Protein–RNA interactions for Protein: P11940

PABPC1, Polyadenylate-binding protein 1, humanhuman

Known RBP Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P11940 RNU6-476P-201ENST00000384726 107 ntBASIC1.87□□□□□ -2.11
PABPC1P11940 RPS3AP1-201ENST00000413190 320 ntBASIC1.87□□□□□ -2.11
PABPC1P11940 HMGN1P33-201ENST00000432945 451 ntBASIC1.87□□□□□ -2.11
PABPC1P11940 AC009474.2-201ENST00000451383 136 ntBASIC1.87□□□□□ -2.11
PABPC1P11940 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.87□□□□□ -2.11
PABPC1P11940 MTND5P34-201ENST00000568888 325 ntBASIC1.87□□□□□ -2.11
PABPC1P11940 MIR3122-201ENST00000577243 73 ntBASIC1.87□□□□□ -2.11
PABPC1P11940 MIR548AO-201ENST00000579992 96 ntBASIC1.87□□□□□ -2.11
PABPC1P11940 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
PABPC1P11940 AC084768.2-201ENST00000622736 221 ntBASIC1.87□□□□□ -2.11
PABPC1P11940 Z97988.1-201ENST00000637697 135 ntBASIC1.87□□□□□ -2.11
PABPC1P11940 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
PABPC1P11940 Y_RNA.354-201ENST00000365448 111 ntBASIC1.86□□□□□ -2.11
PABPC1P11940 RNU6-1144P-201ENST00000384247 104 ntBASIC1.86□□□□□ -2.11
PABPC1P11940 MIR934-201ENST00000401241 83 ntBASIC1.86□□□□□ -2.11
PABPC1P11940 AC245517.4-201ENST00000448601 281 ntBASIC1.86□□□□□ -2.11
PABPC1P11940 Y_RNA.649-201ENST00000459077 103 ntBASIC1.86□□□□□ -2.11
PABPC1P11940 RNA5SP445-201ENST00000515889 115 ntBASIC1.86□□□□□ -2.11
PABPC1P11940 CYP3A52P-201ENST00000563326 91 ntBASIC1.86□□□□□ -2.11
PABPC1P11940 MIR3664-201ENST00000579074 99 ntBASIC1.86□□□□□ -2.11
PABPC1P11940 MIR6841-201ENST00000637129 72 ntBASIC1.86□□□□□ -2.11
PABPC1P11940 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
PABPC1P11940 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.85□□□□□ -2.11
PABPC1P11940 RPS29P11-201ENST00000496507 171 ntBASIC1.85□□□□□ -2.11
PABPC1P11940 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.85□□□□□ -2.11
PABPC1P11940 AC004812.1-201ENST00000540773 146 ntBASIC1.85□□□□□ -2.11
PABPC1P11940 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
PABPC1P11940 Y_RNA.531-201ENST00000384589 121 ntBASIC1.84□□□□□ -2.11
PABPC1P11940 RNU7-113P-201ENST00000459273 62 ntBASIC1.84□□□□□ -2.11
PABPC1P11940 AL133373.1-201ENST00000497098 94 ntBASIC1.84□□□□□ -2.11
PABPC1P11940 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.84□□□□□ -2.11
PABPC1P11940 SNORA16.1-201ENST00000364597 132 ntBASIC1.83□□□□□ -2.12
PABPC1P11940 RPL31P63-201ENST00000422565 375 ntBASIC1.83□□□□□ -2.12
PABPC1P11940 AL512326.2-201ENST00000426359 151 ntBASIC1.83□□□□□ -2.12
PABPC1P11940 AL512310.8-201ENST00000550183 120 ntBASIC1.83□□□□□ -2.12
PABPC1P11940 RNU1-17P-201ENST00000363022 152 ntBASIC1.82□□□□□ -2.12
PABPC1P11940 Y_RNA.171-201ENST00000363760 102 ntBASIC1.82□□□□□ -2.12
PABPC1P11940 SNORD38B-201ENST00000384690 67 ntBASIC1.82□□□□□ -2.12
PABPC1P11940 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
PABPC1P11940 SNORA25.15-201ENST00000516487 89 ntBASIC1.82□□□□□ -2.12
PABPC1P11940 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.82□□□□□ -2.12
PABPC1P11940 MIR8081-201ENST00000611533 95 ntBASIC1.82□□□□□ -2.12
PABPC1P11940 SNORD38B-202ENST00000625943 69 ntBASIC1.82□□□□□ -2.12
PABPC1P11940 RNU6-1325P-201ENST00000364905 105 ntBASIC1.81□□□□□ -2.12
PABPC1P11940 Y_RNA.299-201ENST00000364973 94 ntBASIC1.81□□□□□ -2.12
PABPC1P11940 SNORD116-21-201ENST00000384507 92 ntBASIC1.81□□□□□ -2.12
PABPC1P11940 RNU6-1104P-201ENST00000384723 104 ntBASIC1.81□□□□□ -2.12
PABPC1P11940 MIR548A1-201ENST00000385041 97 ntBASIC1.81□□□□□ -2.12
PABPC1P11940 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.81□□□□□ -2.12
PABPC1P11940 AC245047.7-201ENST00000440265 293 ntBASIC1.81□□□□□ -2.12
PABPC1P11940 AC113410.1-201ENST00000505029 247 ntBASIC1.81□□□□□ -2.12
PABPC1P11940 RNU6-902P-201ENST00000517212 91 ntBASIC1.81□□□□□ -2.12
PABPC1P11940 AC022523.2-201ENST00000561045 150 ntBASIC1.81□□□□□ -2.12
PABPC1P11940 MIR3163-201ENST00000581592 73 ntBASIC1.81□□□□□ -2.12
PABPC1P11940 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.81□□□□□ -2.12
PABPC1P11940 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.81□□□□□ -2.12
PABPC1P11940 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.81□□□□□ -2.12
PABPC1P11940 SNORD115-2-201ENST00000362842 82 ntBASIC1.8□□□□□ -2.12
PABPC1P11940 SNORA25.3-201ENST00000363205 127 ntBASIC1.8□□□□□ -2.12
PABPC1P11940 RNY4P6-201ENST00000363667 96 ntBASIC1.8□□□□□ -2.12
PABPC1P11940 SNORD115-20-201ENST00000365099 82 ntBASIC1.8□□□□□ -2.12
PABPC1P11940 SNORD20-201ENST00000384550 80 ntBASIC1.8□□□□□ -2.12
PABPC1P11940 RNU6-602P-201ENST00000411155 105 ntBASIC1.8□□□□□ -2.12
PABPC1P11940 RPS27P16-201ENST00000425758 201 ntBASIC1.8□□□□□ -2.12
PABPC1P11940 RNU6-1258P-201ENST00000516911 111 ntBASIC1.8□□□□□ -2.12
PABPC1P11940 AC024614.2-201ENST00000577584 372 ntBASIC1.8□□□□□ -2.12
PABPC1P11940 MIR6129-201ENST00000616087 109 ntBASIC1.8□□□□□ -2.12
PABPC1P11940 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.8□□□□□ -2.12
PABPC1P11940 RNU6-215P-201ENST00000365169 102 ntBASIC1.79□□□□□ -2.12
PABPC1P11940 RNA5SP190-201ENST00000365222 118 ntBASIC1.79□□□□□ -2.12
PABPC1P11940 RNU6-396P-201ENST00000365369 105 ntBASIC1.79□□□□□ -2.12
PABPC1P11940 AC090844.1-201ENST00000422019 156 ntBASIC1.79□□□□□ -2.12
PABPC1P11940 snoU13.25-201ENST00000458945 104 ntBASIC1.79□□□□□ -2.12
PABPC1P11940 RPS23P4-201ENST00000487908 423 ntBASIC1.79□□□□□ -2.12
PABPC1P11940 RNA5SP33-201ENST00000516687 98 ntBASIC1.79□□□□□ -2.12
PABPC1P11940 RNU6-165P-201ENST00000517170 99 ntBASIC1.79□□□□□ -2.12
PABPC1P11940 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
PABPC1P11940 RNU6-880P-201ENST00000384526 107 ntBASIC1.78□□□□□ -2.12
PABPC1P11940 RNU6-429P-201ENST00000384582 108 ntBASIC1.78□□□□□ -2.12
PABPC1P11940 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.78□□□□□ -2.12
PABPC1P11940 RN7SKP88-201ENST00000516847 250 ntBASIC1.78□□□□□ -2.12
PABPC1P11940 AC007012.1-201ENST00000567192 175 ntBASIC1.78□□□□□ -2.12
PABPC1P11940 MIR4419B-201ENST00000577260 68 ntBASIC1.78□□□□□ -2.12
PABPC1P11940 PRELID3BP2-201ENST00000605362 201 ntBASIC1.78□□□□□ -2.12
PABPC1P11940 7SK.8-201ENST00000612110 250 ntBASIC1.78□□□□□ -2.12
PABPC1P11940 7SK.11-201ENST00000615477 250 ntBASIC1.78□□□□□ -2.12
PABPC1P11940 MIR8065-201ENST00000620577 100 ntBASIC1.78□□□□□ -2.12
PABPC1P11940 7SK.13-201ENST00000622040 250 ntBASIC1.78□□□□□ -2.12
PABPC1P11940 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.78□□□□□ -2.12
PABPC1P11940 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
PABPC1P11940 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.77□□□□□ -2.13
PABPC1P11940 RNA5SP264-201ENST00000363115 107 ntBASIC1.77□□□□□ -2.13
PABPC1P11940 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.77□□□□□ -2.13
PABPC1P11940 SNORD13-201ENST00000459299 104 ntBASIC1.77□□□□□ -2.13
PABPC1P11940 MIR2115-201ENST00000516657 100 ntBASIC1.77□□□□□ -2.13
PABPC1P11940 RNU11-2P-201ENST00000516898 142 ntBASIC1.77□□□□□ -2.13
PABPC1P11940 AP003716.2-201ENST00000528260 108 ntBASIC1.77□□□□□ -2.13
PABPC1P11940 AP000942.3-201ENST00000603702 160 ntBASIC1.77□□□□□ -2.13
PABPC1P11940 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.77□□□□□ -2.13
PABPC1P11940 MIR103A2-201ENST00000362154 78 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms