Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.02□□□□□ -1.93
SH3RF1Q7Z6J0 SNORA38-201ENST00000363946 132 ntBASIC3.01□□□□□ -1.93
SH3RF1Q7Z6J0 RNU6-342P-201ENST00000384521 104 ntBASIC3.01□□□□□ -1.93
SH3RF1Q7Z6J0 MIR660-201ENST00000385235 97 ntBASIC3.01□□□□□ -1.93
SH3RF1Q7Z6J0 RPL23AP6-201ENST00000446637 472 ntBASIC3.01□□□□□ -1.93
SH3RF1Q7Z6J0 AC125388.1-201ENST00000459631 156 ntBASIC3.01□□□□□ -1.93
SH3RF1Q7Z6J0 RN7SL499P-201ENST00000481141 276 ntBASIC3.01□□□□□ -1.93
SH3RF1Q7Z6J0 RNU6-917P-201ENST00000516294 104 ntBASIC3.01□□□□□ -1.93
SH3RF1Q7Z6J0 RNU7-153P-201ENST00000516455 62 ntBASIC3.01□□□□□ -1.93
SH3RF1Q7Z6J0 RNU7-35P-201ENST00000517174 62 ntBASIC3.01□□□□□ -1.93
SH3RF1Q7Z6J0 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
SH3RF1Q7Z6J0 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3□□□□□ -1.93
SH3RF1Q7Z6J0 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3□□□□□ -1.93
SH3RF1Q7Z6J0 SNORD114-30-201ENST00000364448 72 ntBASIC3□□□□□ -1.93
SH3RF1Q7Z6J0 SNORD38.2-201ENST00000384470 69 ntBASIC3□□□□□ -1.93
SH3RF1Q7Z6J0 MIR526A1-201ENST00000384897 85 ntBASIC3□□□□□ -1.93
SH3RF1Q7Z6J0 MIR764-201ENST00000390811 85 ntBASIC3□□□□□ -1.93
SH3RF1Q7Z6J0 RNA5SP465-201ENST00000391195 109 ntBASIC3□□□□□ -1.93
SH3RF1Q7Z6J0 MIR1265-201ENST00000408444 86 ntBASIC3□□□□□ -1.93
SH3RF1Q7Z6J0 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3□□□□□ -1.93
SH3RF1Q7Z6J0 RNA5SP137-201ENST00000516833 135 ntBASIC3□□□□□ -1.93
SH3RF1Q7Z6J0 AC021506.2-201ENST00000612354 169 ntBASIC3□□□□□ -1.93
SH3RF1Q7Z6J0 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3□□□□□ -1.93
SH3RF1Q7Z6J0 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SH3RF1Q7Z6J0 Y_RNA.448-201ENST00000384185 108 ntBASIC2.99□□□□□ -1.93
SH3RF1Q7Z6J0 RNU6-1086P-201ENST00000410930 100 ntBASIC2.99□□□□□ -1.93
SH3RF1Q7Z6J0 RNA5SP492-201ENST00000411330 114 ntBASIC2.99□□□□□ -1.93
SH3RF1Q7Z6J0 AC087499.7-201ENST00000441958 109 ntBASIC2.99□□□□□ -1.93
SH3RF1Q7Z6J0 AL450471.1-201ENST00000447509 127 ntBASIC2.99□□□□□ -1.93
SH3RF1Q7Z6J0 snoU13.27-201ENST00000459278 104 ntBASIC2.99□□□□□ -1.93
SH3RF1Q7Z6J0 RNA5SP481-201ENST00000516814 122 ntBASIC2.99□□□□□ -1.93
SH3RF1Q7Z6J0 MIR3134-201ENST00000579433 74 ntBASIC2.99□□□□□ -1.93
SH3RF1Q7Z6J0 FAM106DP-201ENST00000586416 501 ntBASIC2.99□□□□□ -1.93
SH3RF1Q7Z6J0 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.99□□□□□ -1.93
SH3RF1Q7Z6J0 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
SH3RF1Q7Z6J0 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.99□□□□□ -1.93
SH3RF1Q7Z6J0 Y_RNA.340-201ENST00000365330 92 ntBASIC2.98□□□□□ -1.93
SH3RF1Q7Z6J0 MIR181B2-201ENST00000385004 89 ntBASIC2.98□□□□□ -1.93
SH3RF1Q7Z6J0 MIR1236-201ENST00000408340 102 ntBASIC2.98□□□□□ -1.93
SH3RF1Q7Z6J0 RNU6-447P-201ENST00000410293 104 ntBASIC2.98□□□□□ -1.93
SH3RF1Q7Z6J0 RNU6-1118P-201ENST00000410382 104 ntBASIC2.98□□□□□ -1.93
SH3RF1Q7Z6J0 RNU6-1076P-201ENST00000410397 104 ntBASIC2.98□□□□□ -1.93
SH3RF1Q7Z6J0 RNU6-355P-201ENST00000410427 104 ntBASIC2.98□□□□□ -1.93
SH3RF1Q7Z6J0 RNU6-791P-201ENST00000410467 104 ntBASIC2.98□□□□□ -1.93
SH3RF1Q7Z6J0 RNU6-705P-201ENST00000410601 104 ntBASIC2.98□□□□□ -1.93
SH3RF1Q7Z6J0 RNU6-1100P-201ENST00000410691 104 ntBASIC2.98□□□□□ -1.93
SH3RF1Q7Z6J0 RNU6-860P-201ENST00000410860 104 ntBASIC2.98□□□□□ -1.93
SH3RF1Q7Z6J0 RNU6-1217P-201ENST00000411276 104 ntBASIC2.98□□□□□ -1.93
SH3RF1Q7Z6J0 RNU6-785P-201ENST00000411324 104 ntBASIC2.98□□□□□ -1.93
SH3RF1Q7Z6J0 HMGN2P3-201ENST00000433603 273 ntBASIC2.98□□□□□ -1.93
SH3RF1Q7Z6J0 HMGN2P5-201ENST00000436882 273 ntBASIC2.98□□□□□ -1.93
SH3RF1Q7Z6J0 SPINT5P-201ENST00000448174 155 ntBASIC2.98□□□□□ -1.93
SH3RF1Q7Z6J0 RNU6-557P-201ENST00000516842 110 ntBASIC2.98□□□□□ -1.93
SH3RF1Q7Z6J0 MIR8055-201ENST00000610739 97 ntBASIC2.98□□□□□ -1.93
SH3RF1Q7Z6J0 U6.90-201ENST00000614007 104 ntBASIC2.98□□□□□ -1.93
SH3RF1Q7Z6J0 U6.70-201ENST00000620287 104 ntBASIC2.98□□□□□ -1.93
SH3RF1Q7Z6J0 AC131280.1-202ENST00000624067 4211 ntBASIC2.98□□□□□ -1.93
SH3RF1Q7Z6J0 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SH3RF1Q7Z6J0 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
SH3RF1Q7Z6J0 RNU1-148P-201ENST00000384472 162 ntBASIC2.97□□□□□ -1.93
SH3RF1Q7Z6J0 MIR1289-2-201ENST00000408360 111 ntBASIC2.97□□□□□ -1.93
SH3RF1Q7Z6J0 snoU13.23-201ENST00000458863 104 ntBASIC2.97□□□□□ -1.93
SH3RF1Q7Z6J0 RNU7-26P-201ENST00000458980 63 ntBASIC2.97□□□□□ -1.93
SH3RF1Q7Z6J0 AC234781.5-201ENST00000508429 271 ntBASIC2.97□□□□□ -1.93
SH3RF1Q7Z6J0 SNORD67.1-201ENST00000516618 108 ntBASIC2.97□□□□□ -1.93
SH3RF1Q7Z6J0 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.97□□□□□ -1.93
SH3RF1Q7Z6J0 MIR4635-201ENST00000583759 79 ntBASIC2.97□□□□□ -1.93
SH3RF1Q7Z6J0 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SH3RF1Q7Z6J0 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.97□□□□□ -1.93
SH3RF1Q7Z6J0 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
SH3RF1Q7Z6J0 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.97□□□□□ -1.93
SH3RF1Q7Z6J0 AL161431.1-201ENST00000618966 4205 ntBASIC2.97□□□□□ -1.93
SH3RF1Q7Z6J0 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
SH3RF1Q7Z6J0 MIRLET7A1-201ENST00000362295 80 ntBASIC2.96□□□□□ -1.94
SH3RF1Q7Z6J0 SCARNA18B-201ENST00000458806 135 ntBASIC2.96□□□□□ -1.94
SH3RF1Q7Z6J0 RNU7-79P-201ENST00000516082 62 ntBASIC2.96□□□□□ -1.94
SH3RF1Q7Z6J0 RNVU1-2-201ENST00000516326 135 ntBASIC2.96□□□□□ -1.94
SH3RF1Q7Z6J0 RNA5SP282-201ENST00000516355 108 ntBASIC2.96□□□□□ -1.94
SH3RF1Q7Z6J0 RNU7-43P-201ENST00000516554 64 ntBASIC2.96□□□□□ -1.94
SH3RF1Q7Z6J0 RNA5SP437-201ENST00000517249 129 ntBASIC2.96□□□□□ -1.94
SH3RF1Q7Z6J0 AC015712.3-201ENST00000559380 164 ntBASIC2.96□□□□□ -1.94
SH3RF1Q7Z6J0 CYP3A52P-201ENST00000563326 91 ntBASIC2.96□□□□□ -1.94
SH3RF1Q7Z6J0 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
SH3RF1Q7Z6J0 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
SH3RF1Q7Z6J0 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SH3RF1Q7Z6J0 RNU4-32P-201ENST00000363404 141 ntBASIC2.95□□□□□ -1.94
SH3RF1Q7Z6J0 RNU6-480P-201ENST00000384332 107 ntBASIC2.95□□□□□ -1.94
SH3RF1Q7Z6J0 RNU6-411P-201ENST00000384451 107 ntBASIC2.95□□□□□ -1.94
SH3RF1Q7Z6J0 SNORA48.1-201ENST00000390879 135 ntBASIC2.95□□□□□ -1.94
SH3RF1Q7Z6J0 AL023284.1-201ENST00000403956 276 ntBASIC2.95□□□□□ -1.94
SH3RF1Q7Z6J0 MIR1283-2-201ENST00000408621 87 ntBASIC2.95□□□□□ -1.94
SH3RF1Q7Z6J0 RNU6-519P-201ENST00000410590 108 ntBASIC2.95□□□□□ -1.94
SH3RF1Q7Z6J0 SNORA74.3-201ENST00000517108 154 ntBASIC2.95□□□□□ -1.94
SH3RF1Q7Z6J0 MTND5P40-201ENST00000559945 246 ntBASIC2.95□□□□□ -1.94
SH3RF1Q7Z6J0 AC012676.2-201ENST00000619258 186 ntBASIC2.95□□□□□ -1.94
SH3RF1Q7Z6J0 Y_RNA.98-201ENST00000363109 102 ntBASIC2.94□□□□□ -1.94
SH3RF1Q7Z6J0 RNA5SP133-201ENST00000363368 119 ntBASIC2.94□□□□□ -1.94
SH3RF1Q7Z6J0 SNORD114-10-201ENST00000363409 72 ntBASIC2.94□□□□□ -1.94
SH3RF1Q7Z6J0 SNORA2B-201ENST00000384583 137 ntBASIC2.94□□□□□ -1.94
SH3RF1Q7Z6J0 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms