Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 MIR6755-201ENST00000619993 66 ntBASIC0.24□□□□□ -2.37
SCN4AP35499 RNU6-797P-201ENST00000363101 109 ntBASIC0.24□□□□□ -2.37
SCN4AP35499 Y_RNA.217-201ENST00000364214 105 ntBASIC0.24□□□□□ -2.37
SCN4AP35499 RNU6-450P-201ENST00000364654 107 ntBASIC0.24□□□□□ -2.37
SCN4AP35499 SNORA51.10-201ENST00000384418 136 ntBASIC0.24□□□□□ -2.37
SCN4AP35499 MIR802-201ENST00000390235 94 ntBASIC0.24□□□□□ -2.37
SCN4AP35499 AL022718.1-201ENST00000412004 84 ntBASIC0.24□□□□□ -2.37
SCN4AP35499 RNU7-62P-201ENST00000458856 62 ntBASIC0.24□□□□□ -2.37
SCN4AP35499 Y_RNA.641-201ENST00000459414 105 ntBASIC0.24□□□□□ -2.37
SCN4AP35499 AL117351.2-201ENST00000513571 157 ntBASIC0.24□□□□□ -2.37
SCN4AP35499 RNU6-635P-201ENST00000516651 102 ntBASIC0.24□□□□□ -2.37
SCN4AP35499 RNU7-156P-201ENST00000517214 74 ntBASIC0.24□□□□□ -2.37
SCN4AP35499 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
SCN4AP35499 Y_RNA.19-201ENST00000362462 99 ntBASIC0.23□□□□□ -2.37
SCN4AP35499 SNORD45.3-201ENST00000363836 72 ntBASIC0.23□□□□□ -2.37
SCN4AP35499 Y_RNA.275-201ENST00000364726 110 ntBASIC0.23□□□□□ -2.37
SCN4AP35499 RNU4-45P-201ENST00000365469 141 ntBASIC0.23□□□□□ -2.37
SCN4AP35499 RNU6-949P-201ENST00000384040 107 ntBASIC0.23□□□□□ -2.37
SCN4AP35499 MIR140-201ENST00000385282 100 ntBASIC0.23□□□□□ -2.37
SCN4AP35499 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
SCN4AP35499 AL606845.1-201ENST00000404881 255 ntBASIC0.23□□□□□ -2.37
SCN4AP35499 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.23□□□□□ -2.37
SCN4AP35499 AC022523.2-201ENST00000561045 150 ntBASIC0.23□□□□□ -2.37
SCN4AP35499 AP001282.2-201ENST00000616149 309 ntBASIC0.23□□□□□ -2.37
SCN4AP35499 RNU6-1309P-201ENST00000363305 108 ntBASIC0.22□□□□□ -2.37
SCN4AP35499 RNU4-70P-201ENST00000384579 139 ntBASIC0.22□□□□□ -2.37
SCN4AP35499 RNU6-447P-201ENST00000410293 104 ntBASIC0.22□□□□□ -2.37
SCN4AP35499 RNU6-1118P-201ENST00000410382 104 ntBASIC0.22□□□□□ -2.37
SCN4AP35499 RNU6-1076P-201ENST00000410397 104 ntBASIC0.22□□□□□ -2.37
SCN4AP35499 RNU6-355P-201ENST00000410427 104 ntBASIC0.22□□□□□ -2.37
SCN4AP35499 RNU6-791P-201ENST00000410467 104 ntBASIC0.22□□□□□ -2.37
SCN4AP35499 RNU6-705P-201ENST00000410601 104 ntBASIC0.22□□□□□ -2.37
SCN4AP35499 RNU6-1100P-201ENST00000410691 104 ntBASIC0.22□□□□□ -2.37
SCN4AP35499 RNU6-860P-201ENST00000410860 104 ntBASIC0.22□□□□□ -2.37
SCN4AP35499 RNU6-1217P-201ENST00000411276 104 ntBASIC0.22□□□□□ -2.37
SCN4AP35499 RNU6-785P-201ENST00000411324 104 ntBASIC0.22□□□□□ -2.37
SCN4AP35499 MTATP6P23-201ENST00000440153 476 ntBASIC0.22□□□□□ -2.37
SCN4AP35499 MIR4802-201ENST00000581881 80 ntBASIC0.22□□□□□ -2.37
SCN4AP35499 DEFB117-201ENST00000602356 141 ntBASIC0.22□□□□□ -2.37
SCN4AP35499 uc_338.6-201ENST00000613544 171 ntBASIC0.22□□□□□ -2.37
SCN4AP35499 U6.90-201ENST00000614007 104 ntBASIC0.22□□□□□ -2.37
SCN4AP35499 Y_RNA.802-201ENST00000614892 130 ntBASIC0.22□□□□□ -2.37
SCN4AP35499 AL662814.1-201ENST00000617364 121 ntBASIC0.22□□□□□ -2.37
SCN4AP35499 U6.70-201ENST00000620287 104 ntBASIC0.22□□□□□ -2.37
SCN4AP35499 SNORD44.1-201ENST00000363202 61 ntBASIC0.22□□□□□ -2.37
SCN4AP35499 MIR563-201ENST00000385080 79 ntBASIC0.22□□□□□ -2.37
SCN4AP35499 RNU6-679P-201ENST00000391003 106 ntBASIC0.22□□□□□ -2.37
SCN4AP35499 SNORD83.1-201ENST00000411362 77 ntBASIC0.22□□□□□ -2.37
SCN4AP35499 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.22□□□□□ -2.37
SCN4AP35499 MIR4680-201ENST00000580906 66 ntBASIC0.22□□□□□ -2.37
SCN4AP35499 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
SCN4AP35499 Y_RNA.304-201ENST00000365011 112 ntBASIC0.21□□□□□ -2.38
SCN4AP35499 Y_RNA.432-201ENST00000384087 111 ntBASIC0.21□□□□□ -2.38
SCN4AP35499 SNORA1-201ENST00000384107 130 ntBASIC0.21□□□□□ -2.38
SCN4AP35499 RNU6-662P-201ENST00000384253 104 ntBASIC0.21□□□□□ -2.38
SCN4AP35499 MIR526A2-201ENST00000390198 65 ntBASIC0.21□□□□□ -2.38
SCN4AP35499 RNU6-1228P-201ENST00000391014 107 ntBASIC0.21□□□□□ -2.38
SCN4AP35499 SNORD100-201ENST00000408573 76 ntBASIC0.21□□□□□ -2.38
SCN4AP35499 RNU6-1203P-201ENST00000410703 110 ntBASIC0.21□□□□□ -2.38
SCN4AP35499 SNORD2.1-201ENST00000458762 69 ntBASIC0.21□□□□□ -2.38
SCN4AP35499 AP001094.1-201ENST00000579805 193 ntBASIC0.21□□□□□ -2.38
SCN4AP35499 MIR4744-201ENST00000581563 82 ntBASIC0.21□□□□□ -2.38
SCN4AP35499 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.21□□□□□ -2.38
SCN4AP35499 RNU6-211P-201ENST00000384047 107 ntBASIC0.2□□□□□ -2.38
SCN4AP35499 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.2□□□□□ -2.38
SCN4AP35499 MIR548I3-201ENST00000408378 149 ntBASIC0.2□□□□□ -2.38
SCN4AP35499 SNORD93-201ENST00000408813 74 ntBASIC0.2□□□□□ -2.38
SCN4AP35499 RNU6-938P-201ENST00000411285 103 ntBASIC0.2□□□□□ -2.38
SCN4AP35499 RNU7-80P-201ENST00000459562 61 ntBASIC0.2□□□□□ -2.38
SCN4AP35499 RNA5SP153-201ENST00000516498 76 ntBASIC0.2□□□□□ -2.38
SCN4AP35499 AL365205.2-201ENST00000594586 68 ntBASIC0.2□□□□□ -2.38
SCN4AP35499 Y_RNA.804-201ENST00000615262 101 ntBASIC0.2□□□□□ -2.38
SCN4AP35499 SNORD118-201ENST00000363593 134 ntBASIC0.2□□□□□ -2.38
SCN4AP35499 SNORA63C-201ENST00000364578 129 ntBASIC0.2□□□□□ -2.38
SCN4AP35499 Y_RNA.292-201ENST00000364904 97 ntBASIC0.2□□□□□ -2.38
SCN4AP35499 RNU6-945P-201ENST00000383947 107 ntBASIC0.2□□□□□ -2.38
SCN4AP35499 Y_RNA.509-201ENST00000384506 99 ntBASIC0.2□□□□□ -2.38
SCN4AP35499 RNU6-738P-201ENST00000384531 106 ntBASIC0.2□□□□□ -2.38
SCN4AP35499 MIR938-201ENST00000401216 83 ntBASIC0.2□□□□□ -2.38
SCN4AP35499 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.2□□□□□ -2.38
SCN4AP35499 AC091959.1-201ENST00000495857 238 ntBASIC0.2□□□□□ -2.38
SCN4AP35499 MIR4643-201ENST00000577473 78 ntBASIC0.2□□□□□ -2.38
SCN4AP35499 AC097639.2-201ENST00000603159 172 ntBASIC0.2□□□□□ -2.38
SCN4AP35499 Y_RNA.42-201ENST00000362660 108 ntBASIC0.19□□□□□ -2.38
SCN4AP35499 RNU6-888P-201ENST00000363010 101 ntBASIC0.19□□□□□ -2.38
SCN4AP35499 Y_RNA.153-201ENST00000363615 91 ntBASIC0.19□□□□□ -2.38
SCN4AP35499 RNA5SP117-201ENST00000365294 118 ntBASIC0.19□□□□□ -2.38
SCN4AP35499 Y_RNA.394-201ENST00000383942 103 ntBASIC0.19□□□□□ -2.38
SCN4AP35499 RNU6-472P-201ENST00000384299 107 ntBASIC0.19□□□□□ -2.38
SCN4AP35499 RNU6-535P-201ENST00000384722 107 ntBASIC0.19□□□□□ -2.38
SCN4AP35499 RNA5SP261-201ENST00000410536 106 ntBASIC0.19□□□□□ -2.38
SCN4AP35499 MTND4LP11-201ENST00000422184 280 ntBASIC0.19□□□□□ -2.38
SCN4AP35499 AC044792.1-201ENST00000593294 196 ntBASIC0.19□□□□□ -2.38
SCN4AP35499 AC008608.1-201ENST00000603910 127 ntBASIC0.19□□□□□ -2.38
SCN4AP35499 AC091932.4-201ENST00000623386 200 ntBASIC0.19□□□□□ -2.38
SCN4AP35499 Y_RNA.24-201ENST00000362508 103 ntBASIC0.18□□□□□ -2.38
SCN4AP35499 Y_RNA.572-201ENST00000384757 98 ntBASIC0.18□□□□□ -2.38
SCN4AP35499 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.18□□□□□ -2.38
SCN4AP35499 AL512326.2-201ENST00000426359 151 ntBASIC0.18□□□□□ -2.38
SCN4AP35499 RNU6-893P-201ENST00000458841 100 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 981.6 ms