Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 SNORA17.3-201ENST00000391159 129 ntBASIC1.32□□□□□ -2.2
RAE1P78406 RPS3AP1-201ENST00000413190 320 ntBASIC1.32□□□□□ -2.2
RAE1P78406 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.32□□□□□ -2.2
RAE1P78406 RNU1-98P-201ENST00000458992 160 ntBASIC1.32□□□□□ -2.2
RAE1P78406 MIR2115-201ENST00000516657 100 ntBASIC1.32□□□□□ -2.2
RAE1P78406 AC108081.1-201ENST00000604358 221 ntBASIC1.32□□□□□ -2.2
RAE1P78406 SNORA22.1-201ENST00000362701 134 ntBASIC1.31□□□□□ -2.2
RAE1P78406 RNU6-396P-201ENST00000365369 105 ntBASIC1.31□□□□□ -2.2
RAE1P78406 Y_RNA.366-201ENST00000365540 102 ntBASIC1.31□□□□□ -2.2
RAE1P78406 RNA5SP144-201ENST00000410846 116 ntBASIC1.31□□□□□ -2.2
RAE1P78406 AC090844.1-201ENST00000422019 156 ntBASIC1.31□□□□□ -2.2
RAE1P78406 RNU6-1211P-201ENST00000459179 105 ntBASIC1.31□□□□□ -2.2
RAE1P78406 AC021443.1-201ENST00000604478 211 ntBASIC1.31□□□□□ -2.2
RAE1P78406 AL353997.5-201ENST00000618886 171 ntBASIC1.31□□□□□ -2.2
RAE1P78406 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.31□□□□□ -2.2
RAE1P78406 SNORD113-1-201ENST00000365321 69 ntBASIC1.3□□□□□ -2.2
RAE1P78406 Y_RNA.354-201ENST00000365448 111 ntBASIC1.3□□□□□ -2.2
RAE1P78406 RNU6-80P-201ENST00000384195 107 ntBASIC1.3□□□□□ -2.2
RAE1P78406 RNU6-959P-201ENST00000384671 107 ntBASIC1.3□□□□□ -2.2
RAE1P78406 MT-TN-201ENST00000387400 73 ntBASIC1.3□□□□□ -2.2
RAE1P78406 RNU6-482P-201ENST00000391068 107 ntBASIC1.3□□□□□ -2.2
RAE1P78406 RNU6-602P-201ENST00000411155 105 ntBASIC1.3□□□□□ -2.2
RAE1P78406 POLR2J4-204ENST00000418424 324 ntBASIC1.3□□□□□ -2.2
RAE1P78406 RNU6-237P-201ENST00000515985 71 ntBASIC1.3□□□□□ -2.2
RAE1P78406 AC068338.1-201ENST00000565567 176 ntBASIC1.3□□□□□ -2.2
RAE1P78406 MIR4305-201ENST00000583252 102 ntBASIC1.3□□□□□ -2.2
RAE1P78406 MIR4769-201ENST00000584126 77 ntBASIC1.3□□□□□ -2.2
RAE1P78406 MIR7974-201ENST00000615835 79 ntBASIC1.3□□□□□ -2.2
RAE1P78406 AL137067.1-201ENST00000615933 120 ntBASIC1.3□□□□□ -2.2
RAE1P78406 Y_RNA.617-201ENST00000410920 90 ntBASIC1.29□□□□□ -2.2
RAE1P78406 MIR6516-201ENST00000630554 81 ntBASIC1.29□□□□□ -2.2
RAE1P78406 MIR377-201ENST00000362145 69 ntBASIC1.28□□□□□ -2.2
RAE1P78406 RNU6-235P-201ENST00000362644 107 ntBASIC1.28□□□□□ -2.2
RAE1P78406 Y_RNA.218-201ENST00000364218 104 ntBASIC1.28□□□□□ -2.2
RAE1P78406 Y_RNA.363-201ENST00000365529 113 ntBASIC1.28□□□□□ -2.2
RAE1P78406 SNORD26-201ENST00000384147 75 ntBASIC1.28□□□□□ -2.2
RAE1P78406 SNORD38B-201ENST00000384690 67 ntBASIC1.28□□□□□ -2.2
RAE1P78406 MIR758-201ENST00000390227 88 ntBASIC1.28□□□□□ -2.2
RAE1P78406 RNU6-613P-201ENST00000410412 108 ntBASIC1.28□□□□□ -2.2
RAE1P78406 AL022718.1-201ENST00000412004 84 ntBASIC1.28□□□□□ -2.2
RAE1P78406 RPS29P23-201ENST00000458635 123 ntBASIC1.28□□□□□ -2.2
RAE1P78406 RN7SKP19-201ENST00000516016 252 ntBASIC1.28□□□□□ -2.2
RAE1P78406 MIR4264-201ENST00000583520 66 ntBASIC1.28□□□□□ -2.2
RAE1P78406 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.28□□□□□ -2.2
RAE1P78406 SEPT14P17-201ENST00000617978 177 ntBASIC1.28□□□□□ -2.2
RAE1P78406 SNORD38B-202ENST00000625943 69 ntBASIC1.28□□□□□ -2.2
RAE1P78406 AL161722.3-201ENST00000605789 2983 ntBASIC1.28□□□□□ -2.2
RAE1P78406 AL157777.2-201ENST00000258070 137 ntBASIC1.27□□□□□ -2.21
RAE1P78406 Y_RNA.298-201ENST00000364960 107 ntBASIC1.27□□□□□ -2.21
RAE1P78406 RNU6-910P-201ENST00000390844 107 ntBASIC1.27□□□□□ -2.21
RAE1P78406 SNORA75.2-201ENST00000391138 150 ntBASIC1.27□□□□□ -2.21
RAE1P78406 SNORA75.3-201ENST00000391231 150 ntBASIC1.27□□□□□ -2.21
RAE1P78406 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.27□□□□□ -2.21
RAE1P78406 RNU7-164P-201ENST00000459221 62 ntBASIC1.27□□□□□ -2.21
RAE1P78406 RNU7-123P-201ENST00000515911 60 ntBASIC1.27□□□□□ -2.21
RAE1P78406 RNU2-35P-201ENST00000516446 142 ntBASIC1.27□□□□□ -2.21
RAE1P78406 IGKV1-22-201ENST00000524313 326 ntBASIC1.27□□□□□ -2.21
RAE1P78406 AP000753.3-201ENST00000604083 169 ntBASIC1.27□□□□□ -2.21
RAE1P78406 Y_RNA.71-201ENST00000362892 104 ntBASIC1.26□□□□□ -2.21
RAE1P78406 RNA5SP99-201ENST00000364020 114 ntBASIC1.26□□□□□ -2.21
RAE1P78406 SNORD116-14-201ENST00000383894 92 ntBASIC1.26□□□□□ -2.21
RAE1P78406 SNORD116-17-201ENST00000383929 92 ntBASIC1.26□□□□□ -2.21
RAE1P78406 SNORD116-15-201ENST00000384445 92 ntBASIC1.26□□□□□ -2.21
RAE1P78406 SNORA80D-201ENST00000384488 135 ntBASIC1.26□□□□□ -2.21
RAE1P78406 SNORD116-19-201ENST00000384729 92 ntBASIC1.26□□□□□ -2.21
RAE1P78406 SNORD12-201ENST00000391002 90 ntBASIC1.26□□□□□ -2.21
RAE1P78406 RNU1-123P-201ENST00000458950 160 ntBASIC1.26□□□□□ -2.21
RAE1P78406 RNU6-772P-201ENST00000516042 105 ntBASIC1.26□□□□□ -2.21
RAE1P78406 SNORD79.1-201ENST00000516069 84 ntBASIC1.26□□□□□ -2.21
RAE1P78406 RN7SKP179-201ENST00000516126 217 ntBASIC1.26□□□□□ -2.21
RAE1P78406 RNY4P20-201ENST00000516678 93 ntBASIC1.26□□□□□ -2.21
RAE1P78406 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
RAE1P78406 ZNF209P-201ENST00000593450 2304 ntBASIC1.25□□□□□ -2.21
RAE1P78406 RNA5SP432-201ENST00000362480 116 ntBASIC1.25□□□□□ -2.21
RAE1P78406 SNORD58C-201ENST00000365223 64 ntBASIC1.25□□□□□ -2.21
RAE1P78406 RNA5SP136-201ENST00000410906 107 ntBASIC1.25□□□□□ -2.21
RAE1P78406 AL591704.2-201ENST00000421658 181 ntBASIC1.25□□□□□ -2.21
RAE1P78406 RNU7-21P-201ENST00000459430 62 ntBASIC1.25□□□□□ -2.21
RAE1P78406 AC004223.1-201ENST00000479840 271 ntBASIC1.25□□□□□ -2.21
RAE1P78406 SNORA70.22-201ENST00000517160 124 ntBASIC1.25□□□□□ -2.21
RAE1P78406 Y_RNA.127-201ENST00000363386 109 ntBASIC1.24□□□□□ -2.21
RAE1P78406 RNU6-654P-201ENST00000364373 107 ntBASIC1.24□□□□□ -2.21
RAE1P78406 RNU6-1117P-201ENST00000384525 104 ntBASIC1.24□□□□□ -2.21
RAE1P78406 MIRLET7F2-201ENST00000385277 83 ntBASIC1.24□□□□□ -2.21
RAE1P78406 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.24□□□□□ -2.21
RAE1P78406 RNU4-62P-201ENST00000410125 130 ntBASIC1.24□□□□□ -2.21
RAE1P78406 RNU6-955P-201ENST00000410497 104 ntBASIC1.24□□□□□ -2.21
RAE1P78406 AC008267.6-201ENST00000441664 139 ntBASIC1.24□□□□□ -2.21
RAE1P78406 RNU7-113P-201ENST00000459273 62 ntBASIC1.24□□□□□ -2.21
RAE1P78406 AC113410.1-201ENST00000505029 247 ntBASIC1.24□□□□□ -2.21
RAE1P78406 RNU6-781P-201ENST00000516377 101 ntBASIC1.24□□□□□ -2.21
RAE1P78406 RNU6-1234P-201ENST00000516877 103 ntBASIC1.24□□□□□ -2.21
RAE1P78406 RNU6-1258P-201ENST00000516911 111 ntBASIC1.24□□□□□ -2.21
RAE1P78406 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.24□□□□□ -2.21
RAE1P78406 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.24□□□□□ -2.21
RAE1P78406 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
RAE1P78406 RNA5SP327-201ENST00000362494 101 ntBASIC1.23□□□□□ -2.21
RAE1P78406 SNORD115-2-201ENST00000362842 82 ntBASIC1.23□□□□□ -2.21
RAE1P78406 Y_RNA.168-201ENST00000363740 102 ntBASIC1.23□□□□□ -2.21
RAE1P78406 Y_RNA.171-201ENST00000363760 102 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms