Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.24□□□□□ -2.45
COL18A1P39060 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.24□□□□□ -2.45
COL18A1P39060 RNA5SP275-201ENST00000363936 118 ntBASIC-0.24□□□□□ -2.45
COL18A1P39060 Y_RNA.351-201ENST00000365436 96 ntBASIC-0.24□□□□□ -2.45
COL18A1P39060 RNU6-1040P-201ENST00000383974 107 ntBASIC-0.24□□□□□ -2.45
COL18A1P39060 MTATP6P26-201ENST00000445926 662 ntBASIC-0.24□□□□□ -2.45
COL18A1P39060 Y_RNA.631-201ENST00000459607 101 ntBASIC-0.24□□□□□ -2.45
COL18A1P39060 MTCO2P24-201ENST00000515611 426 ntBASIC-0.24□□□□□ -2.45
COL18A1P39060 RNU6-191P-201ENST00000516295 94 ntBASIC-0.24□□□□□ -2.45
COL18A1P39060 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.24□□□□□ -2.45
COL18A1P39060 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-0.24□□□□□ -2.45
COL18A1P39060 AP001282.2-201ENST00000616149 309 ntBASIC-0.24□□□□□ -2.45
COL18A1P39060 MIR6717-201ENST00000622747 73 ntBASIC-0.24□□□□□ -2.45
COL18A1P39060 MIR342-201ENST00000362212 99 ntBASIC-0.24□□□□□ -2.45
COL18A1P39060 Y_RNA.39-201ENST00000362620 98 ntBASIC-0.24□□□□□ -2.45
COL18A1P39060 Y_RNA.187-201ENST00000363918 113 ntBASIC-0.24□□□□□ -2.45
COL18A1P39060 SNORD24-201ENST00000383884 75 ntBASIC-0.24□□□□□ -2.45
COL18A1P39060 RNU6-535P-201ENST00000384722 107 ntBASIC-0.24□□□□□ -2.45
COL18A1P39060 SNORD116-4-201ENST00000384733 96 ntBASIC-0.24□□□□□ -2.45
COL18A1P39060 MIR215-201ENST00000384858 110 ntBASIC-0.24□□□□□ -2.45
COL18A1P39060 MT-TL1-201ENST00000386347 75 ntBASIC-0.24□□□□□ -2.45
COL18A1P39060 RNU6-763P-201ENST00000390865 106 ntBASIC-0.24□□□□□ -2.45
COL18A1P39060 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-0.24□□□□□ -2.45
COL18A1P39060 RNU7-129P-201ENST00000516128 62 ntBASIC-0.24□□□□□ -2.45
COL18A1P39060 AC138869.1-201ENST00000568623 124 ntBASIC-0.24□□□□□ -2.45
COL18A1P39060 MIR499B-201ENST00000636498 73 ntBASIC-0.24□□□□□ -2.45
COL18A1P39060 RNU6-888P-201ENST00000363010 101 ntBASIC-0.25□□□□□ -2.45
COL18A1P39060 Y_RNA.160-201ENST00000363677 92 ntBASIC-0.25□□□□□ -2.45
COL18A1P39060 RNU6-1189P-201ENST00000383958 107 ntBASIC-0.25□□□□□ -2.45
COL18A1P39060 Y_RNA.463-201ENST00000384271 102 ntBASIC-0.25□□□□□ -2.45
COL18A1P39060 RNU6-269P-201ENST00000391077 97 ntBASIC-0.25□□□□□ -2.45
COL18A1P39060 SNORD75.1-201ENST00000408373 60 ntBASIC-0.25□□□□□ -2.45
COL18A1P39060 MTND1P14-201ENST00000427400 950 ntBASIC-0.25□□□□□ -2.45
COL18A1P39060 SUMO1P3-201ENST00000439961 304 ntBASIC-0.25□□□□□ -2.45
COL18A1P39060 Y_RNA.655-201ENST00000515919 96 ntBASIC-0.25□□□□□ -2.45
COL18A1P39060 SNORD36C-201ENST00000516733 66 ntBASIC-0.25□□□□□ -2.45
COL18A1P39060 AC092447.9-201ENST00000603395 144 ntBASIC-0.25□□□□□ -2.45
COL18A1P39060 AC084782.3-201ENST00000612282 578 ntBASIC-0.25□□□□□ -2.45
COL18A1P39060 AL662814.1-201ENST00000617364 121 ntBASIC-0.25□□□□□ -2.45
COL18A1P39060 AC244669.1-204ENST00000621564 178 ntBASIC-0.25□□□□□ -2.45
COL18A1P39060 Y_RNA.259-201ENST00000364619 101 ntBASIC-0.26□□□□□ -2.45
COL18A1P39060 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.26□□□□□ -2.45
COL18A1P39060 Y_RNA.474-201ENST00000384341 102 ntBASIC-0.26□□□□□ -2.45
COL18A1P39060 MIR587-201ENST00000384845 96 ntBASIC-0.26□□□□□ -2.45
COL18A1P39060 U8.15-201ENST00000390947 134 ntBASIC-0.26□□□□□ -2.45
COL18A1P39060 RNU2-55P-201ENST00000411146 174 ntBASIC-0.26□□□□□ -2.45
COL18A1P39060 RNU7-159P-201ENST00000459284 62 ntBASIC-0.26□□□□□ -2.45
COL18A1P39060 AC010655.3-201ENST00000478818 450 ntBASIC-0.26□□□□□ -2.45
COL18A1P39060 AP003733.2-201ENST00000529409 171 ntBASIC-0.26□□□□□ -2.45
COL18A1P39060 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.26□□□□□ -2.45
COL18A1P39060 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.26□□□□□ -2.45
COL18A1P39060 AL606534.2-204ENST00000635008 178 ntBASIC-0.26□□□□□ -2.45
COL18A1P39060 SNORA18.1-201ENST00000363418 128 ntBASIC-0.27□□□□□ -2.45
COL18A1P39060 Y_RNA.293-201ENST00000364908 93 ntBASIC-0.27□□□□□ -2.45
COL18A1P39060 Y_RNA.384-201ENST00000383909 102 ntBASIC-0.27□□□□□ -2.45
COL18A1P39060 RNU6-187P-201ENST00000384139 106 ntBASIC-0.27□□□□□ -2.45
COL18A1P39060 MIR548A2-201ENST00000384956 97 ntBASIC-0.27□□□□□ -2.45
COL18A1P39060 AC096531.1-201ENST00000419107 107 ntBASIC-0.27□□□□□ -2.45
COL18A1P39060 Y_RNA.637-201ENST00000459424 114 ntBASIC-0.27□□□□□ -2.45
COL18A1P39060 RNU7-80P-201ENST00000459562 61 ntBASIC-0.27□□□□□ -2.45
COL18A1P39060 SNORA20.3-201ENST00000516880 132 ntBASIC-0.27□□□□□ -2.45
COL18A1P39060 RNU2-31P-201ENST00000516954 155 ntBASIC-0.27□□□□□ -2.45
COL18A1P39060 Y_RNA.718-201ENST00000517110 102 ntBASIC-0.27□□□□□ -2.45
COL18A1P39060 C8orf59P2-201ENST00000603441 271 ntBASIC-0.27□□□□□ -2.45
COL18A1P39060 MIR548AZ-201ENST00000616567 95 ntBASIC-0.27□□□□□ -2.45
COL18A1P39060 MIR365A-201ENST00000362260 87 ntBASIC-0.27□□□□□ -2.45
COL18A1P39060 RNU6-653P-201ENST00000363074 106 ntBASIC-0.27□□□□□ -2.45
COL18A1P39060 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.27□□□□□ -2.45
COL18A1P39060 SNORA26.6-201ENST00000391256 115 ntBASIC-0.27□□□□□ -2.45
COL18A1P39060 MRPS35P2-201ENST00000508242 191 ntBASIC-0.27□□□□□ -2.45
COL18A1P39060 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.27□□□□□ -2.45
COL18A1P39060 AC084781.2-201ENST00000615568 161 ntBASIC-0.27□□□□□ -2.45
COL18A1P39060 uc_338.36-201ENST00000622331 158 ntBASIC-0.27□□□□□ -2.45
COL18A1P39060 MIR367-201ENST00000362299 68 ntBASIC-0.28□□□□□ -2.45
COL18A1P39060 SNORD114-12-201ENST00000365400 75 ntBASIC-0.28□□□□□ -2.45
COL18A1P39060 MIR106A-201ENST00000384870 81 ntBASIC-0.28□□□□□ -2.45
COL18A1P39060 AL589823.1-201ENST00000429577 183 ntBASIC-0.28□□□□□ -2.45
COL18A1P39060 AF228730.3-201ENST00000436691 102 ntBASIC-0.28□□□□□ -2.45
COL18A1P39060 FGF7P6-202ENST00000451282 293 ntBASIC-0.28□□□□□ -2.45
COL18A1P39060 RNU7-165P-201ENST00000458864 60 ntBASIC-0.28□□□□□ -2.45
COL18A1P39060 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.28□□□□□ -2.45
COL18A1P39060 RNU1-115P-201ENST00000365329 160 ntBASIC-0.29□□□□□ -2.46
COL18A1P39060 RNU6-949P-201ENST00000384040 107 ntBASIC-0.29□□□□□ -2.46
COL18A1P39060 RNU6-929P-201ENST00000384429 107 ntBASIC-0.29□□□□□ -2.46
COL18A1P39060 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.29□□□□□ -2.46
COL18A1P39060 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.29□□□□□ -2.46
COL18A1P39060 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-0.29□□□□□ -2.46
COL18A1P39060 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.29□□□□□ -2.46
COL18A1P39060 RNU6-1270P-201ENST00000517128 108 ntBASIC-0.29□□□□□ -2.46
COL18A1P39060 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-0.29□□□□□ -2.46
COL18A1P39060 MIR5706-201ENST00000579841 80 ntBASIC-0.29□□□□□ -2.46
COL18A1P39060 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.29□□□□□ -2.46
COL18A1P39060 MTND4LP32-201ENST00000636111 270 ntBASIC-0.29□□□□□ -2.46
COL18A1P39060 SNORD113-8-201ENST00000363497 74 ntBASIC-0.29□□□□□ -2.46
COL18A1P39060 Y_RNA.286-201ENST00000364813 102 ntBASIC-0.29□□□□□ -2.46
COL18A1P39060 Y_RNA.440-201ENST00000384120 114 ntBASIC-0.29□□□□□ -2.46
COL18A1P39060 Y_RNA.569-201ENST00000384749 103 ntBASIC-0.29□□□□□ -2.46
COL18A1P39060 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.29□□□□□ -2.46
COL18A1P39060 RNU6-876P-201ENST00000391295 104 ntBASIC-0.29□□□□□ -2.46
COL18A1P39060 MIR548H2-201ENST00000408874 88 ntBASIC-0.29□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 180.3 ms