Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 RNA5SP120-201ENST00000410900 112 ntBASIC4.18□□□□□ -1.74
HOXD11P31277 AC025033.1-201ENST00000463883 194 ntBASIC4.18□□□□□ -1.74
HOXD11P31277 RPS26P15-201ENST00000488067 348 ntBASIC4.18□□□□□ -1.74
HOXD11P31277 RN7SL323P-201ENST00000494712 295 ntBASIC4.18□□□□□ -1.74
HOXD11P31277 MIR8058-201ENST00000615737 89 ntBASIC4.18□□□□□ -1.74
HOXD11P31277 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.18□□□□□ -1.74
HOXD11P31277 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HOXD11P31277 SNORA80A-201ENST00000363922 136 ntBASIC4.17□□□□□ -1.74
HOXD11P31277 MIR513A1-201ENST00000385138 129 ntBASIC4.17□□□□□ -1.74
HOXD11P31277 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HOXD11P31277 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXD11P31277 Y_RNA.330-201ENST00000365230 109 ntBASIC4.16□□□□□ -1.74
HOXD11P31277 MIR548F3-201ENST00000408509 87 ntBASIC4.16□□□□□ -1.74
HOXD11P31277 SNORA31.17-201ENST00000516953 127 ntBASIC4.16□□□□□ -1.74
HOXD11P31277 MIR4276-201ENST00000584832 70 ntBASIC4.16□□□□□ -1.74
HOXD11P31277 MIR6891-201ENST00000618788 93 ntBASIC4.16□□□□□ -1.74
HOXD11P31277 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
HOXD11P31277 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
HOXD11P31277 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HOXD11P31277 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HOXD11P31277 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
HOXD11P31277 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
HOXD11P31277 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC4.15□□□□□ -1.74
HOXD11P31277 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
HOXD11P31277 MIR103A2-201ENST00000362154 78 ntBASIC4.15□□□□□ -1.75
HOXD11P31277 MIR4524B-201ENST00000581569 115 ntBASIC4.15□□□□□ -1.75
HOXD11P31277 MIR4325-201ENST00000583049 90 ntBASIC4.15□□□□□ -1.75
HOXD11P31277 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.15□□□□□ -1.75
HOXD11P31277 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HOXD11P31277 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HOXD11P31277 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HOXD11P31277 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HOXD11P31277 RNA5SP245-201ENST00000364239 121 ntBASIC4.14□□□□□ -1.75
HOXD11P31277 MIR194-1-201ENST00000384892 85 ntBASIC4.14□□□□□ -1.75
HOXD11P31277 MIR517B-201ENST00000385102 67 ntBASIC4.14□□□□□ -1.75
HOXD11P31277 AL035423.1-201ENST00000420331 213 ntBASIC4.14□□□□□ -1.75
HOXD11P31277 UBBP3-201ENST00000445497 241 ntBASIC4.14□□□□□ -1.75
HOXD11P31277 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.14□□□□□ -1.75
HOXD11P31277 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.14□□□□□ -1.75
HOXD11P31277 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HOXD11P31277 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HOXD11P31277 RNU6-54P-201ENST00000365563 107 ntBASIC4.13□□□□□ -1.75
HOXD11P31277 MIR921-201ENST00000401133 56 ntBASIC4.13□□□□□ -1.75
HOXD11P31277 RNA5SP100-201ENST00000410903 110 ntBASIC4.13□□□□□ -1.75
HOXD11P31277 RNA5SP59-201ENST00000410922 110 ntBASIC4.13□□□□□ -1.75
HOXD11P31277 AL133373.1-201ENST00000497098 94 ntBASIC4.13□□□□□ -1.75
HOXD11P31277 5S_rRNA.3-201ENST00000517021 110 ntBASIC4.13□□□□□ -1.75
HOXD11P31277 5S_rRNA.19-201ENST00000612131 110 ntBASIC4.13□□□□□ -1.75
HOXD11P31277 5S_rRNA.18-201ENST00000621941 110 ntBASIC4.13□□□□□ -1.75
HOXD11P31277 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.13□□□□□ -1.75
HOXD11P31277 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXD11P31277 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
HOXD11P31277 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
HOXD11P31277 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXD11P31277 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC4.13□□□□□ -1.75
HOXD11P31277 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HOXD11P31277 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
HOXD11P31277 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HOXD11P31277 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HOXD11P31277 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.12□□□□□ -1.75
HOXD11P31277 MIR423-201ENST00000362201 94 ntBASIC4.12□□□□□ -1.75
HOXD11P31277 RNU6-1162P-201ENST00000384443 104 ntBASIC4.12□□□□□ -1.75
HOXD11P31277 RNA5SP246-201ENST00000458909 119 ntBASIC4.12□□□□□ -1.75
HOXD11P31277 AL360157.1-201ENST00000565962 87 ntBASIC4.12□□□□□ -1.75
HOXD11P31277 MIR548O2-201ENST00000616090 70 ntBASIC4.12□□□□□ -1.75
HOXD11P31277 MIR7843-201ENST00000622274 79 ntBASIC4.12□□□□□ -1.75
HOXD11P31277 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
HOXD11P31277 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC4.12□□□□□ -1.75
HOXD11P31277 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.12□□□□□ -1.75
HOXD11P31277 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXD11P31277 RNU6ATAC29P-201ENST00000408088 125 ntBASIC4.11□□□□□ -1.75
HOXD11P31277 MIR1185-1-201ENST00000408598 86 ntBASIC4.11□□□□□ -1.75
HOXD11P31277 AL159169.1-201ENST00000421119 127 ntBASIC4.11□□□□□ -1.75
HOXD11P31277 AC087499.8-201ENST00000578406 226 ntBASIC4.11□□□□□ -1.75
HOXD11P31277 GHRLOS.1-201ENST00000610995 70 ntBASIC4.11□□□□□ -1.75
HOXD11P31277 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXD11P31277 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXD11P31277 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HOXD11P31277 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXD11P31277 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HOXD11P31277 RNU6-1126P-201ENST00000384002 107 ntBASIC4.1□□□□□ -1.75
HOXD11P31277 MIR545-201ENST00000385085 106 ntBASIC4.1□□□□□ -1.75
HOXD11P31277 RNU6ATAC6P-201ENST00000408132 126 ntBASIC4.1□□□□□ -1.75
HOXD11P31277 MIR1251-201ENST00000408552 70 ntBASIC4.1□□□□□ -1.75
HOXD11P31277 AC244505.6-201ENST00000452829 130 ntBASIC4.1□□□□□ -1.75
HOXD11P31277 AL157398.1-201ENST00000452981 186 ntBASIC4.1□□□□□ -1.75
HOXD11P31277 AC008608.1-201ENST00000603910 127 ntBASIC4.1□□□□□ -1.75
HOXD11P31277 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HOXD11P31277 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HOXD11P31277 RNU6-698P-201ENST00000363523 107 ntBASIC4.09□□□□□ -1.75
HOXD11P31277 RNU6-34P-201ENST00000364874 107 ntBASIC4.09□□□□□ -1.75
HOXD11P31277 MIR490-201ENST00000384865 128 ntBASIC4.09□□□□□ -1.75
HOXD11P31277 SNORA48.8-201ENST00000391324 134 ntBASIC4.09□□□□□ -1.75
HOXD11P31277 AC005326.1-201ENST00000429197 123 ntBASIC4.09□□□□□ -1.75
HOXD11P31277 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.09□□□□□ -1.75
HOXD11P31277 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.09□□□□□ -1.76
HOXD11P31277 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
HOXD11P31277 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
HOXD11P31277 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
HOXD11P31277 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms