Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 Y_RNA.242-201ENST00000364473 110 ntBASIC1.96□□□□□ -2.1
CTGFP29279 SNORA2.2-201ENST00000365473 135 ntBASIC1.96□□□□□ -2.1
CTGFP29279 RNY1P4-201ENST00000384595 115 ntBASIC1.96□□□□□ -2.1
CTGFP29279 SNORA26-201ENST00000391286 122 ntBASIC1.96□□□□□ -2.1
CTGFP29279 RNU6-938P-201ENST00000411285 103 ntBASIC1.96□□□□□ -2.1
CTGFP29279 AC004941.2-201ENST00000427009 228 ntBASIC1.96□□□□□ -2.1
CTGFP29279 FTH1P12-201ENST00000432137 551 ntBASIC1.96□□□□□ -2.1
CTGFP29279 MIR1270-201ENST00000459320 83 ntBASIC1.96□□□□□ -2.1
CTGFP29279 RNU2-19P-201ENST00000517288 84 ntBASIC1.96□□□□□ -2.1
CTGFP29279 AC078899.2-201ENST00000595282 212 ntBASIC1.96□□□□□ -2.1
CTGFP29279 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.96□□□□□ -2.1
CTGFP29279 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CTGFP29279 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
CTGFP29279 RNU6-112P-201ENST00000363599 104 ntBASIC1.95□□□□□ -2.1
CTGFP29279 MIR144-201ENST00000384886 86 ntBASIC1.95□□□□□ -2.1
CTGFP29279 AL451046.2-201ENST00000403074 277 ntBASIC1.95□□□□□ -2.1
CTGFP29279 RN7SKP200-201ENST00000410564 320 ntBASIC1.95□□□□□ -2.1
CTGFP29279 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.95□□□□□ -2.1
CTGFP29279 AL512326.2-201ENST00000426359 151 ntBASIC1.95□□□□□ -2.1
CTGFP29279 STAG3L5P-204ENST00000443759 179 ntBASIC1.95□□□□□ -2.1
CTGFP29279 RNU7-171P-201ENST00000459581 62 ntBASIC1.95□□□□□ -2.1
CTGFP29279 AC079804.2-201ENST00000490376 200 ntBASIC1.95□□□□□ -2.1
CTGFP29279 SNORA31.10-201ENST00000516482 106 ntBASIC1.95□□□□□ -2.1
CTGFP29279 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.95□□□□□ -2.1
CTGFP29279 AC006160.2-201ENST00000637708 154 ntBASIC1.95□□□□□ -2.1
CTGFP29279 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.95□□□□□ -2.1
CTGFP29279 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.95□□□□□ -2.1
CTGFP29279 AC005336.3-201ENST00000623833 2679 ntBASIC1.94□□□□□ -2.1
CTGFP29279 Y_RNA.94-201ENST00000363068 106 ntBASIC1.94□□□□□ -2.1
CTGFP29279 RNU1-42P-201ENST00000364033 160 ntBASIC1.94□□□□□ -2.1
CTGFP29279 Y_RNA.360-201ENST00000365512 102 ntBASIC1.94□□□□□ -2.1
CTGFP29279 SNORD24-201ENST00000383884 75 ntBASIC1.94□□□□□ -2.1
CTGFP29279 RNU6-296P-201ENST00000384608 107 ntBASIC1.94□□□□□ -2.1
CTGFP29279 RNU6-679P-201ENST00000391003 106 ntBASIC1.94□□□□□ -2.1
CTGFP29279 SNORD23.1-201ENST00000408212 104 ntBASIC1.94□□□□□ -2.1
CTGFP29279 MIR548O-201ENST00000408583 114 ntBASIC1.94□□□□□ -2.1
CTGFP29279 Y_RNA.601-201ENST00000410500 113 ntBASIC1.94□□□□□ -2.1
CTGFP29279 Y_RNA.611-201ENST00000410682 108 ntBASIC1.94□□□□□ -2.1
CTGFP29279 RNU2-7P-201ENST00000410794 178 ntBASIC1.94□□□□□ -2.1
CTGFP29279 Y_RNA.620-201ENST00000411009 88 ntBASIC1.94□□□□□ -2.1
CTGFP29279 MRPL35P3-201ENST00000421557 364 ntBASIC1.94□□□□□ -2.1
CTGFP29279 HSPE1P9-201ENST00000440046 311 ntBASIC1.94□□□□□ -2.1
CTGFP29279 SNRPGP13-201ENST00000442212 177 ntBASIC1.94□□□□□ -2.1
CTGFP29279 AC055731.1-201ENST00000474387 401 ntBASIC1.94□□□□□ -2.1
CTGFP29279 RNU6-1018P-201ENST00000516577 106 ntBASIC1.94□□□□□ -2.1
CTGFP29279 RNA5SP437-201ENST00000517249 129 ntBASIC1.94□□□□□ -2.1
CTGFP29279 MIR4305-201ENST00000583252 102 ntBASIC1.94□□□□□ -2.1
CTGFP29279 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.94□□□□□ -2.1
CTGFP29279 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.94□□□□□ -2.1
CTGFP29279 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
CTGFP29279 MIR342-201ENST00000362212 99 ntBASIC1.93□□□□□ -2.1
CTGFP29279 RNU6-832P-201ENST00000363319 107 ntBASIC1.93□□□□□ -2.1
CTGFP29279 RNU4-36P-201ENST00000364294 144 ntBASIC1.93□□□□□ -2.1
CTGFP29279 SNORA16.1-201ENST00000364597 132 ntBASIC1.93□□□□□ -2.1
CTGFP29279 RNU6-60P-201ENST00000364792 103 ntBASIC1.93□□□□□ -2.1
CTGFP29279 RNY1P6-201ENST00000384193 109 ntBASIC1.93□□□□□ -2.1
CTGFP29279 Y_RNA.494-201ENST00000384432 111 ntBASIC1.93□□□□□ -2.1
CTGFP29279 RNU6-24P-201ENST00000384440 107 ntBASIC1.93□□□□□ -2.1
CTGFP29279 SNORA7.5-201ENST00000410672 110 ntBASIC1.93□□□□□ -2.1
CTGFP29279 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.93□□□□□ -2.1
CTGFP29279 SNX2P2-201ENST00000424553 323 ntBASIC1.93□□□□□ -2.1
CTGFP29279 RNU7-45P-201ENST00000459460 63 ntBASIC1.93□□□□□ -2.1
CTGFP29279 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.93□□□□□ -2.1
CTGFP29279 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.93□□□□□ -2.1
CTGFP29279 RNA5SP481-201ENST00000516814 122 ntBASIC1.93□□□□□ -2.1
CTGFP29279 MIR4668-201ENST00000582284 70 ntBASIC1.93□□□□□ -2.1
CTGFP29279 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.92□□□□□ -2.1
CTGFP29279 Y_RNA.10-201ENST00000362371 110 ntBASIC1.92□□□□□ -2.1
CTGFP29279 Y_RNA.155-201ENST00000363632 101 ntBASIC1.92□□□□□ -2.1
CTGFP29279 SNORD115-27-201ENST00000364430 82 ntBASIC1.92□□□□□ -2.1
CTGFP29279 Y_RNA.247-201ENST00000364500 92 ntBASIC1.92□□□□□ -2.1
CTGFP29279 Y_RNA.565-201ENST00000384719 101 ntBASIC1.92□□□□□ -2.1
CTGFP29279 MIR7-2-201ENST00000384970 110 ntBASIC1.92□□□□□ -2.1
CTGFP29279 AL034345.1-201ENST00000407768 123 ntBASIC1.92□□□□□ -2.1
CTGFP29279 RNU6-1258P-201ENST00000516911 111 ntBASIC1.92□□□□□ -2.1
CTGFP29279 MIR3163-201ENST00000581592 73 ntBASIC1.92□□□□□ -2.1
CTGFP29279 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.92□□□□□ -2.1
CTGFP29279 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.92□□□□□ -2.1
CTGFP29279 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
CTGFP29279 Y_RNA.37-201ENST00000362606 108 ntBASIC1.91□□□□□ -2.1
CTGFP29279 snoU2-30.1-201ENST00000365012 70 ntBASIC1.91□□□□□ -2.1
CTGFP29279 Y_RNA.440-201ENST00000384120 114 ntBASIC1.91□□□□□ -2.1
CTGFP29279 Y_RNA.547-201ENST00000384654 119 ntBASIC1.91□□□□□ -2.1
CTGFP29279 MIR759-201ENST00000390224 91 ntBASIC1.91□□□□□ -2.1
CTGFP29279 MIR802-201ENST00000390235 94 ntBASIC1.91□□□□□ -2.1
CTGFP29279 RNU6-788P-201ENST00000390967 104 ntBASIC1.91□□□□□ -2.1
CTGFP29279 RNA5SP100-201ENST00000410903 110 ntBASIC1.91□□□□□ -2.1
CTGFP29279 RNA5SP59-201ENST00000410922 110 ntBASIC1.91□□□□□ -2.1
CTGFP29279 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.91□□□□□ -2.1
CTGFP29279 RNU6-717P-201ENST00000459076 104 ntBASIC1.91□□□□□ -2.1
CTGFP29279 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.91□□□□□ -2.1
CTGFP29279 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.91□□□□□ -2.1
CTGFP29279 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.91□□□□□ -2.1
CTGFP29279 AC091932.4-201ENST00000623386 200 ntBASIC1.91□□□□□ -2.1
CTGFP29279 MIR548BB-201ENST00000626714 66 ntBASIC1.91□□□□□ -2.1
CTGFP29279 MIR203B-201ENST00000636080 86 ntBASIC1.91□□□□□ -2.1
CTGFP29279 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CTGFP29279 SNORD14E-201ENST00000364009 85 ntBASIC1.9□□□□□ -2.11
CTGFP29279 RNU6-1229P-201ENST00000364295 107 ntBASIC1.9□□□□□ -2.11
CTGFP29279 SNORD116-22-201ENST00000384430 92 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 157 ms