Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 RNU6-580P-201ENST00000365159 107 ntBASIC0.75□□□□□ -2.29
HMGCS2P54868 Y_RNA.412-201ENST00000384001 104 ntBASIC0.75□□□□□ -2.29
HMGCS2P54868 Y_RNA.542-201ENST00000384641 111 ntBASIC0.75□□□□□ -2.29
HMGCS2P54868 AL035398.1-201ENST00000430869 322 ntBASIC0.75□□□□□ -2.29
HMGCS2P54868 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.75□□□□□ -2.29
HMGCS2P54868 Y_RNA.797-201ENST00000515977 94 ntBASIC0.75□□□□□ -2.29
HMGCS2P54868 AC130289.1-201ENST00000577321 73 ntBASIC0.75□□□□□ -2.29
HMGCS2P54868 RNU6-94P-201ENST00000607728 107 ntBASIC0.75□□□□□ -2.29
HMGCS2P54868 U6.106-201ENST00000636360 105 ntBASIC0.75□□□□□ -2.29
HMGCS2P54868 Y_RNA.83-201ENST00000363005 113 ntBASIC0.74□□□□□ -2.29
HMGCS2P54868 SNORD114-23-201ENST00000363536 72 ntBASIC0.74□□□□□ -2.29
HMGCS2P54868 Y_RNA.168-201ENST00000363740 102 ntBASIC0.74□□□□□ -2.29
HMGCS2P54868 Y_RNA.274-201ENST00000364714 101 ntBASIC0.74□□□□□ -2.29
HMGCS2P54868 RNU6-1292P-201ENST00000383856 107 ntBASIC0.74□□□□□ -2.29
HMGCS2P54868 Y_RNA.435-201ENST00000384095 112 ntBASIC0.74□□□□□ -2.29
HMGCS2P54868 RNU4-70P-201ENST00000384579 139 ntBASIC0.74□□□□□ -2.29
HMGCS2P54868 MT-TN-201ENST00000387400 73 ntBASIC0.74□□□□□ -2.29
HMGCS2P54868 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
HMGCS2P54868 SNORD111-201ENST00000408139 94 ntBASIC0.74□□□□□ -2.29
HMGCS2P54868 SNORA79-201ENST00000408376 140 ntBASIC0.74□□□□□ -2.29
HMGCS2P54868 RNU6-1190P-201ENST00000410811 104 ntBASIC0.74□□□□□ -2.29
HMGCS2P54868 HMGN1P33-201ENST00000432945 451 ntBASIC0.74□□□□□ -2.29
HMGCS2P54868 AL138752.1-201ENST00000452964 351 ntBASIC0.74□□□□□ -2.29
HMGCS2P54868 RNU7-96P-201ENST00000459535 64 ntBASIC0.74□□□□□ -2.29
HMGCS2P54868 PSMC1P5-201ENST00000512850 177 ntBASIC0.74□□□□□ -2.29
HMGCS2P54868 MIR4711-201ENST00000578274 70 ntBASIC0.74□□□□□ -2.29
HMGCS2P54868 MIR378D2-201ENST00000580636 98 ntBASIC0.74□□□□□ -2.29
HMGCS2P54868 MIR4653-201ENST00000585107 83 ntBASIC0.74□□□□□ -2.29
HMGCS2P54868 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.74□□□□□ -2.29
HMGCS2P54868 Z97988.1-201ENST00000637697 135 ntBASIC0.74□□□□□ -2.29
HMGCS2P54868 Y_RNA.75-201ENST00000362927 97 ntBASIC0.73□□□□□ -2.29
HMGCS2P54868 Y_RNA.188-201ENST00000363952 111 ntBASIC0.73□□□□□ -2.29
HMGCS2P54868 RNA5SP499-201ENST00000363982 119 ntBASIC0.73□□□□□ -2.29
HMGCS2P54868 RNU6-275P-201ENST00000364910 107 ntBASIC0.73□□□□□ -2.29
HMGCS2P54868 RNU6-1335P-201ENST00000365426 107 ntBASIC0.73□□□□□ -2.29
HMGCS2P54868 MT-TG-201ENST00000387429 68 ntBASIC0.73□□□□□ -2.29
HMGCS2P54868 MIR942-201ENST00000401111 86 ntBASIC0.73□□□□□ -2.29
HMGCS2P54868 AC098934.3-201ENST00000430450 190 ntBASIC0.73□□□□□ -2.29
HMGCS2P54868 RNA5SP255-201ENST00000516370 107 ntBASIC0.73□□□□□ -2.29
HMGCS2P54868 MIR1273G-201ENST00000577677 100 ntBASIC0.73□□□□□ -2.29
HMGCS2P54868 MIR5197-201ENST00000583721 112 ntBASIC0.73□□□□□ -2.29
HMGCS2P54868 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.72□□□□□ -2.29
HMGCS2P54868 MIR377-201ENST00000362145 69 ntBASIC0.72□□□□□ -2.29
HMGCS2P54868 RNU6-369P-201ENST00000362515 102 ntBASIC0.72□□□□□ -2.29
HMGCS2P54868 RNU6-643P-201ENST00000384018 107 ntBASIC0.72□□□□□ -2.29
HMGCS2P54868 Y_RNA.489-201ENST00000384410 101 ntBASIC0.72□□□□□ -2.29
HMGCS2P54868 SNORA2B-201ENST00000384583 137 ntBASIC0.72□□□□□ -2.29
HMGCS2P54868 MIR100-201ENST00000385259 80 ntBASIC0.72□□□□□ -2.29
HMGCS2P54868 RNU6-205P-201ENST00000390858 107 ntBASIC0.72□□□□□ -2.29
HMGCS2P54868 SNORA26.6-201ENST00000391256 115 ntBASIC0.72□□□□□ -2.29
HMGCS2P54868 Y_RNA.618-201ENST00000410949 107 ntBASIC0.72□□□□□ -2.29
HMGCS2P54868 AC006461.1-201ENST00000412637 326 ntBASIC0.72□□□□□ -2.29
HMGCS2P54868 RNU2-11P-201ENST00000459191 187 ntBASIC0.72□□□□□ -2.29
HMGCS2P54868 snoU13.21-201ENST00000459368 105 ntBASIC0.72□□□□□ -2.29
HMGCS2P54868 SNORD116-25-201ENST00000516517 92 ntBASIC0.72□□□□□ -2.29
HMGCS2P54868 RNU7-53P-201ENST00000516705 60 ntBASIC0.72□□□□□ -2.29
HMGCS2P54868 RNU6-1271P-201ENST00000517049 105 ntBASIC0.72□□□□□ -2.29
HMGCS2P54868 AC022559.1-201ENST00000520905 205 ntBASIC0.72□□□□□ -2.29
HMGCS2P54868 MRPS18CP4-201ENST00000535821 231 ntBASIC0.72□□□□□ -2.29
HMGCS2P54868 AC078938.1-201ENST00000620993 318 ntBASIC0.72□□□□□ -2.29
HMGCS2P54868 Y_RNA.351-201ENST00000365436 96 ntBASIC0.71□□□□□ -2.3
HMGCS2P54868 Y_RNA.401-201ENST00000383965 117 ntBASIC0.71□□□□□ -2.3
HMGCS2P54868 MIR608-201ENST00000384820 100 ntBASIC0.71□□□□□ -2.3
HMGCS2P54868 MIR146A-201ENST00000385201 99 ntBASIC0.71□□□□□ -2.3
HMGCS2P54868 RNU6-602P-201ENST00000411155 105 ntBASIC0.71□□□□□ -2.3
HMGCS2P54868 RPS3AP1-201ENST00000413190 320 ntBASIC0.71□□□□□ -2.3
HMGCS2P54868 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.71□□□□□ -2.3
HMGCS2P54868 RNU7-45P-201ENST00000459460 63 ntBASIC0.71□□□□□ -2.3
HMGCS2P54868 SCARNA15-202ENST00000516881 127 ntBASIC0.71□□□□□ -2.3
HMGCS2P54868 MIR4264-201ENST00000583520 66 ntBASIC0.71□□□□□ -2.3
HMGCS2P54868 Z83818.1-201ENST00000603584 150 ntBASIC0.71□□□□□ -2.3
HMGCS2P54868 uc_338.6-201ENST00000613544 171 ntBASIC0.71□□□□□ -2.3
HMGCS2P54868 AC141273.2-201ENST00000618989 130 ntBASIC0.71□□□□□ -2.3
HMGCS2P54868 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
HMGCS2P54868 MIR548I3-201ENST00000408378 149 ntBASIC0.7□□□□□ -2.3
HMGCS2P54868 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.7□□□□□ -2.3
HMGCS2P54868 MTND5P15-201ENST00000434246 349 ntBASIC0.7□□□□□ -2.3
HMGCS2P54868 FABP5P4-201ENST00000437203 171 ntBASIC0.7□□□□□ -2.3
HMGCS2P54868 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.7□□□□□ -2.3
HMGCS2P54868 RNU6-1219P-201ENST00000516143 112 ntBASIC0.7□□□□□ -2.3
HMGCS2P54868 RNU6-388P-201ENST00000517012 105 ntBASIC0.7□□□□□ -2.3
HMGCS2P54868 RNU6-389P-201ENST00000517048 105 ntBASIC0.7□□□□□ -2.3
HMGCS2P54868 AC243829.3-201ENST00000622177 108 ntBASIC0.7□□□□□ -2.3
HMGCS2P54868 MIR342-201ENST00000362212 99 ntBASIC0.69□□□□□ -2.3
HMGCS2P54868 RNU6-1020P-201ENST00000363684 107 ntBASIC0.69□□□□□ -2.3
HMGCS2P54868 RNU6-1336P-201ENST00000383886 109 ntBASIC0.69□□□□□ -2.3
HMGCS2P54868 MIR624-201ENST00000385217 97 ntBASIC0.69□□□□□ -2.3
HMGCS2P54868 AC092628.1-201ENST00000436250 252 ntBASIC0.69□□□□□ -2.3
HMGCS2P54868 U7.7-201ENST00000459276 60 ntBASIC0.69□□□□□ -2.3
HMGCS2P54868 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.69□□□□□ -2.3
HMGCS2P54868 MIR4431-201ENST00000579990 94 ntBASIC0.69□□□□□ -2.3
HMGCS2P54868 AP000753.3-201ENST00000604083 169 ntBASIC0.69□□□□□ -2.3
HMGCS2P54868 MIR6740-201ENST00000618268 113 ntBASIC0.69□□□□□ -2.3
HMGCS2P54868 AC091932.4-201ENST00000623386 200 ntBASIC0.69□□□□□ -2.3
HMGCS2P54868 AC010487.4-201ENST00000637027 61 ntBASIC0.69□□□□□ -2.3
HMGCS2P54868 HSBP1P2-201ENST00000299671 229 ntBASIC0.68□□□□□ -2.3
HMGCS2P54868 Y_RNA.233-201ENST00000364407 101 ntBASIC0.68□□□□□ -2.3
HMGCS2P54868 SNORA1.1-201ENST00000364671 133 ntBASIC0.68□□□□□ -2.3
HMGCS2P54868 Y_RNA.297-201ENST00000364950 91 ntBASIC0.68□□□□□ -2.3
HMGCS2P54868 SNORD38B-201ENST00000384690 67 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms