Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 RNY1-201ENST00000364228 113 ntBASIC0.27□□□□□ -2.37
RFX4Q33E94 MT-TF-201ENST00000387314 71 ntBASIC0.27□□□□□ -2.37
RFX4Q33E94 RNU6-1319P-201ENST00000390855 104 ntBASIC0.27□□□□□ -2.37
RFX4Q33E94 RNU6-747P-201ENST00000390928 104 ntBASIC0.27□□□□□ -2.37
RFX4Q33E94 RNU6-241P-201ENST00000391148 104 ntBASIC0.27□□□□□ -2.37
RFX4Q33E94 RNU6-447P-201ENST00000410293 104 ntBASIC0.27□□□□□ -2.37
RFX4Q33E94 RNU6-1118P-201ENST00000410382 104 ntBASIC0.27□□□□□ -2.37
RFX4Q33E94 RNU6-1076P-201ENST00000410397 104 ntBASIC0.27□□□□□ -2.37
RFX4Q33E94 RNU6-355P-201ENST00000410427 104 ntBASIC0.27□□□□□ -2.37
RFX4Q33E94 RNU6-791P-201ENST00000410467 104 ntBASIC0.27□□□□□ -2.37
RFX4Q33E94 RNU6-705P-201ENST00000410601 104 ntBASIC0.27□□□□□ -2.37
RFX4Q33E94 RNU6-1100P-201ENST00000410691 104 ntBASIC0.27□□□□□ -2.37
RFX4Q33E94 RNU6-860P-201ENST00000410860 104 ntBASIC0.27□□□□□ -2.37
RFX4Q33E94 RNU6-1217P-201ENST00000411276 104 ntBASIC0.27□□□□□ -2.37
RFX4Q33E94 RNU6-785P-201ENST00000411324 104 ntBASIC0.27□□□□□ -2.37
RFX4Q33E94 RNA5SP94-201ENST00000516917 108 ntBASIC0.27□□□□□ -2.37
RFX4Q33E94 MIR4643-201ENST00000577473 78 ntBASIC0.27□□□□□ -2.37
RFX4Q33E94 MIR3129-201ENST00000581095 76 ntBASIC0.27□□□□□ -2.37
RFX4Q33E94 U6.90-201ENST00000614007 104 ntBASIC0.27□□□□□ -2.37
RFX4Q33E94 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.27□□□□□ -2.37
RFX4Q33E94 U6.70-201ENST00000620287 104 ntBASIC0.27□□□□□ -2.37
RFX4Q33E94 AL589743.1-201ENST00000551932 2712 ntBASIC0.27□□□□□ -2.37
RFX4Q33E94 MIR103A1-201ENST00000362165 78 ntBASIC0.26□□□□□ -2.37
RFX4Q33E94 MIR335-201ENST00000362173 94 ntBASIC0.26□□□□□ -2.37
RFX4Q33E94 Y_RNA.199-201ENST00000364014 102 ntBASIC0.26□□□□□ -2.37
RFX4Q33E94 Y_RNA.351-201ENST00000365436 96 ntBASIC0.26□□□□□ -2.37
RFX4Q33E94 RNU6-1227P-201ENST00000383981 107 ntBASIC0.26□□□□□ -2.37
RFX4Q33E94 Y_RNA.416-201ENST00000384014 113 ntBASIC0.26□□□□□ -2.37
RFX4Q33E94 RNA5SP134-201ENST00000516492 96 ntBASIC0.26□□□□□ -2.37
RFX4Q33E94 MIR5197-201ENST00000583721 112 ntBASIC0.26□□□□□ -2.37
RFX4Q33E94 AC011921.3-201ENST00000605540 361 ntBASIC0.26□□□□□ -2.37
RFX4Q33E94 MIR8066-201ENST00000617280 78 ntBASIC0.26□□□□□ -2.37
RFX4Q33E94 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.26□□□□□ -2.37
RFX4Q33E94 AC090625.1-201ENST00000357130 210 ntBASIC0.25□□□□□ -2.37
RFX4Q33E94 MIR302B-201ENST00000362188 73 ntBASIC0.25□□□□□ -2.37
RFX4Q33E94 RNU6-472P-201ENST00000384299 107 ntBASIC0.25□□□□□ -2.37
RFX4Q33E94 Y_RNA.518-201ENST00000384552 113 ntBASIC0.25□□□□□ -2.37
RFX4Q33E94 RNU6-713P-201ENST00000384761 107 ntBASIC0.25□□□□□ -2.37
RFX4Q33E94 Y_RNA.590-201ENST00000410140 107 ntBASIC0.25□□□□□ -2.37
RFX4Q33E94 RNA5SP193-201ENST00000410353 107 ntBASIC0.25□□□□□ -2.37
RFX4Q33E94 RNA5SP261-201ENST00000410536 106 ntBASIC0.25□□□□□ -2.37
RFX4Q33E94 RNA5SP436-201ENST00000516020 115 ntBASIC0.25□□□□□ -2.37
RFX4Q33E94 RNU6-635P-201ENST00000516651 102 ntBASIC0.25□□□□□ -2.37
RFX4Q33E94 AL442067.1-201ENST00000613261 223 ntBASIC0.25□□□□□ -2.37
RFX4Q33E94 uc_338.16-201ENST00000621804 95 ntBASIC0.25□□□□□ -2.37
RFX4Q33E94 AC091932.4-201ENST00000623386 200 ntBASIC0.25□□□□□ -2.37
RFX4Q33E94 Y_RNA.42-201ENST00000362660 108 ntBASIC0.24□□□□□ -2.37
RFX4Q33E94 SNORD44.1-201ENST00000363202 61 ntBASIC0.24□□□□□ -2.37
RFX4Q33E94 MIR518A1-201ENST00000385068 85 ntBASIC0.24□□□□□ -2.37
RFX4Q33E94 SNORD71-201ENST00000411292 86 ntBASIC0.24□□□□□ -2.37
RFX4Q33E94 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.24□□□□□ -2.37
RFX4Q33E94 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.24□□□□□ -2.37
RFX4Q33E94 AC108740.1-201ENST00000498629 225 ntBASIC0.24□□□□□ -2.37
RFX4Q33E94 RNU6-448P-201ENST00000517052 107 ntBASIC0.24□□□□□ -2.37
RFX4Q33E94 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.24□□□□□ -2.37
RFX4Q33E94 MIR3678-201ENST00000578455 94 ntBASIC0.24□□□□□ -2.37
RFX4Q33E94 AC044792.1-201ENST00000593294 196 ntBASIC0.24□□□□□ -2.37
RFX4Q33E94 SNORA25.18-201ENST00000607153 114 ntBASIC0.24□□□□□ -2.37
RFX4Q33E94 AL662814.1-201ENST00000617364 121 ntBASIC0.24□□□□□ -2.37
RFX4Q33E94 MIR8062-201ENST00000621515 85 ntBASIC0.24□□□□□ -2.37
RFX4Q33E94 Y_RNA.76-201ENST00000362931 109 ntBASIC0.23□□□□□ -2.37
RFX4Q33E94 RNU6-238P-201ENST00000363313 106 ntBASIC0.23□□□□□ -2.37
RFX4Q33E94 SNORD114-23-201ENST00000363536 72 ntBASIC0.23□□□□□ -2.37
RFX4Q33E94 Y_RNA.176-201ENST00000363815 109 ntBASIC0.23□□□□□ -2.37
RFX4Q33E94 Y_RNA.461-201ENST00000384263 103 ntBASIC0.23□□□□□ -2.37
RFX4Q33E94 Y_RNA.542-201ENST00000384641 111 ntBASIC0.23□□□□□ -2.37
RFX4Q33E94 MIR216A-201ENST00000385063 110 ntBASIC0.23□□□□□ -2.37
RFX4Q33E94 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.23□□□□□ -2.37
RFX4Q33E94 SNORD93-201ENST00000408813 74 ntBASIC0.23□□□□□ -2.37
RFX4Q33E94 Y_RNA.617-201ENST00000410920 90 ntBASIC0.23□□□□□ -2.37
RFX4Q33E94 SNORA40.8-201ENST00000411034 126 ntBASIC0.23□□□□□ -2.37
RFX4Q33E94 AC096949.1-201ENST00000412047 152 ntBASIC0.23□□□□□ -2.37
RFX4Q33E94 Y_RNA.673-201ENST00000516306 88 ntBASIC0.23□□□□□ -2.37
RFX4Q33E94 Y_RNA.679-201ENST00000516416 91 ntBASIC0.23□□□□□ -2.37
RFX4Q33E94 MIR6841-201ENST00000637129 72 ntBASIC0.23□□□□□ -2.37
RFX4Q33E94 AL596211.1-201ENST00000569873 2277 ntBASIC0.22□□□□□ -2.37
RFX4Q33E94 RNA5SP117-201ENST00000365294 118 ntBASIC0.22□□□□□ -2.37
RFX4Q33E94 RNU4-17P-201ENST00000365598 141 ntBASIC0.22□□□□□ -2.37
RFX4Q33E94 Y_RNA.430-201ENST00000384081 110 ntBASIC0.22□□□□□ -2.37
RFX4Q33E94 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
RFX4Q33E94 U8.15-201ENST00000390947 134 ntBASIC0.22□□□□□ -2.37
RFX4Q33E94 MIR548F4-201ENST00000408515 105 ntBASIC0.22□□□□□ -2.37
RFX4Q33E94 RNU4-43P-201ENST00000410628 137 ntBASIC0.22□□□□□ -2.37
RFX4Q33E94 RPL39P25-201ENST00000449384 154 ntBASIC0.22□□□□□ -2.37
RFX4Q33E94 SNORA25.12-201ENST00000516202 82 ntBASIC0.22□□□□□ -2.37
RFX4Q33E94 AC133485.4-201ENST00000561835 220 ntBASIC0.22□□□□□ -2.37
RFX4Q33E94 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
RFX4Q33E94 AL365205.2-201ENST00000594586 68 ntBASIC0.22□□□□□ -2.37
RFX4Q33E94 Y_RNA.118-201ENST00000363300 101 ntBASIC0.21□□□□□ -2.38
RFX4Q33E94 SNORA36.1-201ENST00000363424 132 ntBASIC0.21□□□□□ -2.38
RFX4Q33E94 SNORD118-201ENST00000363593 134 ntBASIC0.21□□□□□ -2.38
RFX4Q33E94 RNU6-1292P-201ENST00000383856 107 ntBASIC0.21□□□□□ -2.38
RFX4Q33E94 Y_RNA.454-201ENST00000384224 113 ntBASIC0.21□□□□□ -2.38
RFX4Q33E94 SNORA8.2-201ENST00000384372 139 ntBASIC0.21□□□□□ -2.38
RFX4Q33E94 Y_RNA.588-201ENST00000391254 102 ntBASIC0.21□□□□□ -2.38
RFX4Q33E94 SNORA79-201ENST00000408376 140 ntBASIC0.21□□□□□ -2.38
RFX4Q33E94 RNU4-83P-201ENST00000410863 133 ntBASIC0.21□□□□□ -2.38
RFX4Q33E94 Y_RNA.618-201ENST00000410949 107 ntBASIC0.21□□□□□ -2.38
RFX4Q33E94 SEPT7P4-201ENST00000437076 306 ntBASIC0.21□□□□□ -2.38
RFX4Q33E94 SNRPGP12-201ENST00000449481 213 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 168 ms