Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 AC108729.2-201ENST00000476543 840 ntBASIC-0.88□□□□□ -2.55
COL6A3P12111 AC068339.1-201ENST00000526965 141 ntBASIC-0.88□□□□□ -2.55
COL6A3P12111 AC145350.1-201ENST00000567426 208 ntBASIC-0.88□□□□□ -2.55
COL6A3P12111 MIR548AY-201ENST00000617669 107 ntBASIC-0.88□□□□□ -2.55
COL6A3P12111 SEPT14P19-203ENST00000633205 211 ntBASIC-0.88□□□□□ -2.55
COL6A3P12111 MIR216B-201ENST00000390186 82 ntBASIC-0.89□□□□□ -2.55
COL6A3P12111 MTATP6P20-201ENST00000414147 562 ntBASIC-0.89□□□□□ -2.55
COL6A3P12111 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.89□□□□□ -2.55
COL6A3P12111 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.89□□□□□ -2.55
COL6A3P12111 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-0.89□□□□□ -2.55
COL6A3P12111 Y_RNA.319-201ENST00000365138 92 ntBASIC-0.89□□□□□ -2.55
COL6A3P12111 SNORA20-201ENST00000384662 132 ntBASIC-0.89□□□□□ -2.55
COL6A3P12111 RNU6-592P-201ENST00000411333 103 ntBASIC-0.89□□□□□ -2.55
COL6A3P12111 CYCSP46-201ENST00000423569 204 ntBASIC-0.89□□□□□ -2.55
COL6A3P12111 RNU6-893P-201ENST00000458841 100 ntBASIC-0.89□□□□□ -2.55
COL6A3P12111 RNU6-998P-201ENST00000515894 101 ntBASIC-0.89□□□□□ -2.55
COL6A3P12111 RNU1-54P-201ENST00000517181 120 ntBASIC-0.89□□□□□ -2.55
COL6A3P12111 AC104010.1-201ENST00000616889 150 ntBASIC-0.89□□□□□ -2.55
COL6A3P12111 AL607023.1-201ENST00000620045 248 ntBASIC-0.89□□□□□ -2.55
COL6A3P12111 AL669831.3-213ENST00000636676 183 ntBASIC-0.89□□□□□ -2.55
COL6A3P12111 RNU6-653P-201ENST00000363074 106 ntBASIC-0.9□□□□□ -2.55
COL6A3P12111 Y_RNA.241-201ENST00000364470 117 ntBASIC-0.9□□□□□ -2.55
COL6A3P12111 RNU6-337P-201ENST00000391243 106 ntBASIC-0.9□□□□□ -2.55
COL6A3P12111 MTCYBP36-201ENST00000404146 440 ntBASIC-0.9□□□□□ -2.55
COL6A3P12111 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-0.9□□□□□ -2.55
COL6A3P12111 MTCO2P16-201ENST00000436962 677 ntBASIC-0.9□□□□□ -2.55
COL6A3P12111 AC112204.1-201ENST00000502591 103 ntBASIC-0.9□□□□□ -2.55
COL6A3P12111 RNU2-69P-201ENST00000516061 100 ntBASIC-0.9□□□□□ -2.55
COL6A3P12111 RNU6-1012P-201ENST00000516606 109 ntBASIC-0.9□□□□□ -2.55
COL6A3P12111 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-0.9□□□□□ -2.55
COL6A3P12111 CLPTM1LP1-201ENST00000604519 484 ntBASIC-0.9□□□□□ -2.55
COL6A3P12111 RNU6-454P-201ENST00000364292 107 ntBASIC-0.9□□□□□ -2.55
COL6A3P12111 SNORA62.4-201ENST00000365504 151 ntBASIC-0.9□□□□□ -2.55
COL6A3P12111 SNORD61-201ENST00000384252 73 ntBASIC-0.9□□□□□ -2.55
COL6A3P12111 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.9□□□□□ -2.55
COL6A3P12111 RNU2-51P-201ENST00000410708 197 ntBASIC-0.9□□□□□ -2.55
COL6A3P12111 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-0.9□□□□□ -2.55
COL6A3P12111 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-0.9□□□□□ -2.55
COL6A3P12111 RNU7-45P-201ENST00000459460 63 ntBASIC-0.9□□□□□ -2.55
COL6A3P12111 AP003181.2-201ENST00000528941 181 ntBASIC-0.9□□□□□ -2.55
COL6A3P12111 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-0.9□□□□□ -2.55
COL6A3P12111 Y_RNA.830-201ENST00000628531 96 ntBASIC-0.9□□□□□ -2.55
COL6A3P12111 RNU6-456P-201ENST00000384493 107 ntBASIC-0.9□□□□□ -2.55
COL6A3P12111 MIR548A2-201ENST00000384956 97 ntBASIC-0.9□□□□□ -2.55
COL6A3P12111 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.9□□□□□ -2.55
COL6A3P12111 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-0.9□□□□□ -2.55
COL6A3P12111 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-0.9□□□□□ -2.55
COL6A3P12111 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-0.9□□□□□ -2.55
COL6A3P12111 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-0.9□□□□□ -2.55
