Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 RNU6-453P-201ENST00000516819 85 ntBASIC-0.07□□□□□ -2.42
BRCA1P38398 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.07□□□□□ -2.42
BRCA1P38398 MIR30D-201ENST00000362283 70 ntBASIC-0.08□□□□□ -2.42
BRCA1P38398 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.08□□□□□ -2.42
BRCA1P38398 Y_RNA.813-201ENST00000364639 102 ntBASIC-0.08□□□□□ -2.42
BRCA1P38398 Y_RNA.293-201ENST00000364908 93 ntBASIC-0.08□□□□□ -2.42
BRCA1P38398 MIR644A-201ENST00000385262 94 ntBASIC-0.08□□□□□ -2.42
BRCA1P38398 MIR4423-201ENST00000580922 80 ntBASIC-0.08□□□□□ -2.42
BRCA1P38398 AL162376.1-201ENST00000624117 175 ntBASIC-0.08□□□□□ -2.42
BRCA1P38398 MIR101-1-201ENST00000362265 75 ntBASIC-0.09□□□□□ -2.42
BRCA1P38398 Y_RNA.44-201ENST00000362676 108 ntBASIC-0.09□□□□□ -2.42
BRCA1P38398 Y_RNA.154-201ENST00000363624 102 ntBASIC-0.09□□□□□ -2.42
BRCA1P38398 SNORD12C-201ENST00000386307 89 ntBASIC-0.09□□□□□ -2.42
BRCA1P38398 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-0.09□□□□□ -2.42
BRCA1P38398 SNRPGP8-201ENST00000454064 226 ntBASIC-0.09□□□□□ -2.42
BRCA1P38398 SNORD116.3-201ENST00000517176 78 ntBASIC-0.09□□□□□ -2.42
BRCA1P38398 MIR4645-201ENST00000583158 77 ntBASIC-0.09□□□□□ -2.42
BRCA1P38398 DEFB117-201ENST00000602356 141 ntBASIC-0.09□□□□□ -2.42
BRCA1P38398 AL008718.3-201ENST00000610217 321 ntBASIC-0.09□□□□□ -2.42
BRCA1P38398 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-0.09□□□□□ -2.42
BRCA1P38398 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.09□□□□□ -2.42
BRCA1P38398 RNU6-728P-201ENST00000365375 104 ntBASIC-0.1□□□□□ -2.42
BRCA1P38398 RNY3P5-201ENST00000384127 102 ntBASIC-0.1□□□□□ -2.42
BRCA1P38398 RNA5SP237-201ENST00000410414 113 ntBASIC-0.1□□□□□ -2.42
BRCA1P38398 RBMX2P4-201ENST00000441256 376 ntBASIC-0.1□□□□□ -2.42
BRCA1P38398 RNU6-507P-201ENST00000516045 100 ntBASIC-0.1□□□□□ -2.42
BRCA1P38398 RNU6-1338P-201ENST00000516328 91 ntBASIC-0.1□□□□□ -2.42
BRCA1P38398 SNORA27.4-201ENST00000516650 95 ntBASIC-0.1□□□□□ -2.42
BRCA1P38398 AC112487.2-201ENST00000637950 304 ntBASIC-0.1□□□□□ -2.42
BRCA1P38398 UBE2WP1-201ENST00000362030 340 ntBASIC-0.1□□□□□ -2.43
BRCA1P38398 RNU6-702P-201ENST00000364982 107 ntBASIC-0.1□□□□□ -2.43
BRCA1P38398 Y_RNA.526-201ENST00000384572 110 ntBASIC-0.1□□□□□ -2.43
BRCA1P38398 RNU6-121P-201ENST00000410525 99 ntBASIC-0.1□□□□□ -2.43
BRCA1P38398 MTND5P20-201ENST00000448677 143 ntBASIC-0.1□□□□□ -2.43
BRCA1P38398 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-0.1□□□□□ -2.43
BRCA1P38398 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.1□□□□□ -2.43
BRCA1P38398 RNU6-726P-201ENST00000364680 107 ntBASIC-0.11□□□□□ -2.43
BRCA1P38398 RNU6-597P-201ENST00000365620 102 ntBASIC-0.11□□□□□ -2.43
BRCA1P38398 Y_RNA.380-201ENST00000365663 111 ntBASIC-0.11□□□□□ -2.43
BRCA1P38398 MIR145-201ENST00000384967 88 ntBASIC-0.11□□□□□ -2.43
BRCA1P38398 Y_RNA.581-201ENST00000391017 97 ntBASIC-0.11□□□□□ -2.43
BRCA1P38398 RNA5SP261-201ENST00000410536 106 ntBASIC-0.11□□□□□ -2.43
BRCA1P38398 AC096949.1-201ENST00000412047 152 ntBASIC-0.11□□□□□ -2.43
BRCA1P38398 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.11□□□□□ -2.43
BRCA1P38398 RPS29P8-201ENST00000445109 171 ntBASIC-0.11□□□□□ -2.43
BRCA1P38398 MTND4P19-201ENST00000446659 478 ntBASIC-0.11□□□□□ -2.43
BRCA1P38398 RNU7-159P-201ENST00000459284 62 ntBASIC-0.11□□□□□ -2.43
BRCA1P38398 FGF7P4-201ENST00000509595 295 ntBASIC-0.11□□□□□ -2.43
BRCA1P38398 IGLVI-20-201ENST00000519296 130 ntBASIC-0.11□□□□□ -2.43
BRCA1P38398 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.11□□□□□ -2.43
BRCA1P38398 AC037487.3-201ENST00000606668 112 ntBASIC-0.11□□□□□ -2.43
BRCA1P38398 MIR1302-1-201ENST00000637932 143 ntBASIC-0.11□□□□□ -2.43
BRCA1P38398 SNORD114-12-201ENST00000365400 75 ntBASIC-0.12□□□□□ -2.43
BRCA1P38398 SNORD28-201ENST00000384706 75 ntBASIC-0.12□□□□□ -2.43
BRCA1P38398 RNU7-96P-201ENST00000459535 64 ntBASIC-0.12□□□□□ -2.43
BRCA1P38398 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.12□□□□□ -2.43
BRCA1P38398 MIR4639-201ENST00000584938 69 ntBASIC-0.12□□□□□ -2.43
BRCA1P38398 AL133255.1-201ENST00000606374 441 ntBASIC-0.12□□□□□ -2.43
BRCA1P38398 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.12□□□□□ -2.43
BRCA1P38398 Y_RNA.58-201ENST00000362807 102 ntBASIC-0.12□□□□□ -2.43
BRCA1P38398 RNY3P1-201ENST00000365085 102 ntBASIC-0.12□□□□□ -2.43
BRCA1P38398 RNU6-806P-201ENST00000365147 105 ntBASIC-0.12□□□□□ -2.43
BRCA1P38398 MIR214-201ENST00000385214 110 ntBASIC-0.12□□□□□ -2.43
BRCA1P38398 MIR548H2-201ENST00000408874 88 ntBASIC-0.12□□□□□ -2.43
BRCA1P38398 AL138752.1-201ENST00000452964 351 ntBASIC-0.12□□□□□ -2.43
BRCA1P38398 Y_RNA.639-201ENST00000458981 102 ntBASIC-0.12□□□□□ -2.43
BRCA1P38398 SERF1AP1-201ENST00000514575 187 ntBASIC-0.12□□□□□ -2.43
BRCA1P38398 RNU6-1143P-201ENST00000516125 104 ntBASIC-0.12□□□□□ -2.43
BRCA1P38398 RNU6-782P-201ENST00000516852 104 ntBASIC-0.12□□□□□ -2.43
BRCA1P38398 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-0.12□□□□□ -2.43
BRCA1P38398 AC091932.4-201ENST00000623386 200 ntBASIC-0.12□□□□□ -2.43
BRCA1P38398 snoU18.1-201ENST00000629629 71 ntBASIC-0.12□□□□□ -2.43
BRCA1P38398 AC091304.10-201ENST00000641554 121 ntBASIC-0.12□□□□□ -2.43
BRCA1P38398 RNU4-58P-201ENST00000363192 141 ntBASIC-0.13□□□□□ -2.43
BRCA1P38398 Y_RNA.152-201ENST00000363578 100 ntBASIC-0.13□□□□□ -2.43
BRCA1P38398 Y_RNA.286-201ENST00000364813 102 ntBASIC-0.13□□□□□ -2.43
BRCA1P38398 Y_RNA.304-201ENST00000365011 112 ntBASIC-0.13□□□□□ -2.43
BRCA1P38398 MIR588-201ENST00000384900 83 ntBASIC-0.13□□□□□ -2.43
BRCA1P38398 RNU6-823P-201ENST00000391042 103 ntBASIC-0.13□□□□□ -2.43
BRCA1P38398 SNORA79-201ENST00000408376 140 ntBASIC-0.13□□□□□ -2.43
BRCA1P38398 RNU7-80P-201ENST00000459562 61 ntBASIC-0.13□□□□□ -2.43
BRCA1P38398 RNU6-897P-201ENST00000517135 105 ntBASIC-0.13□□□□□ -2.43
BRCA1P38398 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.13□□□□□ -2.43
BRCA1P38398 AC006006.1-201ENST00000603082 144 ntBASIC-0.13□□□□□ -2.43
BRCA1P38398 MIR369-201ENST00000362155 70 ntBASIC-0.14□□□□□ -2.43
BRCA1P38398 SNORD114-5-201ENST00000362928 70 ntBASIC-0.14□□□□□ -2.43
BRCA1P38398 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.14□□□□□ -2.43
BRCA1P38398 RNU6-514P-201ENST00000384208 107 ntBASIC-0.14□□□□□ -2.43
BRCA1P38398 U8.15-201ENST00000390947 134 ntBASIC-0.14□□□□□ -2.43
BRCA1P38398 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-0.14□□□□□ -2.43
BRCA1P38398 AL731563.1-201ENST00000442202 214 ntBASIC-0.14□□□□□ -2.43
BRCA1P38398 RNU6-976P-201ENST00000516086 111 ntBASIC-0.14□□□□□ -2.43
BRCA1P38398 RNU6-191P-201ENST00000516295 94 ntBASIC-0.14□□□□□ -2.43
BRCA1P38398 MIR6082-201ENST00000613604 109 ntBASIC-0.14□□□□□ -2.43
BRCA1P38398 MIR6717-201ENST00000622747 73 ntBASIC-0.14□□□□□ -2.43
BRCA1P38398 Y_RNA.26-201ENST00000362539 101 ntBASIC-0.14□□□□□ -2.43
BRCA1P38398 SNORD114-31-201ENST00000363219 75 ntBASIC-0.14□□□□□ -2.43
BRCA1P38398 Y_RNA.579-201ENST00000390939 94 ntBASIC-0.14□□□□□ -2.43
BRCA1P38398 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.14□□□□□ -2.43
BRCA1P38398 RNU7-53P-201ENST00000516705 60 ntBASIC-0.14□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms