Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 RNU4-52P-201ENST00000384209 138 ntBASIC1.65□□□□□ -2.15
CD40P25942 SNORA40.18-201ENST00000391200 128 ntBASIC1.65□□□□□ -2.15
CD40P25942 COX6CP6-201ENST00000490840 228 ntBASIC1.65□□□□□ -2.15
CD40P25942 RNU6-548P-201ENST00000517083 115 ntBASIC1.65□□□□□ -2.15
CD40P25942 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.65□□□□□ -2.15
CD40P25942 PRELID3BP2-201ENST00000605362 201 ntBASIC1.65□□□□□ -2.15
CD40P25942 MIR6845-201ENST00000613182 61 ntBASIC1.65□□□□□ -2.15
CD40P25942 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.64□□□□□ -2.15
CD40P25942 RNA5SP264-201ENST00000363115 107 ntBASIC1.64□□□□□ -2.15
CD40P25942 Y_RNA.353-201ENST00000365440 108 ntBASIC1.64□□□□□ -2.15
CD40P25942 SNORD38B-201ENST00000384690 67 ntBASIC1.64□□□□□ -2.15
CD40P25942 RNU6-1104P-201ENST00000384723 104 ntBASIC1.64□□□□□ -2.15
CD40P25942 RNU6-735P-201ENST00000410612 107 ntBASIC1.64□□□□□ -2.15
CD40P25942 RNU6-717P-201ENST00000459076 104 ntBASIC1.64□□□□□ -2.15
CD40P25942 AC048334.1-201ENST00000477975 159 ntBASIC1.64□□□□□ -2.15
CD40P25942 MTND5P34-201ENST00000568888 325 ntBASIC1.64□□□□□ -2.15
CD40P25942 SNORD38B-202ENST00000625943 69 ntBASIC1.64□□□□□ -2.15
CD40P25942 AP000553.5-201ENST00000641933 54 ntBASIC1.64□□□□□ -2.15
CD40P25942 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CD40P25942 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CD40P25942 RNA5SP432-201ENST00000362480 116 ntBASIC1.63□□□□□ -2.15
CD40P25942 Y_RNA.198-201ENST00000364013 98 ntBASIC1.63□□□□□ -2.15
CD40P25942 Y_RNA.354-201ENST00000365448 111 ntBASIC1.63□□□□□ -2.15
CD40P25942 Y_RNA.531-201ENST00000384589 121 ntBASIC1.63□□□□□ -2.15
CD40P25942 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.63□□□□□ -2.15
CD40P25942 MIR1185-1-201ENST00000408598 86 ntBASIC1.63□□□□□ -2.15
CD40P25942 AP003716.2-201ENST00000528260 108 ntBASIC1.63□□□□□ -2.15
CD40P25942 MIR4769-201ENST00000584126 77 ntBASIC1.63□□□□□ -2.15
CD40P25942 MIR8065-201ENST00000620577 100 ntBASIC1.63□□□□□ -2.15
CD40P25942 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CD40P25942 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.62□□□□□ -2.15
CD40P25942 Y_RNA.213-201ENST00000364178 111 ntBASIC1.62□□□□□ -2.15
CD40P25942 RNU6-396P-201ENST00000365369 105 ntBASIC1.62□□□□□ -2.15
CD40P25942 Y_RNA.470-201ENST00000384307 117 ntBASIC1.62□□□□□ -2.15
CD40P25942 MIR548A3-201ENST00000385297 97 ntBASIC1.62□□□□□ -2.15
CD40P25942 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
CD40P25942 Y_RNA.649-201ENST00000459077 103 ntBASIC1.62□□□□□ -2.15
CD40P25942 AC113410.1-201ENST00000505029 247 ntBASIC1.62□□□□□ -2.15
CD40P25942 RNU6-237P-201ENST00000515985 71 ntBASIC1.62□□□□□ -2.15
CD40P25942 SNORA31.2-201ENST00000516019 134 ntBASIC1.62□□□□□ -2.15
CD40P25942 RNA5SP33-201ENST00000516687 98 ntBASIC1.62□□□□□ -2.15
CD40P25942 AL670379.3-201ENST00000605040 251 ntBASIC1.62□□□□□ -2.15
CD40P25942 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.62□□□□□ -2.15
CD40P25942 RNA5SP138-201ENST00000365098 114 ntBASIC1.61□□□□□ -2.15
CD40P25942 MT-TI-201ENST00000387365 69 ntBASIC1.61□□□□□ -2.15
CD40P25942 MIR759-201ENST00000390224 91 ntBASIC1.61□□□□□ -2.15
CD40P25942 RNU6-1064P-201ENST00000410626 104 ntBASIC1.61□□□□□ -2.15
CD40P25942 Y_RNA.629-201ENST00000411368 105 ntBASIC1.61□□□□□ -2.15
CD40P25942 AC003989.2-201ENST00000440224 169 ntBASIC1.61□□□□□ -2.15
CD40P25942 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.61□□□□□ -2.15
CD40P25942 RN7SL274P-201ENST00000492268 272 ntBASIC1.61□□□□□ -2.15
CD40P25942 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.61□□□□□ -2.15
CD40P25942 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.61□□□□□ -2.15
CD40P25942 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.6□□□□□ -2.15
CD40P25942 Y_RNA.273-201ENST00000364703 102 ntBASIC1.6□□□□□ -2.15
CD40P25942 RNU6-1056P-201ENST00000383996 107 ntBASIC1.6□□□□□ -2.15
CD40P25942 RNU6-476P-201ENST00000384726 107 ntBASIC1.6□□□□□ -2.15
CD40P25942 MIR548A1-201ENST00000385041 97 ntBASIC1.6□□□□□ -2.15
CD40P25942 SNORD12C-201ENST00000386307 89 ntBASIC1.6□□□□□ -2.15
CD40P25942 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.6□□□□□ -2.15
CD40P25942 RNA5SP338-201ENST00000410495 85 ntBASIC1.6□□□□□ -2.15
CD40P25942 RNU6-1054P-201ENST00000411293 104 ntBASIC1.6□□□□□ -2.15
CD40P25942 RPL31P63-201ENST00000422565 375 ntBASIC1.6□□□□□ -2.15
CD40P25942 HMGN2P38-201ENST00000423806 265 ntBASIC1.6□□□□□ -2.15
CD40P25942 RPS23P4-201ENST00000487908 423 ntBASIC1.6□□□□□ -2.15
CD40P25942 MIR2115-201ENST00000516657 100 ntBASIC1.6□□□□□ -2.15
CD40P25942 RNA5SP364-201ENST00000516938 78 ntBASIC1.6□□□□□ -2.15
CD40P25942 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.6□□□□□ -2.15
CD40P25942 MIR6516-201ENST00000630554 81 ntBASIC1.6□□□□□ -2.15
CD40P25942 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.59□□□□□ -2.15
CD40P25942 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.59□□□□□ -2.15
CD40P25942 RNU6-482P-201ENST00000391068 107 ntBASIC1.59□□□□□ -2.15
CD40P25942 AC244023.1-201ENST00000426884 112 ntBASIC1.59□□□□□ -2.15
CD40P25942 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.59□□□□□ -2.15
CD40P25942 AC242498.1-201ENST00000604134 111 ntBASIC1.59□□□□□ -2.15
CD40P25942 AL353997.5-201ENST00000618886 171 ntBASIC1.59□□□□□ -2.15
CD40P25942 RNU6-834P-201ENST00000362367 110 ntBASIC1.58□□□□□ -2.16
CD40P25942 SNORD115-2-201ENST00000362842 82 ntBASIC1.58□□□□□ -2.16
CD40P25942 RNU6-654P-201ENST00000364373 107 ntBASIC1.58□□□□□ -2.16
CD40P25942 SNORD115-20-201ENST00000365099 82 ntBASIC1.58□□□□□ -2.16
CD40P25942 RNU6-1144P-201ENST00000384247 104 ntBASIC1.58□□□□□ -2.16
CD40P25942 MIR9-3-201ENST00000385084 90 ntBASIC1.58□□□□□ -2.16
CD40P25942 RNU6-205P-201ENST00000390858 107 ntBASIC1.58□□□□□ -2.16
CD40P25942 RNU11-2P-201ENST00000516898 142 ntBASIC1.58□□□□□ -2.16
CD40P25942 MIR548AE2-201ENST00000583456 67 ntBASIC1.58□□□□□ -2.16
CD40P25942 AP000753.3-201ENST00000604083 169 ntBASIC1.58□□□□□ -2.16
CD40P25942 MIR6129-201ENST00000616087 109 ntBASIC1.58□□□□□ -2.16
CD40P25942 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.58□□□□□ -2.16
CD40P25942 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
CD40P25942 RNA5SP99-201ENST00000364020 114 ntBASIC1.57□□□□□ -2.16
CD40P25942 SNORA32-201ENST00000384072 121 ntBASIC1.57□□□□□ -2.16
CD40P25942 SNORA18-201ENST00000384416 132 ntBASIC1.57□□□□□ -2.16
CD40P25942 RNU6-342P-201ENST00000384521 104 ntBASIC1.57□□□□□ -2.16
CD40P25942 RNU6-1237P-201ENST00000384777 107 ntBASIC1.57□□□□□ -2.16
CD40P25942 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.57□□□□□ -2.16
CD40P25942 RNU7-6P-201ENST00000516845 62 ntBASIC1.57□□□□□ -2.16
CD40P25942 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.57□□□□□ -2.16
CD40P25942 MIR3163-201ENST00000581592 73 ntBASIC1.57□□□□□ -2.16
CD40P25942 AC084768.2-201ENST00000622736 221 ntBASIC1.57□□□□□ -2.16
CD40P25942 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 172.4 ms