Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 MIR30D-201ENST00000362283 70 ntBASIC0.22□□□□□ -2.37
CXCL12P48061 Y_RNA.152-201ENST00000363578 100 ntBASIC0.22□□□□□ -2.37
CXCL12P48061 Y_RNA.153-201ENST00000363615 91 ntBASIC0.22□□□□□ -2.37
CXCL12P48061 Y_RNA.274-201ENST00000364714 101 ntBASIC0.22□□□□□ -2.37
CXCL12P48061 RNU6-484P-201ENST00000384016 107 ntBASIC0.22□□□□□ -2.37
CXCL12P48061 Y_RNA.440-201ENST00000384120 114 ntBASIC0.22□□□□□ -2.37
CXCL12P48061 RNA5SP299-201ENST00000391203 116 ntBASIC0.22□□□□□ -2.37
CXCL12P48061 Y_RNA.622-201ENST00000411091 108 ntBASIC0.22□□□□□ -2.37
CXCL12P48061 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.22□□□□□ -2.37
CXCL12P48061 RNU7-45P-201ENST00000459460 63 ntBASIC0.22□□□□□ -2.37
CXCL12P48061 HAR1A.1-201ENST00000459583 118 ntBASIC0.22□□□□□ -2.37
CXCL12P48061 RNU6-1338P-201ENST00000516328 91 ntBASIC0.22□□□□□ -2.37
CXCL12P48061 MIR3171-201ENST00000584270 74 ntBASIC0.22□□□□□ -2.37
CXCL12P48061 SNORD92-201ENST00000585078 85 ntBASIC0.22□□□□□ -2.37
CXCL12P48061 MIR103A1-201ENST00000362165 78 ntBASIC0.21□□□□□ -2.38
CXCL12P48061 Y_RNA.275-201ENST00000364726 110 ntBASIC0.21□□□□□ -2.38
CXCL12P48061 RNU6-1189P-201ENST00000383958 107 ntBASIC0.21□□□□□ -2.38
CXCL12P48061 MIR329-2-201ENST00000385029 84 ntBASIC0.21□□□□□ -2.38
CXCL12P48061 RNU6-1203P-201ENST00000410703 110 ntBASIC0.21□□□□□ -2.38
CXCL12P48061 SNRPGP8-201ENST00000454064 226 ntBASIC0.21□□□□□ -2.38
CXCL12P48061 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.21□□□□□ -2.38
CXCL12P48061 RNU6-1143P-201ENST00000516125 104 ntBASIC0.21□□□□□ -2.38
CXCL12P48061 SNORA25.12-201ENST00000516202 82 ntBASIC0.21□□□□□ -2.38
CXCL12P48061 RNA5SP94-201ENST00000516917 108 ntBASIC0.21□□□□□ -2.38
CXCL12P48061 Y_RNA.294-201ENST00000364916 102 ntBASIC0.2□□□□□ -2.38
CXCL12P48061 Y_RNA.304-201ENST00000365011 112 ntBASIC0.2□□□□□ -2.38
CXCL12P48061 Y_RNA.410-201ENST00000383992 113 ntBASIC0.2□□□□□ -2.38
CXCL12P48061 SNORA1-201ENST00000384107 130 ntBASIC0.2□□□□□ -2.38
CXCL12P48061 Y_RNA.535-201ENST00000384612 99 ntBASIC0.2□□□□□ -2.38
CXCL12P48061 MIR518A1-201ENST00000385068 85 ntBASIC0.2□□□□□ -2.38
CXCL12P48061 RNU6-1228P-201ENST00000391014 107 ntBASIC0.2□□□□□ -2.38
CXCL12P48061 SNORA26-201ENST00000391286 122 ntBASIC0.2□□□□□ -2.38
CXCL12P48061 RNU6-651P-201ENST00000411040 105 ntBASIC0.2□□□□□ -2.38
CXCL12P48061 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.2□□□□□ -2.38
CXCL12P48061 RNU6-570P-201ENST00000517051 105 ntBASIC0.2□□□□□ -2.38
CXCL12P48061 AC020661.2-201ENST00000560114 134 ntBASIC0.2□□□□□ -2.38
CXCL12P48061 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.2□□□□□ -2.38
CXCL12P48061 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
CXCL12P48061 AP001282.2-201ENST00000616149 309 ntBASIC0.2□□□□□ -2.38
CXCL12P48061 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.2□□□□□ -2.38
CXCL12P48061 MIR6717-201ENST00000622747 73 ntBASIC0.2□□□□□ -2.38
CXCL12P48061 MIR376A2-201ENST00000636782 80 ntBASIC0.2□□□□□ -2.38
CXCL12P48061 Y_RNA.61-201ENST00000362835 102 ntBASIC0.19□□□□□ -2.38
CXCL12P48061 SNORD44.1-201ENST00000363202 61 ntBASIC0.19□□□□□ -2.38
CXCL12P48061 snoU2_19.4-201ENST00000364329 80 ntBASIC0.19□□□□□ -2.38
CXCL12P48061 Y_RNA.432-201ENST00000384087 111 ntBASIC0.19□□□□□ -2.38
CXCL12P48061 MT-TF-201ENST00000387314 71 ntBASIC0.19□□□□□ -2.38
CXCL12P48061 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.19□□□□□ -2.38
CXCL12P48061 SNORA26.6-201ENST00000391256 115 ntBASIC0.19□□□□□ -2.38
CXCL12P48061 AL606845.1-201ENST00000404881 255 ntBASIC0.19□□□□□ -2.38
CXCL12P48061 SNORA40.8-201ENST00000411034 126 ntBASIC0.19□□□□□ -2.38
CXCL12P48061 RNU2-55P-201ENST00000411146 174 ntBASIC0.19□□□□□ -2.38
CXCL12P48061 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.19□□□□□ -2.38
CXCL12P48061 RNU6-453P-201ENST00000516819 85 ntBASIC0.19□□□□□ -2.38
CXCL12P48061 MIR3678-201ENST00000578455 94 ntBASIC0.19□□□□□ -2.38
CXCL12P48061 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.19□□□□□ -2.38
CXCL12P48061 SNORA25.18-201ENST00000607153 114 ntBASIC0.19□□□□□ -2.38
CXCL12P48061 MIR6759-201ENST00000638110 65 ntBASIC0.19□□□□□ -2.38
CXCL12P48061 AC090625.1-201ENST00000357130 210 ntBASIC0.18□□□□□ -2.38
CXCL12P48061 MIR302B-201ENST00000362188 73 ntBASIC0.18□□□□□ -2.38
CXCL12P48061 Y_RNA.23-201ENST00000362496 106 ntBASIC0.18□□□□□ -2.38
CXCL12P48061 RNU6-740P-201ENST00000364734 105 ntBASIC0.18□□□□□ -2.38
CXCL12P48061 RNU5E-4P-201ENST00000364931 120 ntBASIC0.18□□□□□ -2.38
CXCL12P48061 RNA5SP117-201ENST00000365294 118 ntBASIC0.18□□□□□ -2.38
CXCL12P48061 RNU6-597P-201ENST00000365620 102 ntBASIC0.18□□□□□ -2.38
CXCL12P48061 AC113618.1-201ENST00000416747 285 ntBASIC0.18□□□□□ -2.38
CXCL12P48061 SNRPGP12-201ENST00000449481 213 ntBASIC0.18□□□□□ -2.38
CXCL12P48061 AC108740.1-201ENST00000498629 225 ntBASIC0.18□□□□□ -2.38
CXCL12P48061 RNA5SP153-201ENST00000516498 76 ntBASIC0.18□□□□□ -2.38
CXCL12P48061 RNU6-448P-201ENST00000517052 107 ntBASIC0.18□□□□□ -2.38
CXCL12P48061 MIR5190-201ENST00000581537 80 ntBASIC0.18□□□□□ -2.38
CXCL12P48061 Y_RNA.44-201ENST00000362676 108 ntBASIC0.17□□□□□ -2.38
CXCL12P48061 Y_RNA.199-201ENST00000364014 102 ntBASIC0.17□□□□□ -2.38
CXCL12P48061 RNU6-867P-201ENST00000364956 107 ntBASIC0.17□□□□□ -2.38
CXCL12P48061 Y_RNA.351-201ENST00000365436 96 ntBASIC0.17□□□□□ -2.38
CXCL12P48061 RNY3P5-201ENST00000384127 102 ntBASIC0.17□□□□□ -2.38
CXCL12P48061 SNORD93-201ENST00000408813 74 ntBASIC0.17□□□□□ -2.38
CXCL12P48061 SNORD71-201ENST00000411292 86 ntBASIC0.17□□□□□ -2.38
CXCL12P48061 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.17□□□□□ -2.38
CXCL12P48061 AC022523.2-201ENST00000561045 150 ntBASIC0.17□□□□□ -2.38
CXCL12P48061 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.17□□□□□ -2.38
CXCL12P48061 AP001094.1-201ENST00000579805 193 ntBASIC0.17□□□□□ -2.38
CXCL12P48061 AC097639.2-201ENST00000603159 172 ntBASIC0.17□□□□□ -2.38
CXCL12P48061 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.17□□□□□ -2.38
CXCL12P48061 MIR6086-201ENST00000638065 55 ntBASIC0.17□□□□□ -2.38
CXCL12P48061 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.16□□□□□ -2.38
CXCL12P48061 Y_RNA.237-201ENST00000364439 102 ntBASIC0.16□□□□□ -2.38
CXCL12P48061 RNU6-1327P-201ENST00000365302 105 ntBASIC0.16□□□□□ -2.38
CXCL12P48061 SNORA8.2-201ENST00000384372 139 ntBASIC0.16□□□□□ -2.38
CXCL12P48061 Y_RNA.567-201ENST00000384736 106 ntBASIC0.16□□□□□ -2.38
CXCL12P48061 MIR616-201ENST00000385293 97 ntBASIC0.16□□□□□ -2.38
CXCL12P48061 RNU6-985P-201ENST00000410182 104 ntBASIC0.16□□□□□ -2.38
CXCL12P48061 Y_RNA.617-201ENST00000410920 90 ntBASIC0.16□□□□□ -2.38
CXCL12P48061 RNU6-561P-201ENST00000516222 102 ntBASIC0.16□□□□□ -2.38
CXCL12P48061 AC133485.4-201ENST00000561835 220 ntBASIC0.16□□□□□ -2.38
CXCL12P48061 MIR3129-201ENST00000581095 76 ntBASIC0.16□□□□□ -2.38
CXCL12P48061 MIR8066-201ENST00000617280 78 ntBASIC0.16□□□□□ -2.38
CXCL12P48061 SNORD118-201ENST00000363593 134 ntBASIC0.15□□□□□ -2.39
CXCL12P48061 Y_RNA.202-201ENST00000364083 110 ntBASIC0.15□□□□□ -2.39
CXCL12P48061 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 164.5 ms