Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 Y_RNA.176-201ENST00000363815 109 ntBASIC0.58□□□□□ -2.32
VCPP55072 SNORA63C-201ENST00000364578 129 ntBASIC0.58□□□□□ -2.32
VCPP55072 Y_RNA.410-201ENST00000383992 113 ntBASIC0.58□□□□□ -2.32
VCPP55072 SNORD38B-201ENST00000384690 67 ntBASIC0.58□□□□□ -2.32
VCPP55072 RNU6-1228P-201ENST00000391014 107 ntBASIC0.58□□□□□ -2.32
VCPP55072 RNU1-119P-201ENST00000391122 165 ntBASIC0.58□□□□□ -2.32
VCPP55072 SNORD83.1-201ENST00000411362 77 ntBASIC0.58□□□□□ -2.32
VCPP55072 AC244098.3-201ENST00000424803 96 ntBASIC0.58□□□□□ -2.32
VCPP55072 AC011195.1-201ENST00000578177 177 ntBASIC0.58□□□□□ -2.32
VCPP55072 SNORD38B-202ENST00000625943 69 ntBASIC0.58□□□□□ -2.32
VCPP55072 Z97988.1-201ENST00000637697 135 ntBASIC0.58□□□□□ -2.32
VCPP55072 Y_RNA.145-201ENST00000363527 102 ntBASIC0.57□□□□□ -2.32
VCPP55072 Y_RNA.170-201ENST00000363746 110 ntBASIC0.57□□□□□ -2.32
VCPP55072 Y_RNA.199-201ENST00000364014 102 ntBASIC0.57□□□□□ -2.32
VCPP55072 RNY4P3-201ENST00000365254 95 ntBASIC0.57□□□□□ -2.32
VCPP55072 RNU6-1189P-201ENST00000383958 107 ntBASIC0.57□□□□□ -2.32
VCPP55072 Y_RNA.416-201ENST00000384014 113 ntBASIC0.57□□□□□ -2.32
VCPP55072 RNU6-472P-201ENST00000384299 107 ntBASIC0.57□□□□□ -2.32
VCPP55072 MIR1912-201ENST00000410389 80 ntBASIC0.57□□□□□ -2.32
VCPP55072 RNU7-62P-201ENST00000458856 62 ntBASIC0.57□□□□□ -2.32
VCPP55072 RNU7-96P-201ENST00000459535 64 ntBASIC0.57□□□□□ -2.32
VCPP55072 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.57□□□□□ -2.32
VCPP55072 AC008737.2-201ENST00000599446 118 ntBASIC0.57□□□□□ -2.32
VCPP55072 AC097639.2-201ENST00000603159 172 ntBASIC0.57□□□□□ -2.32
VCPP55072 AC067863.3-201ENST00000624172 122 ntBASIC0.57□□□□□ -2.32
VCPP55072 Y_RNA.440-201ENST00000384120 114 ntBASIC0.56□□□□□ -2.32
VCPP55072 SNORD77.3-201ENST00000391113 65 ntBASIC0.56□□□□□ -2.32
VCPP55072 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.56□□□□□ -2.32
VCPP55072 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.56□□□□□ -2.32
VCPP55072 AL138752.1-201ENST00000452964 351 ntBASIC0.56□□□□□ -2.32
VCPP55072 AL117187.1-201ENST00000555482 181 ntBASIC0.56□□□□□ -2.32
VCPP55072 RNU6-653P-201ENST00000363074 106 ntBASIC0.55□□□□□ -2.32
VCPP55072 SNORA1.1-201ENST00000364671 133 ntBASIC0.55□□□□□ -2.32
VCPP55072 RNA5SP331-201ENST00000364986 107 ntBASIC0.55□□□□□ -2.32
VCPP55072 Y_RNA.352-201ENST00000365439 102 ntBASIC0.55□□□□□ -2.32
VCPP55072 RNU6-381P-201ENST00000391259 108 ntBASIC0.55□□□□□ -2.32
VCPP55072 RNU2-11P-201ENST00000459191 187 ntBASIC0.55□□□□□ -2.32
VCPP55072 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.55□□□□□ -2.32
VCPP55072 RNU6-998P-201ENST00000515894 101 ntBASIC0.55□□□□□ -2.32
VCPP55072 RNU6-977P-201ENST00000516411 103 ntBASIC0.55□□□□□ -2.32
VCPP55072 MIR4643-201ENST00000577473 78 ntBASIC0.55□□□□□ -2.32
VCPP55072 MIR4771-2-201ENST00000577758 74 ntBASIC0.55□□□□□ -2.32
VCPP55072 MIR5589-201ENST00000579442 60 ntBASIC0.55□□□□□ -2.32
VCPP55072 MIR4771-1-201ENST00000582617 74 ntBASIC0.55□□□□□ -2.32
VCPP55072 Y_RNA.7-201ENST00000362352 102 ntBASIC0.54□□□□□ -2.32
VCPP55072 RNU4-17P-201ENST00000365598 141 ntBASIC0.54□□□□□ -2.32
VCPP55072 Y_RNA.396-201ENST00000383949 103 ntBASIC0.54□□□□□ -2.32
VCPP55072 SNORA1-201ENST00000384107 130 ntBASIC0.54□□□□□ -2.32
VCPP55072 RNU6-30P-201ENST00000384561 107 ntBASIC0.54□□□□□ -2.32
VCPP55072 MIR520F-201ENST00000384824 87 ntBASIC0.54□□□□□ -2.32
VCPP55072 RNU6-602P-201ENST00000411155 105 ntBASIC0.54□□□□□ -2.32
VCPP55072 AC015818.7-201ENST00000428754 109 ntBASIC0.54□□□□□ -2.32
VCPP55072 AC087499.7-201ENST00000441958 109 ntBASIC0.54□□□□□ -2.32
VCPP55072 AL157398.1-201ENST00000452981 186 ntBASIC0.54□□□□□ -2.32
VCPP55072 MIR6740-201ENST00000618268 113 ntBASIC0.54□□□□□ -2.32
VCPP55072 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
VCPP55072 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.53□□□□□ -2.32
VCPP55072 Y_RNA.23-201ENST00000362496 106 ntBASIC0.53□□□□□ -2.32
VCPP55072 Y_RNA.47-201ENST00000362697 108 ntBASIC0.53□□□□□ -2.32
VCPP55072 Y_RNA.54-201ENST00000362766 105 ntBASIC0.53□□□□□ -2.32
VCPP55072 RNU6-1309P-201ENST00000363305 108 ntBASIC0.53□□□□□ -2.32
VCPP55072 Y_RNA.262-201ENST00000364641 102 ntBASIC0.53□□□□□ -2.32
VCPP55072 Y_RNA.277-201ENST00000364754 102 ntBASIC0.53□□□□□ -2.32
VCPP55072 RNU6-738P-201ENST00000384531 106 ntBASIC0.53□□□□□ -2.32
VCPP55072 RNU6-1011P-201ENST00000384668 107 ntBASIC0.53□□□□□ -2.32
VCPP55072 MIR588-201ENST00000384900 83 ntBASIC0.53□□□□□ -2.32
VCPP55072 MIR548I3-201ENST00000408378 149 ntBASIC0.53□□□□□ -2.32
VCPP55072 RNA5SP222-201ENST00000411039 105 ntBASIC0.53□□□□□ -2.32
VCPP55072 RNU6-561P-201ENST00000516222 102 ntBASIC0.53□□□□□ -2.32
VCPP55072 AC023932.2-201ENST00000603176 175 ntBASIC0.53□□□□□ -2.32
VCPP55072 uc_338.6-201ENST00000613544 171 ntBASIC0.53□□□□□ -2.32
VCPP55072 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.53□□□□□ -2.32
VCPP55072 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
VCPP55072 MIR342-201ENST00000362212 99 ntBASIC0.52□□□□□ -2.33
VCPP55072 Y_RNA.76-201ENST00000362931 109 ntBASIC0.52□□□□□ -2.33
VCPP55072 RNU6-728P-201ENST00000365375 104 ntBASIC0.52□□□□□ -2.33
VCPP55072 Y_RNA.459-201ENST00000384251 102 ntBASIC0.52□□□□□ -2.33
VCPP55072 MIR520H-201ENST00000385126 88 ntBASIC0.52□□□□□ -2.33
VCPP55072 RNU6-1190P-201ENST00000410811 104 ntBASIC0.52□□□□□ -2.33
VCPP55072 AC114737.2-201ENST00000421583 173 ntBASIC0.52□□□□□ -2.33
VCPP55072 MIR18B-201ENST00000454574 71 ntBASIC0.52□□□□□ -2.33
VCPP55072 MIR4804-201ENST00000581683 73 ntBASIC0.52□□□□□ -2.33
VCPP55072 MIR4676-201ENST00000583078 72 ntBASIC0.52□□□□□ -2.33
VCPP55072 AC020891.4-201ENST00000605745 93 ntBASIC0.52□□□□□ -2.33
VCPP55072 AL442067.1-201ENST00000613261 223 ntBASIC0.52□□□□□ -2.33
VCPP55072 AC010332.2-201ENST00000613083 1904 ntBASIC0.52□□□□□ -2.33
VCPP55072 Y_RNA.149-201ENST00000363558 117 ntBASIC0.51□□□□□ -2.33
VCPP55072 RNU6-103P-201ENST00000363686 107 ntBASIC0.51□□□□□ -2.33
VCPP55072 Y_RNA.292-201ENST00000364904 97 ntBASIC0.51□□□□□ -2.33
VCPP55072 Y_RNA.351-201ENST00000365436 96 ntBASIC0.51□□□□□ -2.33
VCPP55072 RNU6-945P-201ENST00000383947 107 ntBASIC0.51□□□□□ -2.33
VCPP55072 Y_RNA.542-201ENST00000384641 111 ntBASIC0.51□□□□□ -2.33
VCPP55072 MIR573-201ENST00000384964 99 ntBASIC0.51□□□□□ -2.33
VCPP55072 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
VCPP55072 SNORA79-201ENST00000408376 140 ntBASIC0.51□□□□□ -2.33
VCPP55072 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.51□□□□□ -2.33
VCPP55072 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.51□□□□□ -2.33
VCPP55072 snoU13.2-201ENST00000459201 104 ntBASIC0.51□□□□□ -2.33
VCPP55072 AP003327.1-201ENST00000529684 127 ntBASIC0.51□□□□□ -2.33
VCPP55072 AC018659.1-201ENST00000551083 169 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms