Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 RNU6-886P-201ENST00000384319 105 ntBASIC1.13□□□□□ -2.23
NR1H2P55055 SNORD37.2-201ENST00000391075 66 ntBASIC1.13□□□□□ -2.23
NR1H2P55055 SNORA75.5-201ENST00000391291 81 ntBASIC1.13□□□□□ -2.23
NR1H2P55055 MIR548I3-201ENST00000408378 149 ntBASIC1.13□□□□□ -2.23
NR1H2P55055 RNU6-588P-201ENST00000410281 105 ntBASIC1.13□□□□□ -2.23
NR1H2P55055 AC090844.1-201ENST00000422019 156 ntBASIC1.13□□□□□ -2.23
NR1H2P55055 FABP5P4-201ENST00000437203 171 ntBASIC1.13□□□□□ -2.23
NR1H2P55055 SCARNA15-202ENST00000516881 127 ntBASIC1.13□□□□□ -2.23
NR1H2P55055 RNU7-70P-201ENST00000516941 66 ntBASIC1.13□□□□□ -2.23
NR1H2P55055 DNAJC19P2-201ENST00000593340 302 ntBASIC1.13□□□□□ -2.23
NR1H2P55055 AC098479.1-201ENST00000609225 154 ntBASIC1.13□□□□□ -2.23
NR1H2P55055 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.13□□□□□ -2.23
NR1H2P55055 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
NR1H2P55055 AL596211.1-201ENST00000569873 2277 ntBASIC1.13□□□□□ -2.23
NR1H2P55055 RNU6-654P-201ENST00000364373 107 ntBASIC1.12□□□□□ -2.23
NR1H2P55055 RNU6-818P-201ENST00000364837 108 ntBASIC1.12□□□□□ -2.23
NR1H2P55055 Y_RNA.454-201ENST00000384224 113 ntBASIC1.12□□□□□ -2.23
NR1H2P55055 PCNPP3-201ENST00000393579 471 ntBASIC1.12□□□□□ -2.23
NR1H2P55055 HMGN1P33-201ENST00000432945 451 ntBASIC1.12□□□□□ -2.23
NR1H2P55055 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.12□□□□□ -2.23
NR1H2P55055 RPS29P1-201ENST00000465274 159 ntBASIC1.12□□□□□ -2.23
NR1H2P55055 AC004223.1-201ENST00000479840 271 ntBASIC1.12□□□□□ -2.23
NR1H2P55055 MIR2115-201ENST00000516657 100 ntBASIC1.12□□□□□ -2.23
NR1H2P55055 MIR3646-201ENST00000578301 84 ntBASIC1.12□□□□□ -2.23
NR1H2P55055 AL020996.3-201ENST00000606617 222 ntBASIC1.12□□□□□ -2.23
NR1H2P55055 MIR8055-201ENST00000610739 97 ntBASIC1.12□□□□□ -2.23
NR1H2P55055 AC091932.4-201ENST00000623386 200 ntBASIC1.12□□□□□ -2.23
NR1H2P55055 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.12□□□□□ -2.23
NR1H2P55055 MTND5P32-201ENST00000560711 1802 ntBASIC1.12□□□□□ -2.23
NR1H2P55055 MIR520E-201ENST00000384867 87 ntBASIC1.11□□□□□ -2.23
NR1H2P55055 RNU6-907P-201ENST00000390924 102 ntBASIC1.11□□□□□ -2.23
NR1H2P55055 RNU6-1190P-201ENST00000410811 104 ntBASIC1.11□□□□□ -2.23
NR1H2P55055 RNU7-45P-201ENST00000459460 63 ntBASIC1.11□□□□□ -2.23
NR1H2P55055 OR2A41P-201ENST00000473586 105 ntBASIC1.11□□□□□ -2.23
NR1H2P55055 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.11□□□□□ -2.23
NR1H2P55055 Y_RNA.52-201ENST00000362760 96 ntBASIC1.1□□□□□ -2.23
NR1H2P55055 RNU1-133P-201ENST00000364867 167 ntBASIC1.1□□□□□ -2.23
NR1H2P55055 RNU6-125P-201ENST00000384505 107 ntBASIC1.1□□□□□ -2.23
NR1H2P55055 RNA5SP95-201ENST00000410319 137 ntBASIC1.1□□□□□ -2.23
NR1H2P55055 RNU6-394P-201ENST00000410735 107 ntBASIC1.1□□□□□ -2.23
NR1H2P55055 AC023827.1-201ENST00000569247 97 ntBASIC1.1□□□□□ -2.23
NR1H2P55055 AC131055.1-201ENST00000584626 316 ntBASIC1.1□□□□□ -2.23
NR1H2P55055 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.1□□□□□ -2.23
NR1H2P55055 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
NR1H2P55055 Y_RNA.8-201ENST00000362353 102 ntBASIC1.09□□□□□ -2.23
NR1H2P55055 SNORA1.1-201ENST00000364671 133 ntBASIC1.09□□□□□ -2.23
NR1H2P55055 RNU6-1130P-201ENST00000365434 107 ntBASIC1.09□□□□□ -2.23
NR1H2P55055 SNORA22-201ENST00000383907 134 ntBASIC1.09□□□□□ -2.23
NR1H2P55055 RNU6-804P-201ENST00000384286 107 ntBASIC1.09□□□□□ -2.23
NR1H2P55055 SNORA22C-201ENST00000384614 134 ntBASIC1.09□□□□□ -2.23
NR1H2P55055 RNU6-613P-201ENST00000410412 108 ntBASIC1.09□□□□□ -2.23
NR1H2P55055 MIR6515-201ENST00000619843 57 ntBASIC1.09□□□□□ -2.23
NR1H2P55055 Z97988.1-201ENST00000637697 135 ntBASIC1.09□□□□□ -2.23
NR1H2P55055 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.08□□□□□ -2.24
NR1H2P55055 RNU6-151P-201ENST00000364158 107 ntBASIC1.08□□□□□ -2.24
NR1H2P55055 RNU6-449P-201ENST00000383914 107 ntBASIC1.08□□□□□ -2.24
NR1H2P55055 SNORD116-18-201ENST00000383961 92 ntBASIC1.08□□□□□ -2.24
NR1H2P55055 Y_RNA.497-201ENST00000384447 98 ntBASIC1.08□□□□□ -2.24
NR1H2P55055 Y_RNA.555-201ENST00000384673 110 ntBASIC1.08□□□□□ -2.24
NR1H2P55055 SNORD38B-201ENST00000384690 67 ntBASIC1.08□□□□□ -2.24
NR1H2P55055 MIR942-201ENST00000401111 86 ntBASIC1.08□□□□□ -2.24
NR1H2P55055 SNORD111-201ENST00000408139 94 ntBASIC1.08□□□□□ -2.24
NR1H2P55055 POLR2J4-204ENST00000418424 324 ntBASIC1.08□□□□□ -2.24
NR1H2P55055 RNA5SP480-201ENST00000516840 109 ntBASIC1.08□□□□□ -2.24
NR1H2P55055 AP000753.3-201ENST00000604083 169 ntBASIC1.08□□□□□ -2.24
NR1H2P55055 AC103810.9-201ENST00000606688 112 ntBASIC1.08□□□□□ -2.24
NR1H2P55055 SNORD38B-202ENST00000625943 69 ntBASIC1.08□□□□□ -2.24
NR1H2P55055 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
NR1H2P55055 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
NR1H2P55055 RNY1P11-201ENST00000363759 113 ntBASIC1.07□□□□□ -2.24
NR1H2P55055 RNU4-11P-201ENST00000365287 132 ntBASIC1.07□□□□□ -2.24
NR1H2P55055 SNORA2B-201ENST00000384583 137 ntBASIC1.07□□□□□ -2.24
NR1H2P55055 RNU6-205P-201ENST00000390858 107 ntBASIC1.07□□□□□ -2.24
NR1H2P55055 AC244023.1-201ENST00000426884 112 ntBASIC1.07□□□□□ -2.24
NR1H2P55055 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.07□□□□□ -2.24
NR1H2P55055 AC036111.3-201ENST00000526389 112 ntBASIC1.07□□□□□ -2.24
NR1H2P55055 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.07□□□□□ -2.24
NR1H2P55055 MIR3144-201ENST00000579460 79 ntBASIC1.07□□□□□ -2.24
NR1H2P55055 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.07□□□□□ -2.24
NR1H2P55055 AC242498.1-201ENST00000604134 111 ntBASIC1.07□□□□□ -2.24
NR1H2P55055 MIR6717-201ENST00000622747 73 ntBASIC1.07□□□□□ -2.24
NR1H2P55055 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
NR1H2P55055 SNORD113.3-201ENST00000364630 78 ntBASIC1.06□□□□□ -2.24
NR1H2P55055 Y_RNA.580-201ENST00000391004 95 ntBASIC1.06□□□□□ -2.24
NR1H2P55055 SNORA26.6-201ENST00000391256 115 ntBASIC1.06□□□□□ -2.24
NR1H2P55055 RNU6-602P-201ENST00000411155 105 ntBASIC1.06□□□□□ -2.24
NR1H2P55055 AC067940.1-201ENST00000458411 300 ntBASIC1.06□□□□□ -2.24
NR1H2P55055 SNORD124-201ENST00000459577 104 ntBASIC1.06□□□□□ -2.24
NR1H2P55055 PDCD5P2-201ENST00000507570 312 ntBASIC1.06□□□□□ -2.24
NR1H2P55055 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.06□□□□□ -2.24
NR1H2P55055 AC112693.2-201ENST00000556538 232 ntBASIC1.06□□□□□ -2.24
NR1H2P55055 AL136317.1-201ENST00000612653 226 ntBASIC1.06□□□□□ -2.24
NR1H2P55055 Y_RNA.778-201ENST00000620203 90 ntBASIC1.06□□□□□ -2.24
NR1H2P55055 RNU1-93P-201ENST00000364704 169 ntBASIC1.05□□□□□ -2.24
NR1H2P55055 MIR613-201ENST00000385248 95 ntBASIC1.05□□□□□ -2.24
NR1H2P55055 MT-TN-201ENST00000387400 73 ntBASIC1.05□□□□□ -2.24
NR1H2P55055 RNU6-1319P-201ENST00000390855 104 ntBASIC1.05□□□□□ -2.24
NR1H2P55055 RNU6-747P-201ENST00000390928 104 ntBASIC1.05□□□□□ -2.24
NR1H2P55055 Y_RNA.584-201ENST00000391090 114 ntBASIC1.05□□□□□ -2.24
NR1H2P55055 RNU6-241P-201ENST00000391148 104 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 203.7 ms