Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 RNU6-1289P-201ENST00000384431 106 ntBASIC0.01□□□□□ -2.41
NUDCD3Q8IVD9 U8.15-201ENST00000390947 134 ntBASIC0.01□□□□□ -2.41
NUDCD3Q8IVD9 RNA5SP261-201ENST00000410536 106 ntBASIC0.01□□□□□ -2.41
NUDCD3Q8IVD9 AC069271.1-201ENST00000445577 156 ntBASIC0.01□□□□□ -2.41
NUDCD3Q8IVD9 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.01□□□□□ -2.41
NUDCD3Q8IVD9 SNRPGP8-201ENST00000454064 226 ntBASIC0.01□□□□□ -2.41
NUDCD3Q8IVD9 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.01□□□□□ -2.41
NUDCD3Q8IVD9 MIR4801-201ENST00000582704 82 ntBASIC0.01□□□□□ -2.41
NUDCD3Q8IVD9 AC097639.2-201ENST00000603159 172 ntBASIC0.01□□□□□ -2.41
NUDCD3Q8IVD9 MIR6082-201ENST00000613604 109 ntBASIC0.01□□□□□ -2.41
NUDCD3Q8IVD9 SNORA42.1-201ENST00000363515 137 ntBASIC0□□□□□ -2.41
NUDCD3Q8IVD9 RNU6-1099P-201ENST00000363533 107 ntBASIC0□□□□□ -2.41
NUDCD3Q8IVD9 Y_RNA.152-201ENST00000363578 100 ntBASIC0□□□□□ -2.41
NUDCD3Q8IVD9 Y_RNA.210-201ENST00000364161 110 ntBASIC0□□□□□ -2.41
NUDCD3Q8IVD9 RNU6-474P-201ENST00000384243 107 ntBASIC0□□□□□ -2.41
NUDCD3Q8IVD9 MIR613-201ENST00000385248 95 ntBASIC0□□□□□ -2.41
NUDCD3Q8IVD9 RNU6-1228P-201ENST00000391014 107 ntBASIC0□□□□□ -2.41
NUDCD3Q8IVD9 SEPT7P4-201ENST00000437076 306 ntBASIC0□□□□□ -2.41
NUDCD3Q8IVD9 SERF1AP1-201ENST00000514575 187 ntBASIC0□□□□□ -2.41
NUDCD3Q8IVD9 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0□□□□□ -2.41
NUDCD3Q8IVD9 MIR7107-201ENST00000611489 80 ntBASIC0□□□□□ -2.41
NUDCD3Q8IVD9 MIR6718-201ENST00000616153 80 ntBASIC0□□□□□ -2.41
NUDCD3Q8IVD9 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.01□□□□□ -2.41
NUDCD3Q8IVD9 Y_RNA.64-201ENST00000362845 102 ntBASIC-0.01□□□□□ -2.41
NUDCD3Q8IVD9 SNORD114-9-201ENST00000364370 72 ntBASIC-0.01□□□□□ -2.41
NUDCD3Q8IVD9 Y_RNA.276-201ENST00000364732 109 ntBASIC-0.01□□□□□ -2.41
NUDCD3Q8IVD9 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.01□□□□□ -2.41
NUDCD3Q8IVD9 SUMO1P3-201ENST00000439961 304 ntBASIC-0.01□□□□□ -2.41
NUDCD3Q8IVD9 SNORA31.14-201ENST00000516728 116 ntBASIC-0.01□□□□□ -2.41
NUDCD3Q8IVD9 SCARNA24.2-201ENST00000516968 130 ntBASIC-0.01□□□□□ -2.41
NUDCD3Q8IVD9 RNU6-988P-201ENST00000519081 107 ntBASIC-0.01□□□□□ -2.41
NUDCD3Q8IVD9 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.01□□□□□ -2.41
NUDCD3Q8IVD9 MIR6755-201ENST00000619993 66 ntBASIC-0.01□□□□□ -2.41
NUDCD3Q8IVD9 Y_RNA.84-201ENST00000363011 104 ntBASIC-0.02□□□□□ -2.41
NUDCD3Q8IVD9 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.02□□□□□ -2.41
NUDCD3Q8IVD9 RNA5SP214-201ENST00000363378 118 ntBASIC-0.02□□□□□ -2.41
NUDCD3Q8IVD9 Y_RNA.275-201ENST00000364726 110 ntBASIC-0.02□□□□□ -2.41
NUDCD3Q8IVD9 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.02□□□□□ -2.41
NUDCD3Q8IVD9 RNY3P5-201ENST00000384127 102 ntBASIC-0.02□□□□□ -2.41
NUDCD3Q8IVD9 MTND5P22-201ENST00000458380 195 ntBASIC-0.02□□□□□ -2.41
NUDCD3Q8IVD9 AC141846.1-201ENST00000568348 142 ntBASIC-0.02□□□□□ -2.41
NUDCD3Q8IVD9 MIR4667-201ENST00000578933 66 ntBASIC-0.02□□□□□ -2.41
NUDCD3Q8IVD9 MIR3129-201ENST00000581095 76 ntBASIC-0.02□□□□□ -2.41
NUDCD3Q8IVD9 AC091932.4-201ENST00000623386 200 ntBASIC-0.02□□□□□ -2.41
NUDCD3Q8IVD9 MTND4P29-201ENST00000503122 1372 ntBASIC-0.03□□□□□ -2.41
NUDCD3Q8IVD9 AL596211.1-201ENST00000569873 2277 ntBASIC-0.03□□□□□ -2.41
NUDCD3Q8IVD9 SNORA9.1-201ENST00000362412 131 ntBASIC-0.03□□□□□ -2.41
NUDCD3Q8IVD9 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.03□□□□□ -2.41
NUDCD3Q8IVD9 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.03□□□□□ -2.41
NUDCD3Q8IVD9 snoU2_19.4-201ENST00000364329 80 ntBASIC-0.03□□□□□ -2.41
NUDCD3Q8IVD9 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.03□□□□□ -2.41
NUDCD3Q8IVD9 Y_RNA.455-201ENST00000384230 98 ntBASIC-0.03□□□□□ -2.41
NUDCD3Q8IVD9 Y_RNA.527-201ENST00000384573 102 ntBASIC-0.03□□□□□ -2.41
NUDCD3Q8IVD9 AL606845.1-201ENST00000404881 255 ntBASIC-0.03□□□□□ -2.41
NUDCD3Q8IVD9 AC096949.1-201ENST00000412047 152 ntBASIC-0.03□□□□□ -2.41
NUDCD3Q8IVD9 RNU7-80P-201ENST00000459562 61 ntBASIC-0.03□□□□□ -2.41
NUDCD3Q8IVD9 RNA5SP227-201ENST00000516184 113 ntBASIC-0.03□□□□□ -2.41
NUDCD3Q8IVD9 RNU6-453P-201ENST00000516819 85 ntBASIC-0.03□□□□□ -2.41
NUDCD3Q8IVD9 AC113195.1-201ENST00000579952 141 ntBASIC-0.03□□□□□ -2.41
NUDCD3Q8IVD9 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-0.03□□□□□ -2.41
NUDCD3Q8IVD9 MIR4491-201ENST00000581087 68 ntBASIC-0.03□□□□□ -2.41
NUDCD3Q8IVD9 MIR5197-201ENST00000583721 112 ntBASIC-0.03□□□□□ -2.41
NUDCD3Q8IVD9 MIR4768-201ENST00000585270 74 ntBASIC-0.03□□□□□ -2.41
NUDCD3Q8IVD9 AC104408.1-201ENST00000605241 170 ntBASIC-0.03□□□□□ -2.41
NUDCD3Q8IVD9 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-0.03□□□□□ -2.41
NUDCD3Q8IVD9 MIR6828-201ENST00000636181 60 ntBASIC-0.03□□□□□ -2.41
NUDCD3Q8IVD9 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.03□□□□□ -2.41
NUDCD3Q8IVD9 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.04□□□□□ -2.42
NUDCD3Q8IVD9 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.04□□□□□ -2.42
NUDCD3Q8IVD9 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.04□□□□□ -2.42
NUDCD3Q8IVD9 SNORA72.6-201ENST00000384520 129 ntBASIC-0.04□□□□□ -2.42
NUDCD3Q8IVD9 PCNPP3-201ENST00000393579 471 ntBASIC-0.04□□□□□ -2.42
NUDCD3Q8IVD9 AC022028.1-201ENST00000412054 408 ntBASIC-0.04□□□□□ -2.42
NUDCD3Q8IVD9 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.04□□□□□ -2.42
NUDCD3Q8IVD9 RNU6-1338P-201ENST00000516328 91 ntBASIC-0.04□□□□□ -2.42
NUDCD3Q8IVD9 RNU6-765P-201ENST00000516916 99 ntBASIC-0.04□□□□□ -2.42
NUDCD3Q8IVD9 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.04□□□□□ -2.42
NUDCD3Q8IVD9 MIR1273G-201ENST00000577677 100 ntBASIC-0.04□□□□□ -2.42
NUDCD3Q8IVD9 MIR3152-201ENST00000579801 74 ntBASIC-0.04□□□□□ -2.42
NUDCD3Q8IVD9 SNORA22B-201ENST00000383876 138 ntBASIC-0.05□□□□□ -2.42
NUDCD3Q8IVD9 RNU6-187P-201ENST00000384139 106 ntBASIC-0.05□□□□□ -2.42
NUDCD3Q8IVD9 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.05□□□□□ -2.42
NUDCD3Q8IVD9 RNU6-291P-201ENST00000384720 107 ntBASIC-0.05□□□□□ -2.42
NUDCD3Q8IVD9 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.05□□□□□ -2.42
NUDCD3Q8IVD9 RNU6-1143P-201ENST00000516125 104 ntBASIC-0.05□□□□□ -2.42
NUDCD3Q8IVD9 MIR6841-201ENST00000637129 72 ntBASIC-0.05□□□□□ -2.42
NUDCD3Q8IVD9 MIR411-201ENST00000362239 96 ntBASIC-0.06□□□□□ -2.42
NUDCD3Q8IVD9 SNORD114-16-201ENST00000363044 70 ntBASIC-0.06□□□□□ -2.42
NUDCD3Q8IVD9 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.06□□□□□ -2.42
NUDCD3Q8IVD9 Y_RNA.509-201ENST00000384506 99 ntBASIC-0.06□□□□□ -2.42
NUDCD3Q8IVD9 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.06□□□□□ -2.42
NUDCD3Q8IVD9 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.06□□□□□ -2.42
NUDCD3Q8IVD9 SNORA20-201ENST00000384662 132 ntBASIC-0.06□□□□□ -2.42
NUDCD3Q8IVD9 MIR616-201ENST00000385293 97 ntBASIC-0.06□□□□□ -2.42
NUDCD3Q8IVD9 RNU6-135P-201ENST00000516769 101 ntBASIC-0.06□□□□□ -2.42
NUDCD3Q8IVD9 RNA5SP47-201ENST00000517230 109 ntBASIC-0.06□□□□□ -2.42
NUDCD3Q8IVD9 MTND5P34-201ENST00000568888 325 ntBASIC-0.06□□□□□ -2.42
NUDCD3Q8IVD9 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.06□□□□□ -2.42
NUDCD3Q8IVD9 MIR330-201ENST00000362196 94 ntBASIC-0.07□□□□□ -2.42
NUDCD3Q8IVD9 SNORA22.1-201ENST00000362701 134 ntBASIC-0.07□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 169.7 ms