Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 RNU6-950P-201ENST00000384651 107 ntBASIC2.54□□□□□ -2
BMP3P12645 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.54□□□□□ -2
BMP3P12645 RNU7-2P-201ENST00000516096 62 ntBASIC2.54□□□□□ -2
BMP3P12645 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC2.54□□□□□ -2
BMP3P12645 AL137847.3-201ENST00000611521 109 ntBASIC2.54□□□□□ -2
BMP3P12645 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.54□□□□□ -2
BMP3P12645 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
BMP3P12645 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
BMP3P12645 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
BMP3P12645 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.53□□□□□ -2
BMP3P12645 SNORA67.3-201ENST00000384366 140 ntBASIC2.53□□□□□ -2
BMP3P12645 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.53□□□□□ -2
BMP3P12645 SCARNA16.3-201ENST00000516595 184 ntBASIC2.53□□□□□ -2
BMP3P12645 SEPT14P17-201ENST00000617978 177 ntBASIC2.53□□□□□ -2
BMP3P12645 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.53□□□□□ -2
BMP3P12645 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.52□□□□□ -2.01
BMP3P12645 RNU6-633P-201ENST00000362612 103 ntBASIC2.52□□□□□ -2.01
BMP3P12645 RNU6-652P-201ENST00000365488 107 ntBASIC2.52□□□□□ -2.01
BMP3P12645 AL023284.1-201ENST00000403956 276 ntBASIC2.52□□□□□ -2.01
BMP3P12645 AL445685.2-201ENST00000422551 342 ntBASIC2.52□□□□□ -2.01
BMP3P12645 HMGN1P33-201ENST00000432945 451 ntBASIC2.52□□□□□ -2.01
BMP3P12645 SNORD123-201ENST00000459473 70 ntBASIC2.52□□□□□ -2.01
BMP3P12645 MIR219B-201ENST00000637023 88 ntBASIC2.52□□□□□ -2.01
BMP3P12645 SNORD114-1-201ENST00000362705 72 ntBASIC2.51□□□□□ -2.01
BMP3P12645 SNORD38.1-201ENST00000363863 68 ntBASIC2.51□□□□□ -2.01
BMP3P12645 RNU6-342P-201ENST00000384521 104 ntBASIC2.51□□□□□ -2.01
BMP3P12645 MIR206-201ENST00000384872 86 ntBASIC2.51□□□□□ -2.01
BMP3P12645 MIR526A1-201ENST00000384897 85 ntBASIC2.51□□□□□ -2.01
BMP3P12645 MIR597-201ENST00000384968 97 ntBASIC2.51□□□□□ -2.01
BMP3P12645 RNU6-482P-201ENST00000391068 107 ntBASIC2.51□□□□□ -2.01
BMP3P12645 AL449363.1-201ENST00000617815 186 ntBASIC2.51□□□□□ -2.01
BMP3P12645 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.51□□□□□ -2.01
BMP3P12645 RNU1-109P-201ENST00000383960 147 ntBASIC2.5□□□□□ -2.01
BMP3P12645 MIR34C-201ENST00000384831 77 ntBASIC2.5□□□□□ -2.01
BMP3P12645 Y_RNA.609-201ENST00000410669 89 ntBASIC2.5□□□□□ -2.01
BMP3P12645 AL591806.2-201ENST00000433122 173 ntBASIC2.5□□□□□ -2.01
BMP3P12645 AC108210.2-201ENST00000503681 201 ntBASIC2.5□□□□□ -2.01
BMP3P12645 RNU7-35P-201ENST00000517174 62 ntBASIC2.5□□□□□ -2.01
BMP3P12645 MIR8055-201ENST00000610739 97 ntBASIC2.5□□□□□ -2.01
BMP3P12645 SNORD3E-202ENST00000627253 216 ntBASIC2.5□□□□□ -2.01
BMP3P12645 MIR4662A-201ENST00000637499 67 ntBASIC2.5□□□□□ -2.01
BMP3P12645 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
BMP3P12645 RNU6-776P-201ENST00000364403 104 ntBASIC2.49□□□□□ -2.01
BMP3P12645 RNU6-1022P-201ENST00000365049 104 ntBASIC2.49□□□□□ -2.01
BMP3P12645 Y_RNA.537-201ENST00000384626 109 ntBASIC2.49□□□□□ -2.01
BMP3P12645 MIR627-201ENST00000384979 97 ntBASIC2.49□□□□□ -2.01
BMP3P12645 SNORA48.3-201ENST00000391081 134 ntBASIC2.49□□□□□ -2.01
BMP3P12645 Y_RNA.607-201ENST00000410597 98 ntBASIC2.49□□□□□ -2.01
BMP3P12645 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
BMP3P12645 RNU6-1244P-201ENST00000363614 108 ntBASIC2.48□□□□□ -2.01
BMP3P12645 RNU11-3P-201ENST00000391111 133 ntBASIC2.48□□□□□ -2.01
BMP3P12645 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.48□□□□□ -2.01
BMP3P12645 MIR1283-2-201ENST00000408621 87 ntBASIC2.48□□□□□ -2.01
BMP3P12645 AC245047.7-201ENST00000440265 293 ntBASIC2.48□□□□□ -2.01
BMP3P12645 RNVU1-2-201ENST00000516326 135 ntBASIC2.48□□□□□ -2.01
BMP3P12645 RNA5SP402-201ENST00000517148 110 ntBASIC2.48□□□□□ -2.01
BMP3P12645 AC021506.2-201ENST00000612354 169 ntBASIC2.48□□□□□ -2.01
BMP3P12645 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
BMP3P12645 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
BMP3P12645 AC080100.1-201ENST00000624239 5356 ntBASIC2.47□□□□□ -2.01
BMP3P12645 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
BMP3P12645 Y_RNA.316-201ENST00000365118 111 ntBASIC2.47□□□□□ -2.01
BMP3P12645 RNU1-138P-201ENST00000384093 164 ntBASIC2.47□□□□□ -2.01
BMP3P12645 RNU1-148P-201ENST00000384472 162 ntBASIC2.47□□□□□ -2.01
BMP3P12645 MIR1289-2-201ENST00000408360 111 ntBASIC2.47□□□□□ -2.01
BMP3P12645 RPS29P28-201ENST00000446439 141 ntBASIC2.47□□□□□ -2.01
BMP3P12645 RNA5SP437-201ENST00000517249 129 ntBASIC2.47□□□□□ -2.01
BMP3P12645 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.47□□□□□ -2.01
BMP3P12645 MIR8065-201ENST00000620577 100 ntBASIC2.47□□□□□ -2.01
BMP3P12645 AL513423.1-201ENST00000621695 132 ntBASIC2.47□□□□□ -2.01
BMP3P12645 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.47□□□□□ -2.01
BMP3P12645 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.46□□□□□ -2.01
BMP3P12645 Y_RNA.94-201ENST00000363068 106 ntBASIC2.46□□□□□ -2.02
BMP3P12645 MIR660-201ENST00000385235 97 ntBASIC2.46□□□□□ -2.02
BMP3P12645 HMGN2P3-201ENST00000433603 273 ntBASIC2.46□□□□□ -2.02
BMP3P12645 HMGN2P5-201ENST00000436882 273 ntBASIC2.46□□□□□ -2.02
BMP3P12645 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
BMP3P12645 snoU13.16-201ENST00000459350 104 ntBASIC2.46□□□□□ -2.02
BMP3P12645 AC099513.1-201ENST00000490423 301 ntBASIC2.46□□□□□ -2.02
BMP3P12645 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.46□□□□□ -2.02
BMP3P12645 VTRNA1-1-201ENST00000363120 99 ntBASIC2.45□□□□□ -2.02
BMP3P12645 SNORD115-27-201ENST00000364430 82 ntBASIC2.45□□□□□ -2.02
BMP3P12645 Y_RNA.567-201ENST00000384736 106 ntBASIC2.45□□□□□ -2.02
BMP3P12645 MIR764-201ENST00000390811 85 ntBASIC2.45□□□□□ -2.02
BMP3P12645 MIR548G-201ENST00000408442 89 ntBASIC2.45□□□□□ -2.02
BMP3P12645 RNU6-613P-201ENST00000410412 108 ntBASIC2.45□□□□□ -2.02
BMP3P12645 HMGN2P35-201ENST00000412164 270 ntBASIC2.45□□□□□ -2.02
BMP3P12645 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2.45□□□□□ -2.02
BMP3P12645 AL603825.1-201ENST00000438481 80 ntBASIC2.45□□□□□ -2.02
BMP3P12645 SNORD67.1-201ENST00000516618 108 ntBASIC2.45□□□□□ -2.02
BMP3P12645 MIR3126-201ENST00000577443 74 ntBASIC2.45□□□□□ -2.02
BMP3P12645 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
BMP3P12645 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
BMP3P12645 Y_RNA.448-201ENST00000384185 108 ntBASIC2.44□□□□□ -2.02
BMP3P12645 MIR520A-201ENST00000384862 85 ntBASIC2.44□□□□□ -2.02
BMP3P12645 RNU7-79P-201ENST00000516082 62 ntBASIC2.44□□□□□ -2.02
BMP3P12645 RNA5SP137-201ENST00000516833 135 ntBASIC2.44□□□□□ -2.02
BMP3P12645 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.44□□□□□ -2.02
BMP3P12645 SUB1P4-201ENST00000566062 339 ntBASIC2.44□□□□□ -2.02
BMP3P12645 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms