Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 Y_RNA.674-201ENST00000516362 113 ntBASIC1.06□□□□□ -2.24
NEK3P51956 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.06□□□□□ -2.24
NEK3P51956 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
NEK3P51956 MIR342-201ENST00000362212 99 ntBASIC1.05□□□□□ -2.24
NEK3P51956 Y_RNA.116-201ENST00000363292 103 ntBASIC1.05□□□□□ -2.24
NEK3P51956 Y_RNA.224-201ENST00000364308 111 ntBASIC1.05□□□□□ -2.24
NEK3P51956 Y_RNA.297-201ENST00000364950 91 ntBASIC1.05□□□□□ -2.24
NEK3P51956 RNU6-47P-201ENST00000383866 107 ntBASIC1.05□□□□□ -2.24
NEK3P51956 Y_RNA.521-201ENST00000384560 114 ntBASIC1.05□□□□□ -2.24
NEK3P51956 MIR608-201ENST00000384820 100 ntBASIC1.05□□□□□ -2.24
NEK3P51956 RNU6-1319P-201ENST00000390855 104 ntBASIC1.05□□□□□ -2.24
NEK3P51956 RNU6-205P-201ENST00000390858 107 ntBASIC1.05□□□□□ -2.24
NEK3P51956 RNU6-747P-201ENST00000390928 104 ntBASIC1.05□□□□□ -2.24
NEK3P51956 SNORD89-201ENST00000390981 114 ntBASIC1.05□□□□□ -2.24
NEK3P51956 RNU6-241P-201ENST00000391148 104 ntBASIC1.05□□□□□ -2.24
NEK3P51956 RNU6-177P-201ENST00000411257 104 ntBASIC1.05□□□□□ -2.24
NEK3P51956 MIR18B-201ENST00000454574 71 ntBASIC1.05□□□□□ -2.24
NEK3P51956 AC211469.2-201ENST00000605461 205 ntBASIC1.05□□□□□ -2.24
NEK3P51956 MIR6717-201ENST00000622747 73 ntBASIC1.05□□□□□ -2.24
NEK3P51956 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.04□□□□□ -2.24
NEK3P51956 RNU6-200P-201ENST00000364743 107 ntBASIC1.04□□□□□ -2.24
NEK3P51956 RNU1-133P-201ENST00000364867 167 ntBASIC1.04□□□□□ -2.24
NEK3P51956 SNORA22-201ENST00000383907 134 ntBASIC1.04□□□□□ -2.24
NEK3P51956 Y_RNA.393-201ENST00000383936 102 ntBASIC1.04□□□□□ -2.24
NEK3P51956 SNORA22C-201ENST00000384614 134 ntBASIC1.04□□□□□ -2.24
NEK3P51956 SNORA26.6-201ENST00000391256 115 ntBASIC1.04□□□□□ -2.24
NEK3P51956 RNU6-893P-201ENST00000458841 100 ntBASIC1.04□□□□□ -2.24
NEK3P51956 MIR4452-201ENST00000583004 71 ntBASIC1.04□□□□□ -2.24
NEK3P51956 SNORD114-21-201ENST00000606412 72 ntBASIC1.04□□□□□ -2.24
NEK3P51956 Y_RNA.274-201ENST00000364714 101 ntBASIC1.03□□□□□ -2.24
NEK3P51956 RNU6-934P-201ENST00000365154 107 ntBASIC1.03□□□□□ -2.24
NEK3P51956 Y_RNA.337-201ENST00000365312 102 ntBASIC1.03□□□□□ -2.24
NEK3P51956 SNORA20-201ENST00000384662 132 ntBASIC1.03□□□□□ -2.24
NEK3P51956 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.03□□□□□ -2.24
NEK3P51956 HMGN1P33-201ENST00000432945 451 ntBASIC1.03□□□□□ -2.24
NEK3P51956 SEPT7P4-201ENST00000437076 306 ntBASIC1.03□□□□□ -2.24
NEK3P51956 snoU13.2-201ENST00000459201 104 ntBASIC1.03□□□□□ -2.24
NEK3P51956 SCARNA15-202ENST00000516881 127 ntBASIC1.03□□□□□ -2.24
NEK3P51956 AL353765.1-201ENST00000605514 183 ntBASIC1.03□□□□□ -2.24
NEK3P51956 RNU1-93P-201ENST00000364704 169 ntBASIC1.02□□□□□ -2.25
NEK3P51956 SNORD114-22-201ENST00000365423 72 ntBASIC1.02□□□□□ -2.25
NEK3P51956 Y_RNA.793-201ENST00000411222 111 ntBASIC1.02□□□□□ -2.25
NEK3P51956 RPS26P5-201ENST00000418544 335 ntBASIC1.02□□□□□ -2.25
NEK3P51956 AL596211.1-201ENST00000569873 2277 ntBASIC1.02□□□□□ -2.25
NEK3P51956 RNU4-38P-201ENST00000364472 129 ntBASIC1.01□□□□□ -2.25
NEK3P51956 MIR100-201ENST00000385259 80 ntBASIC1.01□□□□□ -2.25
NEK3P51956 AP002392.1-201ENST00000537692 208 ntBASIC1.01□□□□□ -2.25
NEK3P51956 MIR3646-201ENST00000578301 84 ntBASIC1.01□□□□□ -2.25
NEK3P51956 RNU6-1187P-201ENST00000364771 110 ntBASIC1□□□□□ -2.25
NEK3P51956 Y_RNA.357-201ENST00000365487 109 ntBASIC1□□□□□ -2.25
NEK3P51956 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1□□□□□ -2.25
NEK3P51956 Y_RNA.508-201ENST00000384502 114 ntBASIC1□□□□□ -2.25
NEK3P51956 MIR588-201ENST00000384900 83 ntBASIC1□□□□□ -2.25
NEK3P51956 MIR563-201ENST00000385080 79 ntBASIC1□□□□□ -2.25
NEK3P51956 MT-TF-201ENST00000387314 71 ntBASIC1□□□□□ -2.25
NEK3P51956 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1□□□□□ -2.25
NEK3P51956 RNU6-1190P-201ENST00000410811 104 ntBASIC1□□□□□ -2.25
NEK3P51956 RNU6-1219P-201ENST00000516143 112 ntBASIC1□□□□□ -2.25
NEK3P51956 RNU6-113P-201ENST00000516653 101 ntBASIC1□□□□□ -2.25
NEK3P51956 RNU6-1149P-201ENST00000516810 97 ntBASIC1□□□□□ -2.25
NEK3P51956 AC078938.1-201ENST00000620993 318 ntBASIC1□□□□□ -2.25
NEK3P51956 MIR6767-201ENST00000637302 66 ntBASIC1□□□□□ -2.25
NEK3P51956 SNORD105-201ENST00000386910 85 ntBASIC0.99□□□□□ -2.25
NEK3P51956 RNU6-1165P-201ENST00000410119 107 ntBASIC0.99□□□□□ -2.25
NEK3P51956 RNU7-120P-201ENST00000459334 63 ntBASIC0.99□□□□□ -2.25
NEK3P51956 RPL39P28-201ENST00000465655 155 ntBASIC0.99□□□□□ -2.25
NEK3P51956 ACA64.5-201ENST00000516207 127 ntBASIC0.99□□□□□ -2.25
NEK3P51956 RNU6-388P-201ENST00000517012 105 ntBASIC0.99□□□□□ -2.25
NEK3P51956 RNU6-389P-201ENST00000517048 105 ntBASIC0.99□□□□□ -2.25
NEK3P51956 MIR6740-201ENST00000618268 113 ntBASIC0.99□□□□□ -2.25
NEK3P51956 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.99□□□□□ -2.25
NEK3P51956 RNU6-110P-201ENST00000384508 104 ntBASIC0.98□□□□□ -2.25
NEK3P51956 MIR4653-201ENST00000585107 83 ntBASIC0.98□□□□□ -2.25
NEK3P51956 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.98□□□□□ -2.25
NEK3P51956 AC021613.1-201ENST00000623880 111 ntBASIC0.98□□□□□ -2.25
NEK3P51956 Y_RNA.29-201ENST00000362570 113 ntBASIC0.97□□□□□ -2.25
NEK3P51956 Y_RNA.240-201ENST00000364469 95 ntBASIC0.97□□□□□ -2.25
NEK3P51956 Y_RNA.257-201ENST00000364596 102 ntBASIC0.97□□□□□ -2.25
NEK3P51956 RNU6-1318P-201ENST00000365389 103 ntBASIC0.97□□□□□ -2.25
NEK3P51956 Y_RNA.785-201ENST00000384290 109 ntBASIC0.97□□□□□ -2.25
NEK3P51956 RNU6-239P-201ENST00000390990 99 ntBASIC0.97□□□□□ -2.25
NEK3P51956 SNORA75.5-201ENST00000391291 81 ntBASIC0.97□□□□□ -2.25
NEK3P51956 snoU13.18-201ENST00000459483 104 ntBASIC0.97□□□□□ -2.25
NEK3P51956 RNA5SP220-201ENST00000516298 104 ntBASIC0.97□□□□□ -2.25
NEK3P51956 AL078603.1-201ENST00000603824 313 ntBASIC0.97□□□□□ -2.25
NEK3P51956 MIR6841-201ENST00000637129 72 ntBASIC0.97□□□□□ -2.25
NEK3P51956 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
NEK3P51956 RNU6-768P-201ENST00000384683 107 ntBASIC0.96□□□□□ -2.26
NEK3P51956 MIR520E-201ENST00000384867 87 ntBASIC0.96□□□□□ -2.26
NEK3P51956 MIR532-201ENST00000385025 91 ntBASIC0.96□□□□□ -2.26
NEK3P51956 RNU6-138P-201ENST00000515952 107 ntBASIC0.96□□□□□ -2.26
NEK3P51956 RNU6-977P-201ENST00000516411 103 ntBASIC0.96□□□□□ -2.26
NEK3P51956 MIR4771-2-201ENST00000577758 74 ntBASIC0.96□□□□□ -2.26
NEK3P51956 MIR4771-1-201ENST00000582617 74 ntBASIC0.96□□□□□ -2.26
NEK3P51956 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.95□□□□□ -2.26
NEK3P51956 MTND5P32-201ENST00000560711 1802 ntBASIC0.95□□□□□ -2.26
NEK3P51956 RNU6-369P-201ENST00000362515 102 ntBASIC0.95□□□□□ -2.26
NEK3P51956 Y_RNA.355-201ENST00000365462 98 ntBASIC0.95□□□□□ -2.26
NEK3P51956 SNORD99-201ENST00000408612 74 ntBASIC0.95□□□□□ -2.26
NEK3P51956 SNORD83.1-201ENST00000411362 77 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 206.5 ms