Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 OR2A41P-201ENST00000473586 105 ntBASIC0.97□□□□□ -2.25
LBX1P52954 AP003484.1-201ENST00000530974 250 ntBASIC0.97□□□□□ -2.25
LBX1P52954 MIR548AO-201ENST00000579992 96 ntBASIC0.97□□□□□ -2.25
LBX1P52954 AC141273.2-201ENST00000618989 130 ntBASIC0.97□□□□□ -2.25
LBX1P52954 AC134878.1-201ENST00000619901 243 ntBASIC0.97□□□□□ -2.25
LBX1P52954 MIR377-201ENST00000362145 69 ntBASIC0.96□□□□□ -2.26
LBX1P52954 RNU6-47P-201ENST00000383866 107 ntBASIC0.96□□□□□ -2.26
LBX1P52954 Y_RNA.410-201ENST00000383992 113 ntBASIC0.96□□□□□ -2.26
LBX1P52954 Y_RNA.440-201ENST00000384120 114 ntBASIC0.96□□□□□ -2.26
LBX1P52954 SNORA51.10-201ENST00000384418 136 ntBASIC0.96□□□□□ -2.26
LBX1P52954 MT-TN-201ENST00000387400 73 ntBASIC0.96□□□□□ -2.26
LBX1P52954 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.96□□□□□ -2.26
LBX1P52954 RNU2-70P-201ENST00000410718 179 ntBASIC0.96□□□□□ -2.26
LBX1P52954 MIR5197-201ENST00000583721 112 ntBASIC0.96□□□□□ -2.26
LBX1P52954 FAM71BP1-201ENST00000604431 523 ntBASIC0.96□□□□□ -2.26
LBX1P52954 AC243994.1-201ENST00000618627 109 ntBASIC0.96□□□□□ -2.26
LBX1P52954 AC243829.3-201ENST00000622177 108 ntBASIC0.96□□□□□ -2.26
LBX1P52954 MIR6516-201ENST00000630554 81 ntBASIC0.96□□□□□ -2.26
LBX1P52954 Y_RNA.83-201ENST00000363005 113 ntBASIC0.95□□□□□ -2.26
LBX1P52954 RNU6-1292P-201ENST00000383856 107 ntBASIC0.95□□□□□ -2.26
LBX1P52954 RNU6-643P-201ENST00000384018 107 ntBASIC0.95□□□□□ -2.26
LBX1P52954 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.95□□□□□ -2.26
LBX1P52954 Y_RNA.700-201ENST00000516806 100 ntBASIC0.95□□□□□ -2.26
LBX1P52954 RNU6-1271P-201ENST00000517049 105 ntBASIC0.95□□□□□ -2.26
LBX1P52954 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.95□□□□□ -2.26
LBX1P52954 MRPS18CP4-201ENST00000535821 231 ntBASIC0.95□□□□□ -2.26
LBX1P52954 AC013244.2-201ENST00000603396 103 ntBASIC0.95□□□□□ -2.26
LBX1P52954 RNA5SP347-201ENST00000362445 119 ntBASIC0.94□□□□□ -2.26
LBX1P52954 Y_RNA.241-201ENST00000364470 117 ntBASIC0.94□□□□□ -2.26
LBX1P52954 RNU6-913P-201ENST00000390913 95 ntBASIC0.94□□□□□ -2.26
LBX1P52954 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.94□□□□□ -2.26
LBX1P52954 RPS29P24-201ENST00000486345 171 ntBASIC0.94□□□□□ -2.26
LBX1P52954 RNU6-998P-201ENST00000515894 101 ntBASIC0.94□□□□□ -2.26
LBX1P52954 AC012676.2-201ENST00000619258 186 ntBASIC0.94□□□□□ -2.26
LBX1P52954 U6.106-201ENST00000636360 105 ntBASIC0.94□□□□□ -2.26
LBX1P52954 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
LBX1P52954 RNU6-654P-201ENST00000364373 107 ntBASIC0.93□□□□□ -2.26
LBX1P52954 SNORA27-201ENST00000384323 126 ntBASIC0.93□□□□□ -2.26
LBX1P52954 AC090844.1-201ENST00000422019 156 ntBASIC0.93□□□□□ -2.26
LBX1P52954 RNU7-90P-201ENST00000459216 62 ntBASIC0.93□□□□□ -2.26
LBX1P52954 snoU13.16-201ENST00000459350 104 ntBASIC0.93□□□□□ -2.26
LBX1P52954 SNORD124-201ENST00000459577 104 ntBASIC0.93□□□□□ -2.26
LBX1P52954 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.93□□□□□ -2.26
LBX1P52954 AC078938.1-201ENST00000620993 318 ntBASIC0.93□□□□□ -2.26
LBX1P52954 Z97988.1-201ENST00000637697 135 ntBASIC0.93□□□□□ -2.26
LBX1P52954 RNU6-580P-201ENST00000365159 107 ntBASIC0.92□□□□□ -2.26
LBX1P52954 SNORA22-201ENST00000383907 134 ntBASIC0.92□□□□□ -2.26
LBX1P52954 SNORA22C-201ENST00000384614 134 ntBASIC0.92□□□□□ -2.26
LBX1P52954 RNU7-96P-201ENST00000459535 64 ntBASIC0.92□□□□□ -2.26
