Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 RNA5SP272-201ENST00000516095 111 ntBASIC1.1□□□□□ -2.23
HLA-DOBP13765 MIR3121-201ENST00000579680 77 ntBASIC1.1□□□□□ -2.23
HLA-DOBP13765 MIR4769-201ENST00000584126 77 ntBASIC1.1□□□□□ -2.23
HLA-DOBP13765 MIR6717-201ENST00000622747 73 ntBASIC1.1□□□□□ -2.23
HLA-DOBP13765 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.09□□□□□ -2.23
HLA-DOBP13765 MIR378A-201ENST00000362177 66 ntBASIC1.09□□□□□ -2.23
HLA-DOBP13765 RNU6-690P-201ENST00000365242 106 ntBASIC1.09□□□□□ -2.23
HLA-DOBP13765 Y_RNA.354-201ENST00000365448 111 ntBASIC1.09□□□□□ -2.23
HLA-DOBP13765 SNORA80D-201ENST00000384488 135 ntBASIC1.09□□□□□ -2.23
HLA-DOBP13765 SNORD38B-201ENST00000384690 67 ntBASIC1.09□□□□□ -2.23
HLA-DOBP13765 MT-TN-201ENST00000387400 73 ntBASIC1.09□□□□□ -2.23
HLA-DOBP13765 RNU6-910P-201ENST00000390844 107 ntBASIC1.09□□□□□ -2.23
HLA-DOBP13765 RNU6-1190P-201ENST00000410811 104 ntBASIC1.09□□□□□ -2.23
HLA-DOBP13765 MTND4LP9-201ENST00000427694 174 ntBASIC1.09□□□□□ -2.23
HLA-DOBP13765 HMGN1P33-201ENST00000432945 451 ntBASIC1.09□□□□□ -2.23
HLA-DOBP13765 RNU7-45P-201ENST00000459460 63 ntBASIC1.09□□□□□ -2.23
HLA-DOBP13765 SEPT14P17-201ENST00000617978 177 ntBASIC1.09□□□□□ -2.23
HLA-DOBP13765 SNORD38B-202ENST00000625943 69 ntBASIC1.09□□□□□ -2.23
HLA-DOBP13765 SNORD12-201ENST00000391002 90 ntBASIC1.08□□□□□ -2.24
HLA-DOBP13765 RNU6-613P-201ENST00000410412 108 ntBASIC1.08□□□□□ -2.24
HLA-DOBP13765 AL591704.2-201ENST00000421658 181 ntBASIC1.08□□□□□ -2.24
HLA-DOBP13765 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.08□□□□□ -2.24
HLA-DOBP13765 SNORD79.1-201ENST00000516069 84 ntBASIC1.08□□□□□ -2.24
HLA-DOBP13765 RN7SKP179-201ENST00000516126 217 ntBASIC1.08□□□□□ -2.24
HLA-DOBP13765 SNORA70.22-201ENST00000517160 124 ntBASIC1.08□□□□□ -2.24
HLA-DOBP13765 AL353770.2-201ENST00000620024 78 ntBASIC1.08□□□□□ -2.24
HLA-DOBP13765 AC091895.1-201ENST00000624494 256 ntBASIC1.08□□□□□ -2.24
HLA-DOBP13765 MIR6841-201ENST00000637129 72 ntBASIC1.08□□□□□ -2.24
HLA-DOBP13765 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
HLA-DOBP13765 RNU6-508P-201ENST00000363231 103 ntBASIC1.07□□□□□ -2.24
HLA-DOBP13765 RNU4-16P-201ENST00000364737 141 ntBASIC1.07□□□□□ -2.24
HLA-DOBP13765 Y_RNA.363-201ENST00000365529 113 ntBASIC1.07□□□□□ -2.24
HLA-DOBP13765 MIR539-201ENST00000365690 78 ntBASIC1.07□□□□□ -2.24
HLA-DOBP13765 Y_RNA.586-201ENST00000391146 98 ntBASIC1.07□□□□□ -2.24
HLA-DOBP13765 RNU6-602P-201ENST00000411155 105 ntBASIC1.07□□□□□ -2.24
HLA-DOBP13765 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.07□□□□□ -2.24
HLA-DOBP13765 RNU5E-3P-201ENST00000515913 68 ntBASIC1.07□□□□□ -2.24
HLA-DOBP13765 RNU6-240P-201ENST00000516098 97 ntBASIC1.07□□□□□ -2.24
HLA-DOBP13765 AC133485.4-201ENST00000561835 220 ntBASIC1.07□□□□□ -2.24
HLA-DOBP13765 AC138907.4-201ENST00000570107 226 ntBASIC1.07□□□□□ -2.24
HLA-DOBP13765 MIR4264-201ENST00000583520 66 ntBASIC1.07□□□□□ -2.24
HLA-DOBP13765 HSPE1P19-201ENST00000603327 295 ntBASIC1.07□□□□□ -2.24
HLA-DOBP13765 AP000753.3-201ENST00000604083 169 ntBASIC1.07□□□□□ -2.24
HLA-DOBP13765 AL157834.3-201ENST00000615543 103 ntBASIC1.07□□□□□ -2.24
HLA-DOBP13765 MIR6516-201ENST00000630554 81 ntBASIC1.07□□□□□ -2.24
HLA-DOBP13765 MIR377-201ENST00000362145 69 ntBASIC1.06□□□□□ -2.24
HLA-DOBP13765 MIR26B-201ENST00000362251 77 ntBASIC1.06□□□□□ -2.24
HLA-DOBP13765 RNA5SP327-201ENST00000362494 101 ntBASIC1.06□□□□□ -2.24
HLA-DOBP13765 SNORA22.1-201ENST00000362701 134 ntBASIC1.06□□□□□ -2.24
HLA-DOBP13765 Y_RNA.114-201ENST00000363265 113 ntBASIC1.06□□□□□ -2.24
HLA-DOBP13765 RNU6-647P-201ENST00000364243 107 ntBASIC1.06□□□□□ -2.24
HLA-DOBP13765 SNORA25-201ENST00000384384 134 ntBASIC1.06□□□□□ -2.24
HLA-DOBP13765 SNORA75.2-201ENST00000391138 150 ntBASIC1.06□□□□□ -2.24
HLA-DOBP13765 SNORA75.3-201ENST00000391231 150 ntBASIC1.06□□□□□ -2.24
HLA-DOBP13765 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.06□□□□□ -2.24
HLA-DOBP13765 AC090844.1-201ENST00000422019 156 ntBASIC1.06□□□□□ -2.24
HLA-DOBP13765 TMSB4XP3-201ENST00000445144 114 ntBASIC1.06□□□□□ -2.24
HLA-DOBP13765 RNU7-21P-201ENST00000459430 62 ntBASIC1.06□□□□□ -2.24
HLA-DOBP13765 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.06□□□□□ -2.24
HLA-DOBP13765 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
HLA-DOBP13765 Y_RNA.280-201ENST00000364765 112 ntBASIC1.05□□□□□ -2.24
HLA-DOBP13765 MIR222-201ENST00000384992 110 ntBASIC1.05□□□□□ -2.24
HLA-DOBP13765 RNA5SP144-201ENST00000410846 116 ntBASIC1.05□□□□□ -2.24
HLA-DOBP13765 AL022718.1-201ENST00000412004 84 ntBASIC1.05□□□□□ -2.24
HLA-DOBP13765 AC021443.1-201ENST00000604478 211 ntBASIC1.05□□□□□ -2.24
HLA-DOBP13765 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.05□□□□□ -2.24
HLA-DOBP13765 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
HLA-DOBP13765 POLR2J4-204ENST00000418424 324 ntBASIC1.04□□□□□ -2.24
HLA-DOBP13765 MRPL35P3-201ENST00000421557 364 ntBASIC1.04□□□□□ -2.24
HLA-DOBP13765 AL158147.1-201ENST00000443970 75 ntBASIC1.04□□□□□ -2.24
HLA-DOBP13765 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.04□□□□□ -2.24
HLA-DOBP13765 RNU7-90P-201ENST00000459216 62 ntBASIC1.04□□□□□ -2.24
HLA-DOBP13765 MIR4305-201ENST00000583252 102 ntBASIC1.04□□□□□ -2.24
HLA-DOBP13765 AC108081.1-201ENST00000604358 221 ntBASIC1.04□□□□□ -2.24
HLA-DOBP13765 AL137067.1-201ENST00000615933 120 ntBASIC1.04□□□□□ -2.24
HLA-DOBP13765 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.04□□□□□ -2.24
HLA-DOBP13765 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
HLA-DOBP13765 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
HLA-DOBP13765 Y_RNA.294-201ENST00000364916 102 ntBASIC1.03□□□□□ -2.24
HLA-DOBP13765 Y_RNA.330-201ENST00000365230 109 ntBASIC1.03□□□□□ -2.24
HLA-DOBP13765 Y_RNA.366-201ENST00000365540 102 ntBASIC1.03□□□□□ -2.24
HLA-DOBP13765 AC244023.1-201ENST00000426884 112 ntBASIC1.03□□□□□ -2.24
HLA-DOBP13765 AC242498.1-201ENST00000604134 111 ntBASIC1.03□□□□□ -2.24
HLA-DOBP13765 AC027335.2-201ENST00000624030 375 ntBASIC1.03□□□□□ -2.24
HLA-DOBP13765 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
HLA-DOBP13765 Y_RNA.168-201ENST00000363740 102 ntBASIC1.02□□□□□ -2.25
HLA-DOBP13765 RNU6-654P-201ENST00000364373 107 ntBASIC1.02□□□□□ -2.25
HLA-DOBP13765 RNU7-164P-201ENST00000459221 62 ntBASIC1.02□□□□□ -2.25
HLA-DOBP13765 RNA5SP458-201ENST00000516188 119 ntBASIC1.02□□□□□ -2.25
HLA-DOBP13765 AC019288.1-201ENST00000557918 224 ntBASIC1.02□□□□□ -2.25
HLA-DOBP13765 SNORD113.3-201ENST00000364630 78 ntBASIC1.01□□□□□ -2.25
HLA-DOBP13765 SNORA25.8-201ENST00000364831 128 ntBASIC1.01□□□□□ -2.25
HLA-DOBP13765 Y_RNA.298-201ENST00000364960 107 ntBASIC1.01□□□□□ -2.25
HLA-DOBP13765 RNU6-580P-201ENST00000365159 107 ntBASIC1.01□□□□□ -2.25
HLA-DOBP13765 MIR150-201ENST00000385048 84 ntBASIC1.01□□□□□ -2.25
HLA-DOBP13765 SNORD111-201ENST00000408139 94 ntBASIC1.01□□□□□ -2.25
HLA-DOBP13765 AC063976.4-201ENST00000421971 163 ntBASIC1.01□□□□□ -2.25
HLA-DOBP13765 RNU6-1211P-201ENST00000459179 105 ntBASIC1.01□□□□□ -2.25
HLA-DOBP13765 AC113410.1-201ENST00000505029 247 ntBASIC1.01□□□□□ -2.25
HLA-DOBP13765 RNU6-971P-201ENST00000516920 106 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 222.5 ms