC44A3Q8N4M1 AC087741.2-201ENST00000619415 172 ntBASIC1.75□□□□□ -2.13
SLC44A3Q8N4M1 SNORD115-2-201ENST00000362842 82 ntBASIC1.74□□□□□ -2.13
SLC44A3Q8N4M1 SNORD115-19-201ENST00000363098 82 ntBASIC1.74□□□□□ -2.13
SLC44A3Q8N4M1 SNORD115-18-201ENST00000363293 82 ntBASIC1.74□□□□□ -2.13
SLC44A3Q8N4M1 SNORD115-17-201ENST00000364612 82 ntBASIC1.74□□□□□ -2.13
SLC44A3Q8N4M1 SNORD115-20-201ENST00000365099 82 ntBASIC1.74□□□□□ -2.13
SLC44A3Q8N4M1 Y_RNA.327-201ENST00000365201 102 ntBASIC1.74□□□□□ -2.13
SLC44A3Q8N4M1 Y_RNA.430-201ENST00000384081 110 ntBASIC1.74□□□□□ -2.13
SLC44A3Q8N4M1 Y_RNA.531-201ENST00000384589 121 ntBASIC1.74□□□□□ -2.13
SLC44A3Q8N4M1 Y_RNA.537-201ENST00000384626 109 ntBASIC1.74□□□□□ -2.13
SLC44A3Q8N4M1 AC004965.1-201ENST00000413033 213 ntBASIC1.74□□□□□ -2.13
SLC44A3Q8N4M1 MIR1270-201ENST00000459320 83 ntBASIC1.74□□□□□ -2.13
SLC44A3Q8N4M1 AC107297.1-201ENST00000459991 176 ntBASIC1.74□□□□□ -2.13
SLC44A3Q8N4M1 RNU7-53P-201ENST00000516705 60 ntBASIC1.74□□□□□ -2.13
SLC44A3Q8N4M1 RNU6-537P-201ENST00000517277 103 ntBASIC1.74□□□□□ -2.13
SLC44A3Q8N4M1 AC068339.1-201ENST00000526965 141 ntBASIC1.74□□□□□ -2.13
SLC44A3Q8N4M1 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.74□□□□□ -2.13
SLC44A3Q8N4M1 MIR5009-201ENST00000578736 100 ntBASIC1.74□□□□□ -2.13
SLC44A3Q8N4M1 FAM106DP-201ENST00000586416 501 ntBASIC1.74□□□□□ -2.13
SLC44A3Q8N4M1 MIR4791-201ENST00000607666 84 ntBASIC1.74□□□□□ -2.13
SLC44A3Q8N4M1 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.74□□□□□ -2.13
SLC44A3Q8N4M1 RNU6-640P-201ENST00000363693 105 ntBASIC1.73□□□□□ -2.13
SLC44A3Q8N4M1 Y_RNA.171-201ENST00000363760 102 ntBASIC1.73□□□□□ -2.13
SLC44A3Q8N4M1 Y_RNA.348-201ENST00000365403 103 ntBASIC1.73□□□□□ -2.13
SLC44A3Q8N4M1 MIR653-201ENST00000385279 96 ntBASIC1.73□□□□□ -2.13
SLC44A3Q8N4M1 AL022718.1-201ENST00000412004 84 ntBASIC1.73□□□□□ -2.13
SLC44A3Q8N4M1 RNU6-958P-201ENST00000516995 106 ntBASIC1.73□□□□□ -2.13
SLC44A3Q8N4M1 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.73□□□□□ -2.13
SLC44A3Q8N4M1 MIR4419B-201ENST00000577260 68 ntBASIC1.73□□□□□ -2.13
SLC44A3Q8N4M1 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 194 ms