LBX1P52954 RNA5SP67-201ENST00000516422 131 ntBASIC0.92□□□□□ -2.26
LBX1P52954 AC131055.1-201ENST00000584626 316 ntBASIC0.92□□□□□ -2.26
LBX1P52954 MIR8055-201ENST00000610739 97 ntBASIC0.92□□□□□ -2.26
LBX1P52954 Y_RNA.182-201ENST00000363880 111 ntBASIC0.91□□□□□ -2.26
LBX1P52954 Y_RNA.233-201ENST00000364407 101 ntBASIC0.91□□□□□ -2.26
LBX1P52954 RNU6-200P-201ENST00000364743 107 ntBASIC0.91□□□□□ -2.26
LBX1P52954 RNU6-597P-201ENST00000365620 102 ntBASIC0.91□□□□□ -2.26
LBX1P52954 RNU6-1189P-201ENST00000383958 107 ntBASIC0.91□□□□□ -2.26
LBX1P52954 RNU6-125P-201ENST00000384505 107 ntBASIC0.91□□□□□ -2.26
LBX1P52954 RNU4-70P-201ENST00000384579 139 ntBASIC0.91□□□□□ -2.26
LBX1P52954 MIR624-201ENST00000385217 97 ntBASIC0.91□□□□□ -2.26
LBX1P52954 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
LBX1P52954 AL121914.1-201ENST00000450188 156 ntBASIC0.91□□□□□ -2.26
LBX1P52954 MIR2115-201ENST00000516657 100 ntBASIC0.91□□□□□ -2.26
LBX1P52954 SCARNA15-202ENST00000516881 127 ntBASIC0.91□□□□□ -2.26
LBX1P52954 MIR378D2-201ENST00000580636 98 ntBASIC0.91□□□□□ -2.26
LBX1P52954 AC106800.4-201ENST00000614905 153 ntBASIC0.91□□□□□ -2.26
LBX1P52954 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
LBX1P52954 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
LBX1P52954 RNU6-1020P-201ENST00000363684 107 ntBASIC0.9□□□□□ -2.27
LBX1P52954 Y_RNA.168-201ENST00000363740 102 ntBASIC0.9□□□□□ -2.27
LBX1P52954 RNU6-1067P-201ENST00000384752 107 ntBASIC0.9□□□□□ -2.27
LBX1P52954 MIR200A-201ENST00000384875 90 ntBASIC0.9□□□□□ -2.27
LBX1P52954 SNORA26.6-201ENST00000391256 115 ntBASIC0.9□□□□□ -2.27
LBX1P52954 RNU6-138P-201ENST00000515952 107 ntBASIC0.9□□□□□ -2.27
LBX1P52954 Y_RNA.797-201ENST00000515977 94 ntBASIC0.9□□□□□ -2.27
LBX1P52954 RNU6-1219P-201ENST00000516143 112 ntBASIC0.9□□□□□ -2.27
LBX1P52954 RNU6-388P-201ENST00000517012 105 ntBASIC0.9□□□□□ -2.27
LBX1P52954 RNU6-389P-201ENST00000517048 105 ntBASIC0.9□□□□□ -2.27
LBX1P52954 MIR4431-201ENST00000579990 94 ntBASIC0.9□□□□□ -2.27
LBX1P52954 MIR3129-201ENST00000581095 76 ntBASIC0.9□□□□□ -2.27
LBX1P52954 Y_RNA.297-201ENST00000364950 91 ntBASIC0.89□□□□□ -2.27
LBX1P52954 Y_RNA.785-201ENST00000384290 109 ntBASIC0.89□□□□□ -2.27
LBX1P52954 Y_RNA.552-201ENST00000384665 112 ntBASIC0.89□□□□□ -2.27
LBX1P52954 SNORA79-201ENST00000408376 140 ntBASIC0.89□□□□□ -2.27
LBX1P52954 RNU5E-9P-201ENST00000411164 104 ntBASIC0.89□□□□□ -2.27
LBX1P52954 Y_RNA.644-201ENST00000459006 113 ntBASIC0.89□□□□□ -2.27
LBX1P52954 RNU7-120P-201ENST00000459334 63 ntBASIC0.89□□□□□ -2.27
LBX1P52954 Y_RNA.674-201ENST00000516362 113 ntBASIC0.89□□□□□ -2.27
LBX1P52954 SNORD116-25-201ENST00000516517 92 ntBASIC0.89□□□□□ -2.27
LBX1P52954 AC004812.1-201ENST00000540773 146 ntBASIC0.89□□□□□ -2.27
LBX1P52954 MIR5589-201ENST00000579442 60 ntBASIC0.89□□□□□ -2.27
LBX1P52954 RNU6-369P-201ENST00000362515 102 ntBASIC0.88□□□□□ -2.27
LBX1P52954 Y_RNA.240-201ENST00000364469 95 ntBASIC0.88□□□□□ -2.27
LBX1P52954 RNU6-312P-201ENST00000364629 107 ntBASIC0.88□□□□□ -2.27
LBX1P52954 MIR548I3-201ENST00000408378 149 ntBASIC0.88□□□□□ -2.27
LBX1P52954 RNU6-1190P-201ENST00000410811 104 ntBASIC0.88□□□□□ -2.27
LBX1P52954 AC107297.1-201ENST00000459991 176 ntBASIC0.88□□□□□ -2.27
LBX1P52954 UBL5P1-201ENST00000507979 193 ntBASIC0.88□□□□□ -2.27
LBX1P52954 RNU7-53P-201ENST00000516705 60 ntBASIC0.88□□□□□ -2.27
LBX1P52954 AC022559.1-201ENST00000520905 205 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms