Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 RPS29P29-201ENST00000456396 171 ntBASIC1.86□□□□□ -2.11
COL11A2P13942 RNU6-970P-201ENST00000516312 107 ntBASIC1.86□□□□□ -2.11
COL11A2P13942 RNU6-1018P-201ENST00000516577 106 ntBASIC1.86□□□□□ -2.11
COL11A2P13942 SNORA31.24-201ENST00000517232 57 ntBASIC1.86□□□□□ -2.11
COL11A2P13942 AL353770.2-201ENST00000620024 78 ntBASIC1.86□□□□□ -2.11
COL11A2P13942 SNORA67.1-201ENST00000364749 141 ntBASIC1.86□□□□□ -2.11
COL11A2P13942 SNORA1.2-201ENST00000365189 134 ntBASIC1.86□□□□□ -2.11
COL11A2P13942 SNORA26.2-201ENST00000390922 122 ntBASIC1.86□□□□□ -2.11
COL11A2P13942 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.86□□□□□ -2.11
COL11A2P13942 AL512326.2-201ENST00000426359 151 ntBASIC1.86□□□□□ -2.11
COL11A2P13942 AL354695.1-201ENST00000427935 228 ntBASIC1.86□□□□□ -2.11
COL11A2P13942 RNU7-26P-201ENST00000458980 63 ntBASIC1.86□□□□□ -2.11
COL11A2P13942 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.86□□□□□ -2.11
COL11A2P13942 RN7SL274P-201ENST00000492268 272 ntBASIC1.86□□□□□ -2.11
COL11A2P13942 RNA5SP168-201ENST00000516642 112 ntBASIC1.86□□□□□ -2.11
COL11A2P13942 RNU6-958P-201ENST00000516995 106 ntBASIC1.86□□□□□ -2.11
COL11A2P13942 AC087741.2-201ENST00000619415 172 ntBASIC1.86□□□□□ -2.11
COL11A2P13942 MIR6767-201ENST00000637302 66 ntBASIC1.86□□□□□ -2.11
COL11A2P13942 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
COL11A2P13942 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.85□□□□□ -2.11
COL11A2P13942 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.85□□□□□ -2.11
COL11A2P13942 Y_RNA.360-201ENST00000365512 102 ntBASIC1.85□□□□□ -2.11
COL11A2P13942 Y_RNA.388-201ENST00000383919 113 ntBASIC1.85□□□□□ -2.11
COL11A2P13942 MIR517C-201ENST00000385103 95 ntBASIC1.85□□□□□ -2.11
COL11A2P13942 Y_RNA.601-201ENST00000410500 113 ntBASIC1.85□□□□□ -2.11
COL11A2P13942 SNORA19.1-201ENST00000410656 129 ntBASIC1.85□□□□□ -2.11
COL11A2P13942 RNA5SP489-201ENST00000410986 109 ntBASIC1.85□□□□□ -2.11
COL11A2P13942 POLR2J4-204ENST00000418424 324 ntBASIC1.85□□□□□ -2.11
COL11A2P13942 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.85□□□□□ -2.11
COL11A2P13942 AC113410.1-201ENST00000505029 247 ntBASIC1.85□□□□□ -2.11
COL11A2P13942 SNORA31.10-201ENST00000516482 106 ntBASIC1.85□□□□□ -2.11
COL11A2P13942 MIR548AR-201ENST00000582191 57 ntBASIC1.85□□□□□ -2.11
COL11A2P13942 MIR4452-201ENST00000583004 71 ntBASIC1.85□□□□□ -2.11
COL11A2P13942 AC015726.2-201ENST00000620112 122 ntBASIC1.85□□□□□ -2.11
COL11A2P13942 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.85□□□□□ -2.11
COL11A2P13942 SNORA38-201ENST00000363946 132 ntBASIC1.84□□□□□ -2.11
COL11A2P13942 Y_RNA.220-201ENST00000364244 109 ntBASIC1.84□□□□□ -2.11
COL11A2P13942 MIR450A2-201ENST00000385022 100 ntBASIC1.84□□□□□ -2.11
COL11A2P13942 MIR577-201ENST00000385196 96 ntBASIC1.84□□□□□ -2.11
COL11A2P13942 SNORA31.4-201ENST00000516049 129 ntBASIC1.84□□□□□ -2.11
COL11A2P13942 SUB1P4-201ENST00000566062 339 ntBASIC1.84□□□□□ -2.11
COL11A2P13942 AL442128.1-201ENST00000615151 90 ntBASIC1.84□□□□□ -2.11
COL11A2P13942 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.84□□□□□ -2.11
COL11A2P13942 Y_RNA.93-201ENST00000363066 109 ntBASIC1.83□□□□□ -2.12
COL11A2P13942 RNU1-148P-201ENST00000384472 162 ntBASIC1.83□□□□□ -2.12
COL11A2P13942 RNU6-1067P-201ENST00000384752 107 ntBASIC1.83□□□□□ -2.12
COL11A2P13942 MIR144-201ENST00000384886 86 ntBASIC1.83□□□□□ -2.12
COL11A2P13942 RNU6-360P-201ENST00000390944 104 ntBASIC1.83□□□□□ -2.12
COL11A2P13942 RNA5SP137-201ENST00000516833 135 ntBASIC1.83□□□□□ -2.12
COL11A2P13942 ZNF209P-201ENST00000593450 2304 ntBASIC1.83□□□□□ -2.12
COL11A2P13942 RNU6-363P-201ENST00000362895 105 ntBASIC1.83□□□□□ -2.12
COL11A2P13942 Y_RNA.558-201ENST00000384685 113 ntBASIC1.83□□□□□ -2.12
COL11A2P13942 SNORA67.6-201ENST00000391093 99 ntBASIC1.83□□□□□ -2.12
COL11A2P13942 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.83□□□□□ -2.12
COL11A2P13942 Y_RNA.773-201ENST00000607168 90 ntBASIC1.83□□□□□ -2.12
COL11A2P13942 AC022202.1-201ENST00000613515 211 ntBASIC1.83□□□□□ -2.12
COL11A2P13942 RNU6-832P-201ENST00000363319 107 ntBASIC1.82□□□□□ -2.12
COL11A2P13942 MIR605-201ENST00000385078 83 ntBASIC1.82□□□□□ -2.12
COL11A2P13942 AL034345.1-201ENST00000407768 123 ntBASIC1.82□□□□□ -2.12
COL11A2P13942 RNU7-113P-201ENST00000459273 62 ntBASIC1.82□□□□□ -2.12
COL11A2P13942 AC107297.1-201ENST00000459991 176 ntBASIC1.82□□□□□ -2.12
COL11A2P13942 RNU7-6P-201ENST00000516845 62 ntBASIC1.82□□□□□ -2.12
COL11A2P13942 AC022523.2-201ENST00000561045 150 ntBASIC1.82□□□□□ -2.12
COL11A2P13942 AC012493.3-201ENST00000604494 112 ntBASIC1.82□□□□□ -2.12
COL11A2P13942 RNY3P2-201ENST00000362918 102 ntBASIC1.81□□□□□ -2.12
COL11A2P13942 RNU4-67P-201ENST00000364569 141 ntBASIC1.81□□□□□ -2.12
COL11A2P13942 RNU4-16P-201ENST00000364737 141 ntBASIC1.81□□□□□ -2.12
COL11A2P13942 SNORD114-22-201ENST00000365423 72 ntBASIC1.81□□□□□ -2.12
COL11A2P13942 SNORA6-201ENST00000384033 151 ntBASIC1.81□□□□□ -2.12
COL11A2P13942 SNORA24-201ENST00000384096 131 ntBASIC1.81□□□□□ -2.12
COL11A2P13942 RNU6-733P-201ENST00000410759 104 ntBASIC1.81□□□□□ -2.12
COL11A2P13942 RNY4P29-201ENST00000410801 97 ntBASIC1.81□□□□□ -2.12
COL11A2P13942 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.81□□□□□ -2.12
COL11A2P13942 RNU7-73P-201ENST00000458743 63 ntBASIC1.81□□□□□ -2.12
COL11A2P13942 RNU7-96P-201ENST00000459535 64 ntBASIC1.81□□□□□ -2.12
COL11A2P13942 SCARNA23-201ENST00000516060 130 ntBASIC1.81□□□□□ -2.12
COL11A2P13942 MIR3660-201ENST00000584845 100 ntBASIC1.81□□□□□ -2.12
COL11A2P13942 AC021613.1-201ENST00000623880 111 ntBASIC1.81□□□□□ -2.12
COL11A2P13942 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
COL11A2P13942 SNORD115-19-201ENST00000363098 82 ntBASIC1.8□□□□□ -2.12
COL11A2P13942 SNORD115-18-201ENST00000363293 82 ntBASIC1.8□□□□□ -2.12
COL11A2P13942 SNORD115-17-201ENST00000364612 82 ntBASIC1.8□□□□□ -2.12
COL11A2P13942 RNA5SP173-201ENST00000364857 136 ntBASIC1.8□□□□□ -2.12
COL11A2P13942 RNU6-409P-201ENST00000384114 104 ntBASIC1.8□□□□□ -2.12
COL11A2P13942 Y_RNA.537-201ENST00000384626 109 ntBASIC1.8□□□□□ -2.12
COL11A2P13942 SUMO2P12-201ENST00000405924 140 ntBASIC1.8□□□□□ -2.12
COL11A2P13942 RNA5SP144-201ENST00000410846 116 ntBASIC1.8□□□□□ -2.12
COL11A2P13942 STAG3L5P-204ENST00000443759 179 ntBASIC1.8□□□□□ -2.12
COL11A2P13942 RNU7-67P-201ENST00000459003 62 ntBASIC1.8□□□□□ -2.12
COL11A2P13942 RPS23P4-201ENST00000487908 423 ntBASIC1.8□□□□□ -2.12
COL11A2P13942 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.8□□□□□ -2.12
COL11A2P13942 MIR203B-201ENST00000636080 86 ntBASIC1.8□□□□□ -2.12
COL11A2P13942 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
COL11A2P13942 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
COL11A2P13942 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
COL11A2P13942 SNORD115-2-201ENST00000362842 82 ntBASIC1.8□□□□□ -2.12
COL11A2P13942 Y_RNA.155-201ENST00000363632 101 ntBASIC1.8□□□□□ -2.12
COL11A2P13942 SNORD115-20-201ENST00000365099 82 ntBASIC1.8□□□□□ -2.12
COL11A2P13942 RNU6-820P-201ENST00000384273 107 ntBASIC1.8□□□□□ -2.12
COL11A2P13942 MIR516B2-201ENST00000385190 85 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms