Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.44□□□□□ -2.02
LIG1P18858 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
LIG1P18858 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
LIG1P18858 SNORD77B-201ENST00000391112 67 ntBASIC2.43□□□□□ -2.02
LIG1P18858 RNA5SP57-201ENST00000459463 123 ntBASIC2.43□□□□□ -2.02
LIG1P18858 RNU6-1018P-201ENST00000516577 106 ntBASIC2.43□□□□□ -2.02
LIG1P18858 SNORA74.3-201ENST00000517108 154 ntBASIC2.43□□□□□ -2.02
LIG1P18858 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.43□□□□□ -2.02
LIG1P18858 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.43□□□□□ -2.02
LIG1P18858 RNA5SP138-201ENST00000365098 114 ntBASIC2.42□□□□□ -2.02
LIG1P18858 MIR605-201ENST00000385078 83 ntBASIC2.42□□□□□ -2.02
LIG1P18858 RNU6-360P-201ENST00000390944 104 ntBASIC2.42□□□□□ -2.02
LIG1P18858 RNU6-1190P-201ENST00000410811 104 ntBASIC2.42□□□□□ -2.02
LIG1P18858 AL353813.1-201ENST00000440700 253 ntBASIC2.42□□□□□ -2.02
LIG1P18858 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.42□□□□□ -2.02
LIG1P18858 MIR1270-201ENST00000459320 83 ntBASIC2.42□□□□□ -2.02
LIG1P18858 snoU13.16-201ENST00000459350 104 ntBASIC2.42□□□□□ -2.02
LIG1P18858 RNA5SP200-201ENST00000516360 103 ntBASIC2.42□□□□□ -2.02
LIG1P18858 MIR8055-201ENST00000610739 97 ntBASIC2.42□□□□□ -2.02
LIG1P18858 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
LIG1P18858 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.42□□□□□ -2.02
LIG1P18858 Y_RNA.377-201ENST00000365644 108 ntBASIC2.41□□□□□ -2.02
LIG1P18858 SNORA67.3-201ENST00000384366 140 ntBASIC2.41□□□□□ -2.02
LIG1P18858 RNU6-679P-201ENST00000391003 106 ntBASIC2.41□□□□□ -2.02
LIG1P18858 AL356320.1-201ENST00000429616 163 ntBASIC2.41□□□□□ -2.02
LIG1P18858 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.41□□□□□ -2.02
LIG1P18858 FAM106DP-201ENST00000586416 501 ntBASIC2.41□□□□□ -2.02
LIG1P18858 MIR6715A-201ENST00000615929 79 ntBASIC2.41□□□□□ -2.02
LIG1P18858 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.41□□□□□ -2.02
LIG1P18858 uc_338.20-201ENST00000621563 178 ntBASIC2.41□□□□□ -2.02
LIG1P18858 MIR6132-201ENST00000622083 109 ntBASIC2.41□□□□□ -2.02
LIG1P18858 RNU6-457P-201ENST00000363999 107 ntBASIC2.4□□□□□ -2.03
LIG1P18858 RNU6-616P-201ENST00000384353 107 ntBASIC2.4□□□□□ -2.03
LIG1P18858 SNORA64-201ENST00000384674 134 ntBASIC2.4□□□□□ -2.03
LIG1P18858 RNA5SP489-201ENST00000410986 109 ntBASIC2.4□□□□□ -2.03
LIG1P18858 AC025033.1-201ENST00000463883 194 ntBASIC2.4□□□□□ -2.03
LIG1P18858 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.4□□□□□ -2.03
LIG1P18858 MIR1273D-201ENST00000577266 86 ntBASIC2.4□□□□□ -2.03
LIG1P18858 MIR3945-201ENST00000581853 98 ntBASIC2.4□□□□□ -2.03
LIG1P18858 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
LIG1P18858 RNU6-1123P-201ENST00000362347 106 ntBASIC2.39□□□□□ -2.03
LIG1P18858 RNU6-170P-201ENST00000362832 104 ntBASIC2.39□□□□□ -2.03
LIG1P18858 SNORA48.3-201ENST00000391081 134 ntBASIC2.39□□□□□ -2.03
LIG1P18858 RNA5SP212-201ENST00000391223 107 ntBASIC2.39□□□□□ -2.03
LIG1P18858 AL023284.1-201ENST00000403956 276 ntBASIC2.39□□□□□ -2.03
LIG1P18858 MIR1261-201ENST00000408659 82 ntBASIC2.39□□□□□ -2.03
LIG1P18858 AC004941.2-201ENST00000427009 228 ntBASIC2.39□□□□□ -2.03
LIG1P18858 RNU7-43P-201ENST00000516554 64 ntBASIC2.39□□□□□ -2.03
LIG1P18858 AC026421.1-201ENST00000519101 163 ntBASIC2.39□□□□□ -2.03
LIG1P18858 AC062037.1-201ENST00000605302 128 ntBASIC2.39□□□□□ -2.03
LIG1P18858 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
LIG1P18858 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
LIG1P18858 RNU6-820P-201ENST00000384273 107 ntBASIC2.38□□□□□ -2.03
LIG1P18858 MIR450A2-201ENST00000385022 100 ntBASIC2.38□□□□□ -2.03
LIG1P18858 SNORA7.5-201ENST00000410672 110 ntBASIC2.38□□□□□ -2.03
LIG1P18858 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.38□□□□□ -2.03
LIG1P18858 AC012531.4-201ENST00000616509 177 ntBASIC2.38□□□□□ -2.03
LIG1P18858 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.38□□□□□ -2.03
LIG1P18858 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
LIG1P18858 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
LIG1P18858 RNU6-1201P-201ENST00000384227 107 ntBASIC2.37□□□□□ -2.03
LIG1P18858 SNORA18-201ENST00000384416 132 ntBASIC2.37□□□□□ -2.03
LIG1P18858 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.37□□□□□ -2.03
LIG1P18858 RNU1-41P-201ENST00000516161 162 ntBASIC2.37□□□□□ -2.03
LIG1P18858 RNU1-48P-201ENST00000516400 162 ntBASIC2.37□□□□□ -2.03
LIG1P18858 RNU6-521P-201ENST00000516663 105 ntBASIC2.37□□□□□ -2.03
LIG1P18858 RNA5SP364-201ENST00000516938 78 ntBASIC2.37□□□□□ -2.03
LIG1P18858 SNORA31.17-201ENST00000516953 127 ntBASIC2.37□□□□□ -2.03
LIG1P18858 MIR4648-201ENST00000580107 72 ntBASIC2.37□□□□□ -2.03
LIG1P18858 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
LIG1P18858 SNORA1.1-201ENST00000364671 133 ntBASIC2.36□□□□□ -2.03
LIG1P18858 Y_RNA.290-201ENST00000364879 114 ntBASIC2.36□□□□□ -2.03
LIG1P18858 RNU7-61P-201ENST00000515897 61 ntBASIC2.36□□□□□ -2.03
LIG1P18858 RNU6-795P-201ENST00000516323 103 ntBASIC2.36□□□□□ -2.03
LIG1P18858 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.36□□□□□ -2.03
LIG1P18858 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.36□□□□□ -2.03
LIG1P18858 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.36□□□□□ -2.03
LIG1P18858 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
LIG1P18858 RNU6-1313P-201ENST00000362622 102 ntBASIC2.35□□□□□ -2.03
LIG1P18858 SNORD45B-201ENST00000364617 72 ntBASIC2.35□□□□□ -2.03
LIG1P18858 Y_RNA.354-201ENST00000365448 111 ntBASIC2.35□□□□□ -2.03
LIG1P18858 HMGN1P33-201ENST00000432945 451 ntBASIC2.35□□□□□ -2.03
LIG1P18858 RN7SKP12-201ENST00000516275 143 ntBASIC2.35□□□□□ -2.03
LIG1P18858 RNU1-40P-201ENST00000516816 164 ntBASIC2.35□□□□□ -2.03
LIG1P18858 RNU1-97P-201ENST00000516872 164 ntBASIC2.35□□□□□ -2.03
LIG1P18858 MIR4764-201ENST00000580680 88 ntBASIC2.35□□□□□ -2.03
LIG1P18858 Z97988.1-201ENST00000637697 135 ntBASIC2.35□□□□□ -2.03
LIG1P18858 Y_RNA.96-201ENST00000363092 109 ntBASIC2.34□□□□□ -2.03
LIG1P18858 RNU6-60P-201ENST00000364792 103 ntBASIC2.34□□□□□ -2.03
LIG1P18858 SNORA32-201ENST00000384072 121 ntBASIC2.34□□□□□ -2.03
LIG1P18858 MIR194-1-201ENST00000384892 85 ntBASIC2.34□□□□□ -2.03
LIG1P18858 RNU6-644P-201ENST00000391155 98 ntBASIC2.34□□□□□ -2.03
LIG1P18858 RNU6-917P-201ENST00000516294 104 ntBASIC2.34□□□□□ -2.03
LIG1P18858 AC008133.2-201ENST00000624540 351 ntBASIC2.34□□□□□ -2.03
LIG1P18858 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
LIG1P18858 SNORD115-35-201ENST00000365122 82 ntBASIC2.33□□□□□ -2.04
LIG1P18858 RNU7-35P-201ENST00000517174 62 ntBASIC2.33□□□□□ -2.04
LIG1P18858 MIR4777-201ENST00000583710 86 ntBASIC2.33□□□□□ -2.04
LIG1P18858 SNRPGP19-201ENST00000603826 189 ntBASIC2.33□□□□□ -2.04
LIG1P18858 Y_RNA.783-201ENST00000613546 102 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms