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Protein–RNA interactions for Protein: P55283
CDH4, Cadherin-4, human
Predictions only
Length
916 aa
.
Download Table
Protein
RNA
Prediction (catRAPID)
Interaction (ENCODE eCLIP)
Gene
UniProt Accession
Transcript Symbol
Ensembl Transcript ID
Length
Transcript Status
Prediction Score
Prediction z-Score
p-Value
Fold Change
CDH4
P55283
Y_RNA.258-201
ENST00000364613
105 nt
BASIC
0.18
□□□□□ -2.38
CDH4
P55283
RNU6-740P-201
ENST00000364734
105 nt
BASIC
0.18
□□□□□ -2.38
CDH4
P55283
Y_RNA.304-201
ENST00000365011
112 nt
BASIC
0.18
□□□□□ -2.38
CDH4
P55283
SNORA1-201
ENST00000384107
130 nt
BASIC
0.18
□□□□□ -2.38
CDH4
P55283
Y_RNA.535-201
ENST00000384612
99 nt
BASIC
0.18
□□□□□ -2.38
CDH4
P55283
SNORA26-201
ENST00000391286
122 nt
BASIC
0.18
□□□□□ -2.38
CDH4
P55283
SNORD71-201
ENST00000411292
86 nt
BASIC
0.18
□□□□□ -2.38
CDH4
P55283
SNRPGP12-201
ENST00000449481
213 nt
BASIC
0.18
□□□□□ -2.38
CDH4
P55283
SNORA62.5-201
ENST00000516634
120 nt
BASIC
0.18
□□□□□ -2.38
CDH4
P55283
RNU6-448P-201
ENST00000517052
107 nt
BASIC
0.18
□□□□□ -2.38
CDH4
P55283
AC020661.2-201
ENST00000560114
134 nt
BASIC
0.18
□□□□□ -2.38
CDH4
P55283
MIR3678-201
ENST00000578455
94 nt
BASIC
0.18
□□□□□ -2.38
CDH4
P55283
MIR4431-201
ENST00000579990
94 nt
BASIC
0.18
□□□□□ -2.38
CDH4
P55283
MIR3171-201
ENST00000584270
74 nt
BASIC
0.18
□□□□□ -2.38
CDH4
P55283
SNORA25.18-201
ENST00000607153
114 nt
BASIC
0.18
□□□□□ -2.38
CDH4
P55283
MIR8066-201
ENST00000617280
78 nt
BASIC
0.18
□□□□□ -2.38
CDH4
P55283
Y_RNA.23-201
ENST00000362496
106 nt
BASIC
0.17
□□□□□ -2.38
CDH4
P55283
Y_RNA.432-201
ENST00000384087
111 nt
BASIC
0.17
□□□□□ -2.38
CDH4
P55283
RNY3P5-201
ENST00000384127
102 nt
BASIC
0.17
□□□□□ -2.38
CDH4
P55283
RNU6-651P-201
ENST00000411040
105 nt
BASIC
0.17
□□□□□ -2.38
CDH4
P55283
Y_RNA.622-201
ENST00000411091
108 nt
BASIC
0.17
□□□□□ -2.38
CDH4
P55283
AL353742.1-201
ENST00000453455
224 nt
TSL 3
BASIC
0.17
□□□□□ -2.38
CDH4
P55283
AC103879.1-201
ENST00000503093
255 nt
TSL 2
BASIC
0.17
□□□□□ -2.38
CDH4
P55283
RNU6-453P-201
ENST00000516819
85 nt
BASIC
0.17
□□□□□ -2.38
CDH4
P55283
RNA5SP330-201
ENST00000517096
96 nt
BASIC
0.17
□□□□□ -2.38
CDH4
P55283
AC022523.2-201
ENST00000561045
150 nt
BASIC
0.17
□□□□□ -2.38
CDH4
P55283
MIR342-201
ENST00000362212
99 nt
BASIC
0.16
□□□□□ -2.38
CDH4
P55283
Y_RNA.42-201
ENST00000362660
108 nt
BASIC
0.16
□□□□□ -2.38
CDH4
P55283
RNA5SP62-201
ENST00000363457
110 nt
BASIC
0.16
□□□□□ -2.38
CDH4
P55283
RNU5E-4P-201
ENST00000364931
120 nt
BASIC
0.16
□□□□□ -2.38
CDH4
P55283
RNU6-597P-201
ENST00000365620
102 nt
BASIC
0.16
□□□□□ -2.38
CDH4
P55283
SNORA8.2-201
ENST00000384372
139 nt
BASIC
0.16
□□□□□ -2.38
CDH4
P55283
RNU6ATAC4P-201
ENST00000387446
126 nt
BASIC
0.16
□□□□□ -2.38
CDH4
P55283
AL136320.1-201
ENST00000417273
430 nt
TSL 3
BASIC
0.16
□□□□□ -2.38
CDH4
P55283
MTND4LP11-201
ENST00000422184
280 nt
BASIC
0.16
□□□□□ -2.38
CDH4
P55283
SNORD2.1-201
ENST00000458762
69 nt
BASIC
0.16
□□□□□ -2.38
CDH4
P55283
AC137770.1-201
ENST00000504620
530 nt
TSL 3
BASIC
0.16
□□□□□ -2.38
CDH4
P55283
AC023932.2-201
ENST00000603176
175 nt
BASIC
0.16
□□□□□ -2.38
CDH4
P55283
SNORA36.1-201
ENST00000363424
132 nt
BASIC
0.15
□□□□□ -2.39
CDH4
P55283
RNU4-67P-201
ENST00000364569
141 nt
BASIC
0.15
□□□□□ -2.39
CDH4
P55283
RNA5SP117-201
ENST00000365294
118 nt
BASIC
0.15
□□□□□ -2.39
CDH4
P55283
Y_RNA.351-201
ENST00000365436
96 nt
BASIC
0.15
□□□□□ -2.39
CDH4
P55283
RNU6-716P-201
ENST00000365621
103 nt
BASIC
0.15
□□□□□ -2.39
CDH4
P55283
MIR616-201
ENST00000385293
97 nt
BASIC
0.15
□□□□□ -2.39
CDH4
P55283
RNU6-1228P-201
ENST00000391014
107 nt
BASIC
0.15
□□□□□ -2.39
CDH4
P55283
AL606845.1-201
ENST00000404881
255 nt
BASIC
0.15
□□□□□ -2.39
CDH4
P55283
MIR1197-201
ENST00000408818
88 nt
BASIC
0.15
□□□□□ -2.39
CDH4
P55283
AC133485.4-201
ENST00000561835
220 nt
BASIC
0.15
□□□□□ -2.39
CDH4
P55283
AC015818.4-201
ENST00000580931
353 nt
TSL 5
BASIC
0.15
□□□□□ -2.39
CDH4
P55283
TTC28-AS1_2.1-201
ENST00000611117
157 nt
BASIC
0.15
□□□□□ -2.39
CDH4
P55283
Y_RNA.44-201
ENST00000362676
108 nt
BASIC
0.14
□□□□□ -2.39
CDH4
P55283
Y_RNA.61-201
ENST00000362835
102 nt
BASIC
0.14
□□□□□ -2.39
CDH4
P55283
Y_RNA.82-201
ENST00000363000
102 nt
BASIC
0.14
□□□□□ -2.39
CDH4
P55283
Y_RNA.92-201
ENST00000363043
102 nt
BASIC
0.14
□□□□□ -2.39
CDH4
P55283
RNU6-653P-201
ENST00000363074
106 nt
BASIC
0.14
□□□□□ -2.39
CDH4
P55283
Y_RNA.235-201
ENST00000364412
102 nt
BASIC
0.14
□□□□□ -2.39
CDH4
P55283
Y_RNA.306-201
ENST00000365015
102 nt
BASIC
0.14
□□□□□ -2.39
CDH4
P55283
Y_RNA.312-201
ENST00000365089
102 nt
BASIC
0.14
□□□□□ -2.39
CDH4
P55283
Y_RNA.322-201
ENST00000365151
102 nt
BASIC
0.14
□□□□□ -2.39
CDH4
P55283
Y_RNA.430-201
ENST00000384081
110 nt
BASIC
0.14
□□□□□ -2.39
CDH4
P55283
RNU6ATAC42P-201
ENST00000408637
95 nt
BASIC
0.14
□□□□□ -2.39
CDH4
P55283
SNORD93-201
ENST00000408813
74 nt
BASIC
0.14
□□□□□ -2.39
CDH4
P55283
Y_RNA.617-201
ENST00000410920
90 nt
BASIC
0.14
□□□□□ -2.39
CDH4
P55283
Y_RNA.650-201
ENST00000459002
102 nt
BASIC
0.14
□□□□□ -2.39
CDH4
P55283
RNU6-863P-201
ENST00000515989
104 nt
BASIC
0.14
□□□□□ -2.39
CDH4
P55283
Y_RNA.777-201
ENST00000516982
102 nt
BASIC
0.14
□□□□□ -2.39
CDH4
P55283
RNU6-570P-201
ENST00000517051
105 nt
BASIC
0.14
□□□□□ -2.39
CDH4
P55283
Y_RNA.771-201
ENST00000598668
102 nt
BASIC
0.14
□□□□□ -2.39
CDH4
P55283
AL662814.1-201
ENST00000617364
121 nt
BASIC
0.14
□□□□□ -2.39
CDH4
P55283
Y_RNA.789-201
ENST00000622480
102 nt
BASIC
0.14
□□□□□ -2.39
CDH4
P55283
MIR302B-201
ENST00000362188
73 nt
BASIC
0.13
□□□□□ -2.39
CDH4
P55283
RNA5SP325-201
ENST00000363756
130 nt
BASIC
0.13
□□□□□ -2.39
CDH4
P55283
Y_RNA.567-201
ENST00000384736
106 nt
BASIC
0.13
□□□□□ -2.39
CDH4
P55283
U8.15-201
ENST00000390947
134 nt
BASIC
0.13
□□□□□ -2.39
CDH4
P55283
RNA5SP299-201
ENST00000391203
116 nt
BASIC
0.13
□□□□□ -2.39
CDH4
P55283
RNU6-985P-201
ENST00000410182
104 nt
BASIC
0.13
□□□□□ -2.39
CDH4
P55283
RNU4-83P-201
ENST00000410863
133 nt
BASIC
0.13
□□□□□ -2.39
CDH4
P55283
AC096949.1-201
ENST00000412047
152 nt
BASIC
0.13
□□□□□ -2.39
CDH4
P55283
RNU6-561P-201
ENST00000516222
102 nt
BASIC
0.13
□□□□□ -2.39
CDH4
P55283
MIR3129-201
ENST00000581095
76 nt
BASIC
0.13
□□□□□ -2.39
CDH4
P55283
MIR5197-201
ENST00000583721
112 nt
BASIC
0.13
□□□□□ -2.39
CDH4
P55283
uc_338.16-201
ENST00000621804
95 nt
BASIC
0.13
□□□□□ -2.39
CDH4
P55283
Y_RNA.237-201
ENST00000364439
102 nt
BASIC
0.12
□□□□□ -2.39
CDH4
P55283
RNU6-815P-201
ENST00000384080
113 nt
BASIC
0.12
□□□□□ -2.39
CDH4
P55283
Y_RNA.542-201
ENST00000384641
111 nt
BASIC
0.12
□□□□□ -2.39
CDH4
P55283
MIR644A-201
ENST00000385262
94 nt
BASIC
0.12
□□□□□ -2.39
CDH4
P55283
Y_RNA.588-201
ENST00000391254
102 nt
BASIC
0.12
□□□□□ -2.39
CDH4
P55283
AC113618.1-201
ENST00000416747
285 nt
BASIC
0.12
□□□□□ -2.39
CDH4
P55283
AL135790.1-201
ENST00000427161
157 nt
TSL 3
BASIC
0.12
□□□□□ -2.39
CDH4
P55283
AP003327.1-201
ENST00000529684
127 nt
BASIC
0.12
□□□□□ -2.39
CDH4
P55283
AP001094.1-201
ENST00000579805
193 nt
BASIC
0.12
□□□□□ -2.39
CDH4
P55283
MIR4282-201
ENST00000583613
67 nt
BASIC
0.12
□□□□□ -2.39
CDH4
P55283
MIR6718-201
ENST00000616153
80 nt
BASIC
0.12
□□□□□ -2.39
CDH4
P55283
AC091932.4-201
ENST00000623386
200 nt
BASIC
0.12
□□□□□ -2.39
CDH4
P55283
Y_RNA.13-201
ENST00000362403
112 nt
BASIC
0.11
□□□□□ -2.39
CDH4
P55283
Y_RNA.199-201
ENST00000364014
102 nt
BASIC
0.11
□□□□□ -2.39
CDH4
P55283
RNU6-381P-201
ENST00000391259
108 nt
BASIC
0.11
□□□□□ -2.39
CDH4
P55283
MIR1295A-201
ENST00000408463
79 nt
BASIC
0.11
□□□□□ -2.39
CDH4
P55283
RNA5SP261-201
ENST00000410536
106 nt
BASIC
0.11
□□□□□ -2.39
CDH4
P55283
MTCYBP6-201
ENST00000441810
138 nt
BASIC
0.11
□□□□□ -2.39
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