COL6A3P12111 HULC.1-201ENST00000612720 240 ntBASIC-0.9□□□□□ -2.55
COL6A3P12111 SNORA51.5-201ENST00000384126 131 ntBASIC-0.91□□□□□ -2.55
COL6A3P12111 Y_RNA.472-201ENST00000384322 102 ntBASIC-0.91□□□□□ -2.55
COL6A3P12111 RNY3P4-201ENST00000384428 101 ntBASIC-0.91□□□□□ -2.55
COL6A3P12111 EIF1P2-201ENST00000428233 350 ntBASIC-0.91□□□□□ -2.55
COL6A3P12111 DLGAP5P1-201ENST00000430307 464 ntBASIC-0.91□□□□□ -2.55
COL6A3P12111 AL161932.1-201ENST00000437408 146 ntBASIC-0.91□□□□□ -2.55
COL6A3P12111 AL353691.2-201ENST00000443795 59 ntBASIC-0.91□□□□□ -2.55
COL6A3P12111 RNU7-80P-201ENST00000459562 61 ntBASIC-0.91□□□□□ -2.55
COL6A3P12111 AC116353.3-201ENST00000511215 249 ntBASIC-0.91□□□□□ -2.55
COL6A3P12111 AC141846.1-201ENST00000568348 142 ntBASIC-0.91□□□□□ -2.55
COL6A3P12111 MIR6874-201ENST00000635894 71 ntBASIC-0.91□□□□□ -2.55
COL6A3P12111 RNU6-1287P-201ENST00000362914 107 ntBASIC-0.91□□□□□ -2.56
COL6A3P12111 RNU6-433P-201ENST00000363216 104 ntBASIC-0.91□□□□□ -2.56
COL6A3P12111 RNU5B-4P-201ENST00000363508 111 ntBASIC-0.91□□□□□ -2.56
COL6A3P12111 SNORD115-32-201ENST00000364079 82 ntBASIC-0.91□□□□□ -2.56
COL6A3P12111 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.91□□□□□ -2.56
COL6A3P12111 RNY1P2-201ENST00000364820 117 ntBASIC-0.91□□□□□ -2.56
COL6A3P12111 RNU6-224P-201ENST00000384055 107 ntBASIC-0.91□□□□□ -2.56
COL6A3P12111 RNU6-1060P-201ENST00000384664 107 ntBASIC-0.91□□□□□ -2.56
COL6A3P12111 MIR190B-201ENST00000401119 79 ntBASIC-0.91□□□□□ -2.56
COL6A3P12111 SNORD63B-201ENST00000411005 70 ntBASIC-0.91□□□□□ -2.56
COL6A3P12111 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-0.91□□□□□ -2.56
COL6A3P12111 RNU7-141P-201ENST00000459304 62 ntBASIC-0.91□□□□□ -2.56
COL6A3P12111 ACA59.1-201ENST00000515966 143 ntBASIC-0.91□□□□□ -2.56
COL6A3P12111 Y_RNA.672-201ENST00000516289 104 ntBASIC-0.91□□□□□ -2.56
COL6A3P12111 CPDP1-201ENST00000579660 283 ntBASIC-0.91□□□□□ -2.56
COL6A3P12111 Z84480.1-201ENST00000605131 311 ntBASIC-0.91□□□□□ -2.56
COL6A3P12111 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-0.91□□□□□ -2.56
COL6A3P12111 RNU6-606P-201ENST00000384721 111 ntBASIC-0.92□□□□□ -2.56
COL6A3P12111 MIR487B-201ENST00000385021 84 ntBASIC-0.92□□□□□ -2.56
COL6A3P12111 Y_RNA.587-201ENST00000391210 103 ntBASIC-0.92□□□□□ -2.56
COL6A3P12111 AC018880.2-201ENST00000414265 201 ntBASIC-0.92□□□□□ -2.56
COL6A3P12111 MTND3P21-201ENST00000433774 331 ntBASIC-0.92□□□□□ -2.56
COL6A3P12111 RPS3AP52-201ENST00000435639 297 ntBASIC-0.92□□□□□ -2.56
COL6A3P12111 AC124312.5-201ENST00000604451 268 ntBASIC-0.92□□□□□ -2.56
COL6A3P12111 AC004467.1-201ENST00000615678 330 ntBASIC-0.92□□□□□ -2.56
COL6A3P12111 AC073534.2-201ENST00000620377 381 ntBASIC-0.92□□□□□ -2.56
COL6A3P12111 RNA5SP26-201ENST00000362406 119 ntBASIC-0.92□□□□□ -2.56
COL6A3P12111 RNU6-1209P-201ENST00000363655 107 ntBASIC-0.92□□□□□ -2.56
COL6A3P12111 Y_RNA.242-201ENST00000364473 110 ntBASIC-0.92□□□□□ -2.56
COL6A3P12111 RNU6-1145P-201ENST00000384246 107 ntBASIC-0.92□□□□□ -2.56
COL6A3P12111 MIR1-2-201ENST00000384961 85 ntBASIC-0.92□□□□□ -2.56
COL6A3P12111 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.92□□□□□ -2.56
COL6A3P12111 MIR3941-201ENST00000582572 103 ntBASIC-0.92□□□□□ -2.56
COL6A3P12111 MIR4490-201ENST00000582647 84 ntBASIC-0.92□□□□□ -2.56
COL6A3P12111 AC124303.1-201ENST00000605703 360 ntBASIC-0.92□□□□□ -2.56
COL6A3P12111 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.92□□□□□ -2.56
COL6A3P12111 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.92□□□□□ -2.56
COL6A3P12111 RNU6-883P-201ENST00000384597 107 ntBASIC-0.92□□□□□ -2.56
COL6A3P12111 GPR143P-201ENST00000434155 205 ntBASIC-0.92□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms