Protein–RNA interactions for Protein: P35711

SOX5, Transcription factor SOX-5, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX5P35711 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
SOX5P35711 RNU6-426P-201ENST00000516464 97 ntBASIC1.54□□□□□ -2.16
SOX5P35711 AL645939.4-201ENST00000604495 135 ntBASIC1.54□□□□□ -2.16
SOX5P35711 MIR6717-201ENST00000622747 73 ntBASIC1.54□□□□□ -2.16
SOX5P35711 AC021613.1-201ENST00000623880 111 ntBASIC1.54□□□□□ -2.16
SOX5P35711 RNU6-690P-201ENST00000365242 106 ntBASIC1.53□□□□□ -2.16
SOX5P35711 SNORD38B-201ENST00000384690 67 ntBASIC1.53□□□□□ -2.16
SOX5P35711 RNU6-1319P-201ENST00000390855 104 ntBASIC1.53□□□□□ -2.16
SOX5P35711 RNU6-747P-201ENST00000390928 104 ntBASIC1.53□□□□□ -2.16
SOX5P35711 RNU6-241P-201ENST00000391148 104 ntBASIC1.53□□□□□ -2.16
SOX5P35711 SNORA26.6-201ENST00000391256 115 ntBASIC1.53□□□□□ -2.16
SOX5P35711 RNU6-177P-201ENST00000411257 104 ntBASIC1.53□□□□□ -2.16
SOX5P35711 RPS3AP1-201ENST00000413190 320 ntBASIC1.53□□□□□ -2.16
SOX5P35711 MRPL35P3-201ENST00000421557 364 ntBASIC1.53□□□□□ -2.16
SOX5P35711 RNU7-21P-201ENST00000459430 62 ntBASIC1.53□□□□□ -2.16
SOX5P35711 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.53□□□□□ -2.16
SOX5P35711 RNA5SP272-201ENST00000516095 111 ntBASIC1.53□□□□□ -2.16
SOX5P35711 RNA5SP61-201ENST00000516453 100 ntBASIC1.53□□□□□ -2.16
SOX5P35711 AP001328.1-201ENST00000528550 176 ntBASIC1.53□□□□□ -2.16
SOX5P35711 AP000753.3-201ENST00000604083 169 ntBASIC1.53□□□□□ -2.16
SOX5P35711 SNORD38B-202ENST00000625943 69 ntBASIC1.53□□□□□ -2.16
SOX5P35711 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.53□□□□□ -2.17
SOX5P35711 AC008163.1-202ENST00000636004 2889 ntBASIC1.53□□□□□ -2.17
SOX5P35711 RNU6-508P-201ENST00000363231 103 ntBASIC1.52□□□□□ -2.17
SOX5P35711 RNU6-309P-201ENST00000364573 106 ntBASIC1.52□□□□□ -2.17
SOX5P35711 SNORA25.8-201ENST00000364831 128 ntBASIC1.52□□□□□ -2.17
SOX5P35711 SNORD12-201ENST00000391002 90 ntBASIC1.52□□□□□ -2.17
SOX5P35711 AL603914.1-201ENST00000401964 204 ntBASIC1.52□□□□□ -2.17
SOX5P35711 RNA5SP95-201ENST00000410319 137 ntBASIC1.52□□□□□ -2.17
SOX5P35711 RNU6-613P-201ENST00000410412 108 ntBASIC1.52□□□□□ -2.17
SOX5P35711 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.52□□□□□ -2.17
SOX5P35711 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.52□□□□□ -2.17
SOX5P35711 MIR8070-201ENST00000616510 88 ntBASIC1.52□□□□□ -2.17
SOX5P35711 RNU6-774P-201ENST00000363238 107 ntBASIC1.51□□□□□ -2.17
SOX5P35711 RNU6-205P-201ENST00000390858 107 ntBASIC1.51□□□□□ -2.17
SOX5P35711 RNU6-955P-201ENST00000410497 104 ntBASIC1.51□□□□□ -2.17
SOX5P35711 RNU6-602P-201ENST00000411155 105 ntBASIC1.51□□□□□ -2.17
SOX5P35711 AP1B1P2-201ENST00000416196 106 ntBASIC1.51□□□□□ -2.17
SOX5P35711 AC063976.4-201ENST00000421971 163 ntBASIC1.51□□□□□ -2.17
SOX5P35711 RNU7-90P-201ENST00000459216 62 ntBASIC1.51□□□□□ -2.17
SOX5P35711 MIR3133-201ENST00000583157 78 ntBASIC1.51□□□□□ -2.17
SOX5P35711 AC011603.4-201ENST00000611325 277 ntBASIC1.51□□□□□ -2.17
SOX5P35711 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
SOX5P35711 RNU6-349P-201ENST00000362402 107 ntBASIC1.5□□□□□ -2.17
SOX5P35711 RNU4-62P-201ENST00000410125 130 ntBASIC1.5□□□□□ -2.17
SOX5P35711 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.5□□□□□ -2.17
SOX5P35711 Y_RNA.651-201ENST00000459380 103 ntBASIC1.5□□□□□ -2.17
SOX5P35711 RNU7-40P-201ENST00000516397 64 ntBASIC1.5□□□□□ -2.17
SOX5P35711 Y_RNA.703-201ENST00000516846 111 ntBASIC1.5□□□□□ -2.17
SOX5P35711 AC023827.1-201ENST00000569247 97 ntBASIC1.5□□□□□ -2.17
SOX5P35711 AL512598.1-201ENST00000610158 273 ntBASIC1.5□□□□□ -2.17
SOX5P35711 AC027335.2-201ENST00000624030 375 ntBASIC1.5□□□□□ -2.17
SOX5P35711 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
SOX5P35711 Y_RNA.354-201ENST00000365448 111 ntBASIC1.49□□□□□ -2.17
SOX5P35711 SNORA2B-201ENST00000384583 137 ntBASIC1.49□□□□□ -2.17
SOX5P35711 MIR518E-201ENST00000385252 88 ntBASIC1.49□□□□□ -2.17
SOX5P35711 MT-TN-201ENST00000387400 73 ntBASIC1.49□□□□□ -2.17
SOX5P35711 RNU6-240P-201ENST00000516098 97 ntBASIC1.49□□□□□ -2.17
SOX5P35711 Y_RNA.692-201ENST00000516627 105 ntBASIC1.49□□□□□ -2.17
SOX5P35711 MIR4264-201ENST00000583520 66 ntBASIC1.49□□□□□ -2.17
SOX5P35711 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
SOX5P35711 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
SOX5P35711 SNORA22.1-201ENST00000362701 134 ntBASIC1.48□□□□□ -2.17
SOX5P35711 Y_RNA.355-201ENST00000365462 98 ntBASIC1.48□□□□□ -2.17
SOX5P35711 AP001340.1-201ENST00000624405 217 ntBASIC1.48□□□□□ -2.17
SOX5P35711 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SOX5P35711 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.47□□□□□ -2.17
SOX5P35711 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
SOX5P35711 AC010332.2-201ENST00000613083 1904 ntBASIC1.47□□□□□ -2.17
SOX5P35711 Y_RNA.430-201ENST00000384081 110 ntBASIC1.47□□□□□ -2.17
SOX5P35711 AC244023.1-201ENST00000426884 112 ntBASIC1.47□□□□□ -2.17
SOX5P35711 AC002429.1-201ENST00000437672 148 ntBASIC1.47□□□□□ -2.17
SOX5P35711 RNU6-113P-201ENST00000516653 101 ntBASIC1.47□□□□□ -2.17
SOX5P35711 AC133485.4-201ENST00000561835 220 ntBASIC1.47□□□□□ -2.17
SOX5P35711 AC138907.4-201ENST00000570107 226 ntBASIC1.47□□□□□ -2.17
SOX5P35711 MIR4303-201ENST00000581299 66 ntBASIC1.47□□□□□ -2.17
SOX5P35711 AC242498.1-201ENST00000604134 111 ntBASIC1.47□□□□□ -2.17
SOX5P35711 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.47□□□□□ -2.17
SOX5P35711 MIR7974-201ENST00000615835 79 ntBASIC1.47□□□□□ -2.17
SOX5P35711 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.47□□□□□ -2.17
SOX5P35711 MIR377-201ENST00000362145 69 ntBASIC1.46□□□□□ -2.18
SOX5P35711 RNU6-746P-201ENST00000384112 109 ntBASIC1.46□□□□□ -2.18
SOX5P35711 Y_RNA.568-201ENST00000384742 113 ntBASIC1.46□□□□□ -2.18
SOX5P35711 RNU6-893P-201ENST00000458841 100 ntBASIC1.46□□□□□ -2.18
SOX5P35711 Y_RNA.757-201ENST00000578934 114 ntBASIC1.46□□□□□ -2.18
SOX5P35711 MIR6841-201ENST00000637129 72 ntBASIC1.46□□□□□ -2.18
SOX5P35711 Y_RNA.116-201ENST00000363292 103 ntBASIC1.45□□□□□ -2.18
SOX5P35711 SNORD113.3-201ENST00000364630 78 ntBASIC1.45□□□□□ -2.18
SOX5P35711 MIR758-201ENST00000390227 88 ntBASIC1.45□□□□□ -2.18
SOX5P35711 MIR548M-201ENST00000408260 86 ntBASIC1.45□□□□□ -2.18
SOX5P35711 RNA5SP144-201ENST00000410846 116 ntBASIC1.45□□□□□ -2.18
SOX5P35711 RNU7-62P-201ENST00000458856 62 ntBASIC1.45□□□□□ -2.18
SOX5P35711 AC036111.3-201ENST00000526389 112 ntBASIC1.45□□□□□ -2.18
SOX5P35711 AC021443.1-201ENST00000604478 211 ntBASIC1.45□□□□□ -2.18
SOX5P35711 U7.2-201ENST00000607576 63 ntBASIC1.45□□□□□ -2.18
SOX5P35711 Y_RNA.168-201ENST00000363740 102 ntBASIC1.44□□□□□ -2.18
SOX5P35711 SNORD12C-201ENST00000386307 89 ntBASIC1.44□□□□□ -2.18
SOX5P35711 AL022718.1-201ENST00000412004 84 ntBASIC1.44□□□□□ -2.18
SOX5P35711 POLR2J4-204ENST00000418424 324 ntBASIC1.44□□□□□ -2.18
SOX5P35711 AC068338.1-201ENST00000565567 176 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 175.1 ms