Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 RNU7-80P-201ENST00000459562 61 ntBASIC0.96□□□□□ -2.26
CDH11P55287 RNU6-1149P-201ENST00000516810 97 ntBASIC0.96□□□□□ -2.26
CDH11P55287 AC131055.1-201ENST00000584626 316 ntBASIC0.96□□□□□ -2.26
CDH11P55287 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
CDH11P55287 MTND5P32-201ENST00000560711 1802 ntBASIC0.96□□□□□ -2.26
CDH11P55287 MIR377-201ENST00000362145 69 ntBASIC0.95□□□□□ -2.26
CDH11P55287 Y_RNA.52-201ENST00000362760 96 ntBASIC0.95□□□□□ -2.26
CDH11P55287 SNORD114-22-201ENST00000365423 72 ntBASIC0.95□□□□□ -2.26
CDH11P55287 Y_RNA.508-201ENST00000384502 114 ntBASIC0.95□□□□□ -2.26
CDH11P55287 MIR518E-201ENST00000385252 88 ntBASIC0.95□□□□□ -2.26
CDH11P55287 RNU6-907P-201ENST00000390924 102 ntBASIC0.95□□□□□ -2.26
CDH11P55287 SNORA75.5-201ENST00000391291 81 ntBASIC0.95□□□□□ -2.26
CDH11P55287 RNA5SP95-201ENST00000410319 137 ntBASIC0.95□□□□□ -2.26
CDH11P55287 RNU6-602P-201ENST00000411155 105 ntBASIC0.95□□□□□ -2.26
CDH11P55287 MIR2115-201ENST00000516657 100 ntBASIC0.95□□□□□ -2.26
CDH11P55287 RNU2-60P-201ENST00000517290 128 ntBASIC0.95□□□□□ -2.26
CDH11P55287 DNAJC19P2-201ENST00000593340 302 ntBASIC0.95□□□□□ -2.26
CDH11P55287 HSPE1P19-201ENST00000603327 295 ntBASIC0.95□□□□□ -2.26
CDH11P55287 AL078603.1-201ENST00000603824 313 ntBASIC0.95□□□□□ -2.26
CDH11P55287 AC106800.4-201ENST00000614905 153 ntBASIC0.95□□□□□ -2.26
CDH11P55287 MIR6717-201ENST00000622747 73 ntBASIC0.95□□□□□ -2.26
CDH11P55287 MIR96-201ENST00000362288 78 ntBASIC0.94□□□□□ -2.26
CDH11P55287 Y_RNA.118-201ENST00000363300 101 ntBASIC0.94□□□□□ -2.26
CDH11P55287 Y_RNA.168-201ENST00000363740 102 ntBASIC0.94□□□□□ -2.26
CDH11P55287 Y_RNA.251-201ENST00000364551 99 ntBASIC0.94□□□□□ -2.26
CDH11P55287 Y_RNA.330-201ENST00000365230 109 ntBASIC0.94□□□□□ -2.26
CDH11P55287 Y_RNA.497-201ENST00000384447 98 ntBASIC0.94□□□□□ -2.26
CDH11P55287 Y_RNA.580-201ENST00000391004 95 ntBASIC0.94□□□□□ -2.26
CDH11P55287 RNU7-45P-201ENST00000459460 63 ntBASIC0.94□□□□□ -2.26
CDH11P55287 SNORD124-201ENST00000459577 104 ntBASIC0.94□□□□□ -2.26
CDH11P55287 AC103810.9-201ENST00000606688 112 ntBASIC0.94□□□□□ -2.26
CDH11P55287 AC098479.1-201ENST00000609225 154 ntBASIC0.94□□□□□ -2.26
CDH11P55287 MIR342-201ENST00000362212 99 ntBASIC0.93□□□□□ -2.26
CDH11P55287 Y_RNA.150-201ENST00000363562 102 ntBASIC0.93□□□□□ -2.26
CDH11P55287 SNORD113.3-201ENST00000364630 78 ntBASIC0.93□□□□□ -2.26
CDH11P55287 RNU6-818P-201ENST00000364837 108 ntBASIC0.93□□□□□ -2.26
CDH11P55287 Y_RNA.454-201ENST00000384224 113 ntBASIC0.93□□□□□ -2.26
CDH11P55287 Y_RNA.555-201ENST00000384673 110 ntBASIC0.93□□□□□ -2.26
CDH11P55287 RNU6-1319P-201ENST00000390855 104 ntBASIC0.93□□□□□ -2.26
CDH11P55287 RNU6-747P-201ENST00000390928 104 ntBASIC0.93□□□□□ -2.26
CDH11P55287 RNU6-241P-201ENST00000391148 104 ntBASIC0.93□□□□□ -2.26
CDH11P55287 RNU6-588P-201ENST00000410281 105 ntBASIC0.93□□□□□ -2.26
CDH11P55287 RNU6-177P-201ENST00000411257 104 ntBASIC0.93□□□□□ -2.26
CDH11P55287 RNU7-40P-201ENST00000516397 64 ntBASIC0.93□□□□□ -2.26
CDH11P55287 AC023827.1-201ENST00000569247 97 ntBASIC0.93□□□□□ -2.26
CDH11P55287 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.93□□□□□ -2.26
CDH11P55287 MIR4264-201ENST00000583520 66 ntBASIC0.93□□□□□ -2.26
CDH11P55287 SNORD114-21-201ENST00000606412 72 ntBASIC0.93□□□□□ -2.26
CDH11P55287 MIR6844-201ENST00000637122 62 ntBASIC0.93□□□□□ -2.26
CDH11P55287 AL391516.1-201ENST00000554380 2449 ntBASIC0.92□□□□□ -2.26
CDH11P55287 Y_RNA.430-201ENST00000384081 110 ntBASIC0.92□□□□□ -2.26
CDH11P55287 SNORD111-201ENST00000408139 94 ntBASIC0.92□□□□□ -2.26
CDH11P55287 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.92□□□□□ -2.26
CDH11P55287 MIR6841-201ENST00000637129 72 ntBASIC0.92□□□□□ -2.26
CDH11P55287 RNU6-349P-201ENST00000362402 107 ntBASIC0.91□□□□□ -2.26
CDH11P55287 SNORA1.1-201ENST00000364671 133 ntBASIC0.91□□□□□ -2.26
CDH11P55287 RNU6-1130P-201ENST00000365434 107 ntBASIC0.91□□□□□ -2.26
CDH11P55287 SNORD38B-201ENST00000384690 67 ntBASIC0.91□□□□□ -2.26
CDH11P55287 MIR200A-201ENST00000384875 90 ntBASIC0.91□□□□□ -2.26
CDH11P55287 RNU7-197P-201ENST00000458836 62 ntBASIC0.91□□□□□ -2.26
CDH11P55287 SNORD38B-202ENST00000625943 69 ntBASIC0.91□□□□□ -2.26
CDH11P55287 AL596211.1-201ENST00000569873 2277 ntBASIC0.91□□□□□ -2.26
CDH11P55287 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.9□□□□□ -2.26
CDH11P55287 Y_RNA.180-201ENST00000363867 113 ntBASIC0.9□□□□□ -2.27
CDH11P55287 RNU1-93P-201ENST00000364704 169 ntBASIC0.9□□□□□ -2.27
CDH11P55287 RNU1-133P-201ENST00000364867 167 ntBASIC0.9□□□□□ -2.27
CDH11P55287 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.9□□□□□ -2.27
CDH11P55287 AC104465.1-201ENST00000611365 139 ntBASIC0.9□□□□□ -2.27
CDH11P55287 uc_338.6-201ENST00000613544 171 ntBASIC0.9□□□□□ -2.27
CDH11P55287 MIR6740-201ENST00000618268 113 ntBASIC0.9□□□□□ -2.27
CDH11P55287 AC012676.2-201ENST00000619258 186 ntBASIC0.9□□□□□ -2.27
CDH11P55287 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
CDH11P55287 MIR302B-201ENST00000362188 73 ntBASIC0.89□□□□□ -2.27
CDH11P55287 RNU6-369P-201ENST00000362515 102 ntBASIC0.89□□□□□ -2.27
CDH11P55287 Y_RNA.270-201ENST00000364693 104 ntBASIC0.89□□□□□ -2.27
CDH11P55287 Y_RNA.355-201ENST00000365462 98 ntBASIC0.89□□□□□ -2.27
CDH11P55287 RNU6-804P-201ENST00000384286 107 ntBASIC0.89□□□□□ -2.27
CDH11P55287 SNORA2B-201ENST00000384583 137 ntBASIC0.89□□□□□ -2.27
CDH11P55287 MIR563-201ENST00000385080 79 ntBASIC0.89□□□□□ -2.27
CDH11P55287 RNU6-205P-201ENST00000390858 107 ntBASIC0.89□□□□□ -2.27
CDH11P55287 RPS3AP1-201ENST00000413190 320 ntBASIC0.89□□□□□ -2.27
CDH11P55287 snoU13.18-201ENST00000459483 104 ntBASIC0.89□□□□□ -2.27
CDH11P55287 RNU6-113P-201ENST00000516653 101 ntBASIC0.89□□□□□ -2.27
CDH11P55287 RNU6-1212P-201ENST00000517023 104 ntBASIC0.89□□□□□ -2.27
CDH11P55287 MIR3144-201ENST00000579460 79 ntBASIC0.89□□□□□ -2.27
CDH11P55287 AP000753.3-201ENST00000604083 169 ntBASIC0.89□□□□□ -2.27
CDH11P55287 RNU6-94P-201ENST00000607728 107 ntBASIC0.89□□□□□ -2.27
CDH11P55287 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.89□□□□□ -2.27
CDH11P55287 MIR6734-201ENST00000621166 68 ntBASIC0.89□□□□□ -2.27
CDH11P55287 AC021613.1-201ENST00000623880 111 ntBASIC0.89□□□□□ -2.27
CDH11P55287 RNU6-1187P-201ENST00000364771 110 ntBASIC0.88□□□□□ -2.27
CDH11P55287 SNORD114-24-201ENST00000365029 72 ntBASIC0.88□□□□□ -2.27
CDH11P55287 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.88□□□□□ -2.27
CDH11P55287 snoU13.2-201ENST00000459201 104 ntBASIC0.88□□□□□ -2.27
CDH11P55287 snoU13.21-201ENST00000459368 105 ntBASIC0.88□□□□□ -2.27
CDH11P55287 RPL39P28-201ENST00000465655 155 ntBASIC0.88□□□□□ -2.27
CDH11P55287 RNA5SP220-201ENST00000516298 104 ntBASIC0.88□□□□□ -2.27
CDH11P55287 Y_RNA.778-201ENST00000620203 90 ntBASIC0.88□□□□□ -2.27
CDH11P55287 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.88□□□□□ -2.27
CDH11P55287 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 173.5 ms