Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 RNY1P6-201ENST00000384193 109 ntBASIC1.5□□□□□ -2.17
COPB1P53618 SNORA51.10-201ENST00000384418 136 ntBASIC1.5□□□□□ -2.17
COPB1P53618 RNU6-1067P-201ENST00000384752 107 ntBASIC1.5□□□□□ -2.17
COPB1P53618 MIR518E-201ENST00000385252 88 ntBASIC1.5□□□□□ -2.17
COPB1P53618 RNU6-1168P-201ENST00000390831 104 ntBASIC1.5□□□□□ -2.17
COPB1P53618 snoU13.25-201ENST00000458945 104 ntBASIC1.5□□□□□ -2.17
COPB1P53618 RNU1-98P-201ENST00000458992 160 ntBASIC1.5□□□□□ -2.17
COPB1P53618 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.5□□□□□ -2.17
COPB1P53618 RNU6-479P-201ENST00000516348 105 ntBASIC1.5□□□□□ -2.17
COPB1P53618 RNU7-53P-201ENST00000516705 60 ntBASIC1.5□□□□□ -2.17
COPB1P53618 AC068338.1-201ENST00000565567 176 ntBASIC1.5□□□□□ -2.17
COPB1P53618 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.5□□□□□ -2.17
COPB1P53618 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.5□□□□□ -2.17
COPB1P53618 Y_RNA.261-201ENST00000364631 102 ntBASIC1.49□□□□□ -2.17
COPB1P53618 Y_RNA.366-201ENST00000365540 102 ntBASIC1.49□□□□□ -2.17
COPB1P53618 MIR758-201ENST00000390227 88 ntBASIC1.49□□□□□ -2.17
COPB1P53618 SNORA26.6-201ENST00000391256 115 ntBASIC1.49□□□□□ -2.17
COPB1P53618 RN7SKP19-201ENST00000516016 252 ntBASIC1.49□□□□□ -2.17
COPB1P53618 RNU6-240P-201ENST00000516098 97 ntBASIC1.49□□□□□ -2.17
COPB1P53618 SNORD111.1-201ENST00000516421 86 ntBASIC1.49□□□□□ -2.17
COPB1P53618 RNU6-62P-201ENST00000516526 102 ntBASIC1.49□□□□□ -2.17
COPB1P53618 Y_RNA.712-201ENST00000517011 92 ntBASIC1.49□□□□□ -2.17
COPB1P53618 AC019176.1-201ENST00000518519 225 ntBASIC1.49□□□□□ -2.17
COPB1P53618 MIR3664-201ENST00000579074 99 ntBASIC1.49□□□□□ -2.17
COPB1P53618 AL357312.1-201ENST00000603879 298 ntBASIC1.49□□□□□ -2.17
COPB1P53618 AL020996.3-201ENST00000606617 222 ntBASIC1.49□□□□□ -2.17
COPB1P53618 MIR8055-201ENST00000610739 97 ntBASIC1.49□□□□□ -2.17
COPB1P53618 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.49□□□□□ -2.17
COPB1P53618 AL157834.3-201ENST00000615543 103 ntBASIC1.49□□□□□ -2.17
COPB1P53618 ZNF209P-201ENST00000593450 2304 ntBASIC1.49□□□□□ -2.17
COPB1P53618 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
COPB1P53618 SNORA7.1-201ENST00000363750 139 ntBASIC1.48□□□□□ -2.17
COPB1P53618 Y_RNA.224-201ENST00000364308 111 ntBASIC1.48□□□□□ -2.17
COPB1P53618 Y_RNA.525-201ENST00000384570 113 ntBASIC1.48□□□□□ -2.17
COPB1P53618 MIRLET7F2-201ENST00000385277 83 ntBASIC1.48□□□□□ -2.17
COPB1P53618 AC008267.6-201ENST00000441664 139 ntBASIC1.48□□□□□ -2.17
COPB1P53618 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.48□□□□□ -2.17
COPB1P53618 AC245517.4-201ENST00000448601 281 ntBASIC1.48□□□□□ -2.17
COPB1P53618 RPS29P23-201ENST00000458635 123 ntBASIC1.48□□□□□ -2.17
COPB1P53618 snoU13.16-201ENST00000459350 104 ntBASIC1.48□□□□□ -2.17
COPB1P53618 RNU7-45P-201ENST00000459460 63 ntBASIC1.48□□□□□ -2.17
COPB1P53618 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.48□□□□□ -2.17
COPB1P53618 RNU6-1333P-201ENST00000516162 93 ntBASIC1.48□□□□□ -2.17
COPB1P53618 MIR4251-201ENST00000635819 61 ntBASIC1.48□□□□□ -2.17
COPB1P53618 MIR302B-201ENST00000362188 73 ntBASIC1.47□□□□□ -2.17
COPB1P53618 RNU6-690P-201ENST00000365242 106 ntBASIC1.47□□□□□ -2.17
COPB1P53618 SNORA22C-201ENST00000384614 134 ntBASIC1.47□□□□□ -2.17
COPB1P53618 RNU6-1319P-201ENST00000390855 104 ntBASIC1.47□□□□□ -2.17
COPB1P53618 RNU6-747P-201ENST00000390928 104 ntBASIC1.47□□□□□ -2.17
COPB1P53618 RNU6-241P-201ENST00000391148 104 ntBASIC1.47□□□□□ -2.17
COPB1P53618 RNU6-1190P-201ENST00000410811 104 ntBASIC1.47□□□□□ -2.17
COPB1P53618 RNU6-177P-201ENST00000411257 104 ntBASIC1.47□□□□□ -2.17
COPB1P53618 RPS27P16-201ENST00000425758 201 ntBASIC1.47□□□□□ -2.17
COPB1P53618 RNA5SP445-201ENST00000515889 115 ntBASIC1.47□□□□□ -2.17
COPB1P53618 RNU6-781P-201ENST00000516377 101 ntBASIC1.47□□□□□ -2.17
COPB1P53618 RNU6-165P-201ENST00000517170 99 ntBASIC1.47□□□□□ -2.17
COPB1P53618 MIR548AO-201ENST00000579992 96 ntBASIC1.47□□□□□ -2.17
COPB1P53618 AL137067.1-201ENST00000615933 120 ntBASIC1.47□□□□□ -2.17
COPB1P53618 AC021613.1-201ENST00000623880 111 ntBASIC1.47□□□□□ -2.17
COPB1P53618 Y_RNA.116-201ENST00000363292 103 ntBASIC1.46□□□□□ -2.18
COPB1P53618 RNU6-392P-201ENST00000364926 101 ntBASIC1.46□□□□□ -2.18
COPB1P53618 Y_RNA.563-201ENST00000384707 108 ntBASIC1.46□□□□□ -2.18
COPB1P53618 RNU2-51P-201ENST00000410708 197 ntBASIC1.46□□□□□ -2.18
COPB1P53618 RNU6-772P-201ENST00000516042 105 ntBASIC1.46□□□□□ -2.18
COPB1P53618 AP003716.2-201ENST00000528260 108 ntBASIC1.46□□□□□ -2.18
COPB1P53618 AL512310.8-201ENST00000550183 120 ntBASIC1.46□□□□□ -2.18
COPB1P53618 AC133485.4-201ENST00000561835 220 ntBASIC1.46□□□□□ -2.18
COPB1P53618 AC138907.4-201ENST00000570107 226 ntBASIC1.46□□□□□ -2.18
COPB1P53618 MIR3937-201ENST00000580135 106 ntBASIC1.46□□□□□ -2.18
COPB1P53618 MIR4422-201ENST00000581938 83 ntBASIC1.46□□□□□ -2.18
COPB1P53618 MIR6717-201ENST00000622747 73 ntBASIC1.46□□□□□ -2.18
COPB1P53618 MIR6841-201ENST00000637129 72 ntBASIC1.46□□□□□ -2.18
COPB1P53618 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
COPB1P53618 RNA5SP205-201ENST00000364653 136 ntBASIC1.45□□□□□ -2.18
COPB1P53618 Y_RNA.291-201ENST00000364886 113 ntBASIC1.45□□□□□ -2.18
COPB1P53618 SNORD58C-201ENST00000365223 64 ntBASIC1.45□□□□□ -2.18
COPB1P53618 Y_RNA.355-201ENST00000365462 98 ntBASIC1.45□□□□□ -2.18
COPB1P53618 RNU6-1065P-201ENST00000384513 106 ntBASIC1.45□□□□□ -2.18
COPB1P53618 RNU6-1154P-201ENST00000391001 104 ntBASIC1.45□□□□□ -2.18
COPB1P53618 MIR1302-7-201ENST00000408841 72 ntBASIC1.45□□□□□ -2.18
COPB1P53618 Y_RNA.630-201ENST00000411370 108 ntBASIC1.45□□□□□ -2.18
COPB1P53618 POLR2J4-204ENST00000418424 324 ntBASIC1.45□□□□□ -2.18
COPB1P53618 RPL30P7-201ENST00000479312 323 ntBASIC1.45□□□□□ -2.18
COPB1P53618 RN7SKP179-201ENST00000516126 217 ntBASIC1.45□□□□□ -2.18
COPB1P53618 RNU6-902P-201ENST00000517212 91 ntBASIC1.45□□□□□ -2.18
COPB1P53618 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.45□□□□□ -2.18
COPB1P53618 MIR3914-2-201ENST00000637339 95 ntBASIC1.45□□□□□ -2.18
COPB1P53618 Z97988.1-201ENST00000637697 135 ntBASIC1.45□□□□□ -2.18
COPB1P53618 AL161722.3-201ENST00000605789 2983 ntBASIC1.44□□□□□ -2.18
COPB1P53618 RNA5SP48-201ENST00000363969 126 ntBASIC1.44□□□□□ -2.18
COPB1P53618 RNU4-16P-201ENST00000364737 141 ntBASIC1.44□□□□□ -2.18
COPB1P53618 Y_RNA.430-201ENST00000384081 110 ntBASIC1.44□□□□□ -2.18
COPB1P53618 RNA5SP144-201ENST00000410846 116 ntBASIC1.44□□□□□ -2.18
COPB1P53618 HMGN1P33-201ENST00000432945 451 ntBASIC1.44□□□□□ -2.18
COPB1P53618 RNU1-123P-201ENST00000458950 160 ntBASIC1.44□□□□□ -2.18
COPB1P53618 snoU13.18-201ENST00000459483 104 ntBASIC1.44□□□□□ -2.18
COPB1P53618 AL133373.1-201ENST00000497098 94 ntBASIC1.44□□□□□ -2.18
COPB1P53618 RNU6-313P-201ENST00000516317 112 ntBASIC1.44□□□□□ -2.18
COPB1P53618 RNU2-35P-201ENST00000516446 142 ntBASIC1.44□□□□□ -2.18
COPB1P53618 MIR4421-201ENST00000578133 69 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 193.7 ms