Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 U6.90-201ENST00000614007 104 ntBASIC0.28□□□□□ -2.36
ATL3Q6DD88 U6.70-201ENST00000620287 104 ntBASIC0.28□□□□□ -2.36
ATL3Q6DD88 Y_RNA.117-201ENST00000363294 101 ntBASIC0.27□□□□□ -2.37
ATL3Q6DD88 RNU6-1189P-201ENST00000383958 107 ntBASIC0.27□□□□□ -2.37
ATL3Q6DD88 MIR548I3-201ENST00000408378 149 ntBASIC0.27□□□□□ -2.37
ATL3Q6DD88 AL138752.1-201ENST00000452964 351 ntBASIC0.27□□□□□ -2.37
ATL3Q6DD88 SNORD2.1-201ENST00000458762 69 ntBASIC0.27□□□□□ -2.37
ATL3Q6DD88 SCARNA24.2-201ENST00000516968 130 ntBASIC0.27□□□□□ -2.37
ATL3Q6DD88 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.27□□□□□ -2.37
ATL3Q6DD88 AP001094.1-201ENST00000579805 193 ntBASIC0.27□□□□□ -2.37
ATL3Q6DD88 MIR4305-201ENST00000583252 102 ntBASIC0.27□□□□□ -2.37
ATL3Q6DD88 AC078938.1-201ENST00000620993 318 ntBASIC0.27□□□□□ -2.37
ATL3Q6DD88 AC092634.7-201ENST00000621022 103 ntBASIC0.27□□□□□ -2.37
ATL3Q6DD88 MIR6717-201ENST00000622747 73 ntBASIC0.27□□□□□ -2.37
ATL3Q6DD88 MIR376A2-201ENST00000636782 80 ntBASIC0.27□□□□□ -2.37
ATL3Q6DD88 Y_RNA.152-201ENST00000363578 100 ntBASIC0.26□□□□□ -2.37
ATL3Q6DD88 snoU2_19.4-201ENST00000364329 80 ntBASIC0.26□□□□□ -2.37
ATL3Q6DD88 SNORA1-201ENST00000384107 130 ntBASIC0.26□□□□□ -2.37
ATL3Q6DD88 RNU6-364P-201ENST00000384387 107 ntBASIC0.26□□□□□ -2.37
ATL3Q6DD88 MIR518A1-201ENST00000385068 85 ntBASIC0.26□□□□□ -2.37
ATL3Q6DD88 MT-TF-201ENST00000387314 71 ntBASIC0.26□□□□□ -2.37
ATL3Q6DD88 RNU6-679P-201ENST00000391003 106 ntBASIC0.26□□□□□ -2.37
ATL3Q6DD88 SNORA26-201ENST00000391286 122 ntBASIC0.26□□□□□ -2.37
ATL3Q6DD88 RNU6-651P-201ENST00000411040 105 ntBASIC0.26□□□□□ -2.37
ATL3Q6DD88 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.26□□□□□ -2.37
ATL3Q6DD88 RNU6-453P-201ENST00000516819 85 ntBASIC0.26□□□□□ -2.37
ATL3Q6DD88 MIR5093-201ENST00000583199 100 ntBASIC0.26□□□□□ -2.37
ATL3Q6DD88 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.26□□□□□ -2.37
ATL3Q6DD88 MIR103A1-201ENST00000362165 78 ntBASIC0.25□□□□□ -2.37
ATL3Q6DD88 RNU4-67P-201ENST00000364569 141 ntBASIC0.25□□□□□ -2.37
ATL3Q6DD88 RNU6-740P-201ENST00000364734 105 ntBASIC0.25□□□□□ -2.37
ATL3Q6DD88 RNU5E-4P-201ENST00000364931 120 ntBASIC0.25□□□□□ -2.37
ATL3Q6DD88 RNU6-985P-201ENST00000410182 104 ntBASIC0.25□□□□□ -2.37
ATL3Q6DD88 RNA5SP285-201ENST00000516619 119 ntBASIC0.25□□□□□ -2.37
ATL3Q6DD88 RNA5SP94-201ENST00000516917 108 ntBASIC0.25□□□□□ -2.37
ATL3Q6DD88 AC023932.2-201ENST00000603176 175 ntBASIC0.25□□□□□ -2.37
ATL3Q6DD88 AP001282.2-201ENST00000616149 309 ntBASIC0.25□□□□□ -2.37
ATL3Q6DD88 Y_RNA.23-201ENST00000362496 106 ntBASIC0.24□□□□□ -2.37
ATL3Q6DD88 Y_RNA.82-201ENST00000363000 102 ntBASIC0.24□□□□□ -2.37
ATL3Q6DD88 Y_RNA.92-201ENST00000363043 102 ntBASIC0.24□□□□□ -2.37
ATL3Q6DD88 SNORD118-201ENST00000363593 134 ntBASIC0.24□□□□□ -2.37
ATL3Q6DD88 Y_RNA.235-201ENST00000364412 102 ntBASIC0.24□□□□□ -2.37
ATL3Q6DD88 RNU6-867P-201ENST00000364956 107 ntBASIC0.24□□□□□ -2.37
ATL3Q6DD88 Y_RNA.304-201ENST00000365011 112 ntBASIC0.24□□□□□ -2.37
ATL3Q6DD88 Y_RNA.306-201ENST00000365015 102 ntBASIC0.24□□□□□ -2.37
ATL3Q6DD88 Y_RNA.312-201ENST00000365089 102 ntBASIC0.24□□□□□ -2.37
ATL3Q6DD88 Y_RNA.322-201ENST00000365151 102 ntBASIC0.24□□□□□ -2.37
ATL3Q6DD88 RNU6-35P-201ENST00000384530 107 ntBASIC0.24□□□□□ -2.37
ATL3Q6DD88 MIR616-201ENST00000385293 97 ntBASIC0.24□□□□□ -2.37
ATL3Q6DD88 MIR1257-201ENST00000408490 117 ntBASIC0.24□□□□□ -2.37
ATL3Q6DD88 SNORA40.8-201ENST00000411034 126 ntBASIC0.24□□□□□ -2.37
ATL3Q6DD88 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.24□□□□□ -2.37
ATL3Q6DD88 MTCYBP6-201ENST00000441810 138 ntBASIC0.24□□□□□ -2.37
ATL3Q6DD88 Y_RNA.650-201ENST00000459002 102 ntBASIC0.24□□□□□ -2.37
ATL3Q6DD88 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.24□□□□□ -2.37
ATL3Q6DD88 RNA5SP395-201ENST00000516567 118 ntBASIC0.24□□□□□ -2.37
ATL3Q6DD88 Y_RNA.777-201ENST00000516982 102 ntBASIC0.24□□□□□ -2.37
ATL3Q6DD88 RNU6-448P-201ENST00000517052 107 ntBASIC0.24□□□□□ -2.37
ATL3Q6DD88 AP003327.1-201ENST00000529684 127 ntBASIC0.24□□□□□ -2.37
ATL3Q6DD88 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.24□□□□□ -2.37
ATL3Q6DD88 MIR3678-201ENST00000578455 94 ntBASIC0.24□□□□□ -2.37
ATL3Q6DD88 Y_RNA.771-201ENST00000598668 102 ntBASIC0.24□□□□□ -2.37
ATL3Q6DD88 Y_RNA.789-201ENST00000622480 102 ntBASIC0.24□□□□□ -2.37
ATL3Q6DD88 Y_RNA.7-201ENST00000362352 102 ntBASIC0.23□□□□□ -2.37
ATL3Q6DD88 Y_RNA.44-201ENST00000362676 108 ntBASIC0.23□□□□□ -2.37
ATL3Q6DD88 Y_RNA.412-201ENST00000384001 104 ntBASIC0.23□□□□□ -2.37
ATL3Q6DD88 Y_RNA.432-201ENST00000384087 111 ntBASIC0.23□□□□□ -2.37
ATL3Q6DD88 RNU6-1228P-201ENST00000391014 107 ntBASIC0.23□□□□□ -2.37
ATL3Q6DD88 AL606845.1-201ENST00000404881 255 ntBASIC0.23□□□□□ -2.37
ATL3Q6DD88 RNU2-70P-201ENST00000410718 179 ntBASIC0.23□□□□□ -2.37
ATL3Q6DD88 RNU7-45P-201ENST00000459460 63 ntBASIC0.23□□□□□ -2.37
ATL3Q6DD88 SNORA25.12-201ENST00000516202 82 ntBASIC0.23□□□□□ -2.37
ATL3Q6DD88 MIR4282-201ENST00000583613 67 ntBASIC0.23□□□□□ -2.37
ATL3Q6DD88 MIR8066-201ENST00000617280 78 ntBASIC0.23□□□□□ -2.37
ATL3Q6DD88 Y_RNA.202-201ENST00000364083 110 ntBASIC0.22□□□□□ -2.37
ATL3Q6DD88 Y_RNA.351-201ENST00000365436 96 ntBASIC0.22□□□□□ -2.37
ATL3Q6DD88 Y_RNA.430-201ENST00000384081 110 ntBASIC0.22□□□□□ -2.37
ATL3Q6DD88 RNU6-1109P-201ENST00000391187 107 ntBASIC0.22□□□□□ -2.37
ATL3Q6DD88 Y_RNA.622-201ENST00000411091 108 ntBASIC0.22□□□□□ -2.37
ATL3Q6DD88 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.22□□□□□ -2.37
ATL3Q6DD88 Y_RNA.42-201ENST00000362660 108 ntBASIC0.21□□□□□ -2.38
ATL3Q6DD88 Y_RNA.237-201ENST00000364439 102 ntBASIC0.21□□□□□ -2.38
ATL3Q6DD88 SNRPGP12-201ENST00000449481 213 ntBASIC0.21□□□□□ -2.38
ATL3Q6DD88 RNU6-561P-201ENST00000516222 102 ntBASIC0.21□□□□□ -2.38
ATL3Q6DD88 AC022523.2-201ENST00000561045 150 ntBASIC0.21□□□□□ -2.38
ATL3Q6DD88 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.21□□□□□ -2.38
ATL3Q6DD88 MIR342-201ENST00000362212 99 ntBASIC0.2□□□□□ -2.38
ATL3Q6DD88 SNORA36.1-201ENST00000363424 132 ntBASIC0.2□□□□□ -2.38
ATL3Q6DD88 RNA5SP117-201ENST00000365294 118 ntBASIC0.2□□□□□ -2.38
ATL3Q6DD88 SNORA33.2-201ENST00000365413 134 ntBASIC0.2□□□□□ -2.38
ATL3Q6DD88 RNU6-597P-201ENST00000365620 102 ntBASIC0.2□□□□□ -2.38
ATL3Q6DD88 RNU6-1292P-201ENST00000383856 107 ntBASIC0.2□□□□□ -2.38
ATL3Q6DD88 AC096949.1-201ENST00000412047 152 ntBASIC0.2□□□□□ -2.38
ATL3Q6DD88 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.2□□□□□ -2.38
ATL3Q6DD88 RNU6-863P-201ENST00000515989 104 ntBASIC0.2□□□□□ -2.38
ATL3Q6DD88 RNU6-570P-201ENST00000517051 105 ntBASIC0.2□□□□□ -2.38
ATL3Q6DD88 uc_338.16-201ENST00000621804 95 ntBASIC0.2□□□□□ -2.38
ATL3Q6DD88 MIR335-201ENST00000362173 94 ntBASIC0.19□□□□□ -2.38
ATL3Q6DD88 RNU6-349P-201ENST00000362402 107 ntBASIC0.19□□□□□ -2.38
ATL3Q6DD88 RNU6-653P-201ENST00000363074 106 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 315.7 ms