Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.95□□□□□ -2.26
NKX2-1P43699 MIR6717-201ENST00000622747 73 ntBASIC0.95□□□□□ -2.26
NKX2-1P43699 MIR6841-201ENST00000637129 72 ntBASIC0.95□□□□□ -2.26
NKX2-1P43699 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
NKX2-1P43699 SNORA7.1-201ENST00000363750 139 ntBASIC0.94□□□□□ -2.26
NKX2-1P43699 RNU1-133P-201ENST00000364867 167 ntBASIC0.94□□□□□ -2.26
NKX2-1P43699 SNORD38B-201ENST00000384690 67 ntBASIC0.94□□□□□ -2.26
NKX2-1P43699 SNORD111-201ENST00000408139 94 ntBASIC0.94□□□□□ -2.26
NKX2-1P43699 RNU6-602P-201ENST00000411155 105 ntBASIC0.94□□□□□ -2.26
NKX2-1P43699 MRPL35P3-201ENST00000421557 364 ntBASIC0.94□□□□□ -2.26
NKX2-1P43699 AC244023.1-201ENST00000426884 112 ntBASIC0.94□□□□□ -2.26
NKX2-1P43699 RNU7-95P-201ENST00000459222 64 ntBASIC0.94□□□□□ -2.26
NKX2-1P43699 RNU2-60P-201ENST00000517290 128 ntBASIC0.94□□□□□ -2.26
NKX2-1P43699 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.94□□□□□ -2.26
NKX2-1P43699 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.94□□□□□ -2.26
NKX2-1P43699 AC242498.1-201ENST00000604134 111 ntBASIC0.94□□□□□ -2.26
NKX2-1P43699 AC106800.4-201ENST00000614905 153 ntBASIC0.94□□□□□ -2.26
NKX2-1P43699 SNORD38B-202ENST00000625943 69 ntBASIC0.94□□□□□ -2.26
NKX2-1P43699 AC008163.1-202ENST00000636004 2889 ntBASIC0.93□□□□□ -2.26
NKX2-1P43699 MIR302B-201ENST00000362188 73 ntBASIC0.93□□□□□ -2.26
NKX2-1P43699 SNORA25.3-201ENST00000363205 127 ntBASIC0.93□□□□□ -2.26
NKX2-1P43699 SNORD113.3-201ENST00000364630 78 ntBASIC0.93□□□□□ -2.26
NKX2-1P43699 Y_RNA.584-201ENST00000391090 114 ntBASIC0.93□□□□□ -2.26
NKX2-1P43699 RPS3AP1-201ENST00000413190 320 ntBASIC0.93□□□□□ -2.26
NKX2-1P43699 RNU7-200P-201ENST00000516105 62 ntBASIC0.93□□□□□ -2.26
NKX2-1P43699 AC036111.3-201ENST00000526389 112 ntBASIC0.93□□□□□ -2.26
NKX2-1P43699 MIR548X2-201ENST00000579776 100 ntBASIC0.93□□□□□ -2.26
NKX2-1P43699 MIR4661-201ENST00000582720 75 ntBASIC0.93□□□□□ -2.26
NKX2-1P43699 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.93□□□□□ -2.26
NKX2-1P43699 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.93□□□□□ -2.26
NKX2-1P43699 AP000753.3-201ENST00000604083 169 ntBASIC0.93□□□□□ -2.26
NKX2-1P43699 MIR3658-201ENST00000636291 56 ntBASIC0.93□□□□□ -2.26
NKX2-1P43699 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.93□□□□□ -2.26
NKX2-1P43699 SNORA1.1-201ENST00000364671 133 ntBASIC0.92□□□□□ -2.26
NKX2-1P43699 RNU6-1130P-201ENST00000365434 107 ntBASIC0.92□□□□□ -2.26
NKX2-1P43699 Y_RNA.398-201ENST00000383952 99 ntBASIC0.92□□□□□ -2.26
NKX2-1P43699 RNU6-804P-201ENST00000384286 107 ntBASIC0.92□□□□□ -2.26
NKX2-1P43699 RNU6-125P-201ENST00000384505 107 ntBASIC0.92□□□□□ -2.26
NKX2-1P43699 MIR563-201ENST00000385080 79 ntBASIC0.92□□□□□ -2.26
NKX2-1P43699 UBL5P1-201ENST00000507979 193 ntBASIC0.92□□□□□ -2.26
NKX2-1P43699 RNU7-70P-201ENST00000516941 66 ntBASIC0.92□□□□□ -2.26
NKX2-1P43699 AC021613.1-201ENST00000623880 111 ntBASIC0.92□□□□□ -2.26
NKX2-1P43699 MIR378A-201ENST00000362177 66 ntBASIC0.91□□□□□ -2.26
NKX2-1P43699 SNORD115-2-201ENST00000362842 82 ntBASIC0.91□□□□□ -2.26
NKX2-1P43699 Y_RNA.170-201ENST00000363746 110 ntBASIC0.91□□□□□ -2.26
NKX2-1P43699 RNU6-151P-201ENST00000364158 107 ntBASIC0.91□□□□□ -2.26
NKX2-1P43699 Y_RNA.215-201ENST00000364204 112 ntBASIC0.91□□□□□ -2.26
NKX2-1P43699 SNORD115-20-201ENST00000365099 82 ntBASIC0.91□□□□□ -2.26
NKX2-1P43699 SNORD50.2-201ENST00000365465 70 ntBASIC0.91□□□□□ -2.26
NKX2-1P43699 RNU6-209P-201ENST00000384118 107 ntBASIC0.91□□□□□ -2.26
NKX2-1P43699 RNY1P6-201ENST00000384193 109 ntBASIC0.91□□□□□ -2.26
NKX2-1P43699 BTF3P4-201ENST00000418852 495 ntBASIC0.91□□□□□ -2.26
NKX2-1P43699 FABP5P4-201ENST00000437203 171 ntBASIC0.91□□□□□ -2.26
NKX2-1P43699 MIR3121-201ENST00000579680 77 ntBASIC0.91□□□□□ -2.26
NKX2-1P43699 AL157834.3-201ENST00000615543 103 ntBASIC0.91□□□□□ -2.26
NKX2-1P43699 AL353770.2-201ENST00000620024 78 ntBASIC0.91□□□□□ -2.26
NKX2-1P43699 RNU4-11P-201ENST00000365287 132 ntBASIC0.9□□□□□ -2.27
NKX2-1P43699 SNORD18B-201ENST00000365659 72 ntBASIC0.9□□□□□ -2.27
NKX2-1P43699 RNU6-1336P-201ENST00000383886 109 ntBASIC0.9□□□□□ -2.27
NKX2-1P43699 RNU6-1062P-201ENST00000383908 107 ntBASIC0.9□□□□□ -2.27
NKX2-1P43699 Y_RNA.506-201ENST00000384494 102 ntBASIC0.9□□□□□ -2.27
NKX2-1P43699 SNORD37.2-201ENST00000391075 66 ntBASIC0.9□□□□□ -2.27
NKX2-1P43699 AC090844.1-201ENST00000422019 156 ntBASIC0.9□□□□□ -2.27
NKX2-1P43699 snoU13.2-201ENST00000459201 104 ntBASIC0.9□□□□□ -2.27
NKX2-1P43699 RNU6-1053P-201ENST00000515930 101 ntBASIC0.9□□□□□ -2.27
NKX2-1P43699 AC104465.1-201ENST00000611365 139 ntBASIC0.9□□□□□ -2.27
NKX2-1P43699 AC021753.1-201ENST00000635724 168 ntBASIC0.9□□□□□ -2.27
NKX2-1P43699 SNORD116-18-201ENST00000383961 92 ntBASIC0.89□□□□□ -2.27
NKX2-1P43699 MIR513C-201ENST00000401352 84 ntBASIC0.89□□□□□ -2.27
NKX2-1P43699 AP1B1P2-201ENST00000416196 106 ntBASIC0.89□□□□□ -2.27
NKX2-1P43699 POLR2J4-204ENST00000418424 324 ntBASIC0.89□□□□□ -2.27
NKX2-1P43699 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.89□□□□□ -2.27
NKX2-1P43699 RNU6-255P-201ENST00000516957 105 ntBASIC0.89□□□□□ -2.27
NKX2-1P43699 AL596211.1-201ENST00000569873 2277 ntBASIC0.89□□□□□ -2.27
NKX2-1P43699 RNY1P11-201ENST00000363759 113 ntBASIC0.88□□□□□ -2.27
NKX2-1P43699 Y_RNA.280-201ENST00000364765 112 ntBASIC0.88□□□□□ -2.27
NKX2-1P43699 Y_RNA.330-201ENST00000365230 109 ntBASIC0.88□□□□□ -2.27
NKX2-1P43699 SNORA22-201ENST00000383907 134 ntBASIC0.88□□□□□ -2.27
NKX2-1P43699 SNORA22C-201ENST00000384614 134 ntBASIC0.88□□□□□ -2.27
NKX2-1P43699 MIR569-201ENST00000385228 96 ntBASIC0.88□□□□□ -2.27
NKX2-1P43699 MT-TR-201ENST00000387439 65 ntBASIC0.88□□□□□ -2.27
NKX2-1P43699 MIR18B-201ENST00000454574 71 ntBASIC0.88□□□□□ -2.27
NKX2-1P43699 Y_RNA.651-201ENST00000459380 103 ntBASIC0.88□□□□□ -2.27
NKX2-1P43699 MIR4295-201ENST00000585286 85 ntBASIC0.88□□□□□ -2.27
NKX2-1P43699 AC103810.9-201ENST00000606688 112 ntBASIC0.88□□□□□ -2.27
NKX2-1P43699 RNA5SP144-201ENST00000410846 116 ntBASIC0.87□□□□□ -2.27
NKX2-1P43699 SNORD124-201ENST00000459577 104 ntBASIC0.87□□□□□ -2.27
NKX2-1P43699 MTND5P41-201ENST00000517498 206 ntBASIC0.87□□□□□ -2.27
NKX2-1P43699 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.87□□□□□ -2.27
NKX2-1P43699 MIR6078-201ENST00000611069 100 ntBASIC0.87□□□□□ -2.27
NKX2-1P43699 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.87□□□□□ -2.27
NKX2-1P43699 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.87□□□□□ -2.27
NKX2-1P43699 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
NKX2-1P43699 RNY1P10-201ENST00000363268 113 ntBASIC0.86□□□□□ -2.27
NKX2-1P43699 RNU6-654P-201ENST00000364373 107 ntBASIC0.86□□□□□ -2.27
NKX2-1P43699 RNU1-36P-201ENST00000365130 165 ntBASIC0.86□□□□□ -2.27
NKX2-1P43699 RNU6-746P-201ENST00000384112 109 ntBASIC0.86□□□□□ -2.27
NKX2-1P43699 Y_RNA.488-201ENST00000384403 102 ntBASIC0.86□□□□□ -2.27
NKX2-1P43699 SNORA20-201ENST00000384662 132 ntBASIC0.86□□□□□ -2.27
NKX2-1P43699 RNU6-1190P-201ENST00000410811 104 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 163.9 ms