Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 Y_RNA.31-201ENST00000362574 102 ntBASIC0□□□□□ -2.41
CD28P10747 Y_RNA.91-201ENST00000363042 107 ntBASIC0□□□□□ -2.41
CD28P10747 SNORD114-9-201ENST00000364370 72 ntBASIC0□□□□□ -2.41
CD28P10747 RNU4-10P-201ENST00000364383 140 ntBASIC0□□□□□ -2.41
CD28P10747 Y_RNA.394-201ENST00000383942 103 ntBASIC0□□□□□ -2.41
CD28P10747 RNU6-514P-201ENST00000384208 107 ntBASIC0□□□□□ -2.41
CD28P10747 MT-TD-201ENST00000387419 68 ntBASIC0□□□□□ -2.41
CD28P10747 Y_RNA.588-201ENST00000391254 102 ntBASIC0□□□□□ -2.41
CD28P10747 RNU4-83P-201ENST00000410863 133 ntBASIC0□□□□□ -2.41
CD28P10747 RNU6-1299P-201ENST00000516316 100 ntBASIC0□□□□□ -2.41
CD28P10747 RNU6-135P-201ENST00000516769 101 ntBASIC0□□□□□ -2.41
CD28P10747 RNA5SP268-201ENST00000516828 124 ntBASIC0□□□□□ -2.41
CD28P10747 MIR4667-201ENST00000578933 66 ntBASIC0□□□□□ -2.41
CD28P10747 MIR6755-201ENST00000619993 66 ntBASIC0□□□□□ -2.41
CD28P10747 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.01□□□□□ -2.41
CD28P10747 Y_RNA.214-201ENST00000364201 112 ntBASIC-0.01□□□□□ -2.41
CD28P10747 RNU6-450P-201ENST00000364654 107 ntBASIC-0.01□□□□□ -2.41
CD28P10747 SNORD93-201ENST00000408813 74 ntBASIC-0.01□□□□□ -2.41
CD28P10747 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.01□□□□□ -2.41
CD28P10747 ELOCP20-201ENST00000422460 345 ntBASIC-0.01□□□□□ -2.41
CD28P10747 RNA5SP285-201ENST00000516619 119 ntBASIC-0.01□□□□□ -2.41
CD28P10747 AC006006.1-201ENST00000603082 144 ntBASIC-0.01□□□□□ -2.41
CD28P10747 MIR7107-201ENST00000611489 80 ntBASIC-0.01□□□□□ -2.41
CD28P10747 MIR6082-201ENST00000613604 109 ntBASIC-0.01□□□□□ -2.41
CD28P10747 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-0.01□□□□□ -2.41
CD28P10747 MIR376A2-201ENST00000636782 80 ntBASIC-0.01□□□□□ -2.41
CD28P10747 MIR6841-201ENST00000637129 72 ntBASIC-0.01□□□□□ -2.41
CD28P10747 MIR369-201ENST00000362155 70 ntBASIC-0.02□□□□□ -2.41
CD28P10747 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.02□□□□□ -2.41
CD28P10747 Y_RNA.24-201ENST00000362508 103 ntBASIC-0.02□□□□□ -2.41
CD28P10747 Y_RNA.28-201ENST00000362554 111 ntBASIC-0.02□□□□□ -2.41
CD28P10747 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.02□□□□□ -2.41
CD28P10747 RNU6-770P-201ENST00000363929 105 ntBASIC-0.02□□□□□ -2.41
CD28P10747 RNU6-211P-201ENST00000384047 107 ntBASIC-0.02□□□□□ -2.41
CD28P10747 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.02□□□□□ -2.41
CD28P10747 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.02□□□□□ -2.41
CD28P10747 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.02□□□□□ -2.41
CD28P10747 MIR215-201ENST00000384858 110 ntBASIC-0.02□□□□□ -2.41
CD28P10747 MIR644A-201ENST00000385262 94 ntBASIC-0.02□□□□□ -2.41
CD28P10747 U8.15-201ENST00000390947 134 ntBASIC-0.02□□□□□ -2.41
CD28P10747 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.02□□□□□ -2.41
CD28P10747 RNU6-101P-201ENST00000410323 104 ntBASIC-0.02□□□□□ -2.41
CD28P10747 RPL21P38-201ENST00000418090 167 ntBASIC-0.02□□□□□ -2.41
CD28P10747 RNU6-469P-201ENST00000516253 101 ntBASIC-0.02□□□□□ -2.41
CD28P10747 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.02□□□□□ -2.41
CD28P10747 RNA5SP47-201ENST00000517230 109 ntBASIC-0.02□□□□□ -2.41
CD28P10747 MIR548S-201ENST00000581352 82 ntBASIC-0.02□□□□□ -2.41
CD28P10747 MIR5197-201ENST00000583721 112 ntBASIC-0.02□□□□□ -2.41
CD28P10747 MIR4290-201ENST00000583807 95 ntBASIC-0.02□□□□□ -2.41
CD28P10747 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.03□□□□□ -2.41
CD28P10747 MIR411-201ENST00000362239 96 ntBASIC-0.03□□□□□ -2.41
CD28P10747 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.03□□□□□ -2.41
CD28P10747 SNORD114-16-201ENST00000363044 70 ntBASIC-0.03□□□□□ -2.41
CD28P10747 Y_RNA.275-201ENST00000364726 110 ntBASIC-0.03□□□□□ -2.41
CD28P10747 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.03□□□□□ -2.41
CD28P10747 Y_RNA.431-201ENST00000384086 102 ntBASIC-0.03□□□□□ -2.41
CD28P10747 SNORA1-201ENST00000384107 130 ntBASIC-0.03□□□□□ -2.41
CD28P10747 RNY3P14-201ENST00000384309 102 ntBASIC-0.03□□□□□ -2.41
CD28P10747 SNRPGP8-201ENST00000454064 226 ntBASIC-0.03□□□□□ -2.41
CD28P10747 TRBVB-201ENST00000477100 408 ntBASIC-0.03□□□□□ -2.41
CD28P10747 SNORA40.15-201ENST00000516884 107 ntBASIC-0.03□□□□□ -2.41
CD28P10747 MIR4305-201ENST00000583252 102 ntBASIC-0.03□□□□□ -2.41
CD28P10747 MIR371B-201ENST00000638082 66 ntBASIC-0.03□□□□□ -2.41
CD28P10747 SNORA9.1-201ENST00000362412 131 ntBASIC-0.04□□□□□ -2.42
CD28P10747 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.04□□□□□ -2.42
CD28P10747 RNA5SP214-201ENST00000363378 118 ntBASIC-0.04□□□□□ -2.42
CD28P10747 Y_RNA.304-201ENST00000365011 112 ntBASIC-0.04□□□□□ -2.42
CD28P10747 RNU6-597P-201ENST00000365620 102 ntBASIC-0.04□□□□□ -2.42
CD28P10747 Y_RNA.389-201ENST00000383924 113 ntBASIC-0.04□□□□□ -2.42
CD28P10747 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.04□□□□□ -2.42
CD28P10747 SEPT7P4-201ENST00000437076 306 ntBASIC-0.04□□□□□ -2.42
CD28P10747 SNORD2.1-201ENST00000458762 69 ntBASIC-0.04□□□□□ -2.42
CD28P10747 RNU7-45P-201ENST00000459460 63 ntBASIC-0.04□□□□□ -2.42
CD28P10747 RNU7-80P-201ENST00000459562 61 ntBASIC-0.04□□□□□ -2.42
CD28P10747 SERF1AP1-201ENST00000514575 187 ntBASIC-0.04□□□□□ -2.42
CD28P10747 SNORA31.14-201ENST00000516728 116 ntBASIC-0.04□□□□□ -2.42
CD28P10747 AC141846.1-201ENST00000568348 142 ntBASIC-0.04□□□□□ -2.42
CD28P10747 AC091932.4-201ENST00000623386 200 ntBASIC-0.04□□□□□ -2.42
CD28P10747 MIR302B-201ENST00000362188 73 ntBASIC-0.05□□□□□ -2.42
CD28P10747 Y_RNA.16-201ENST00000362421 102 ntBASIC-0.05□□□□□ -2.42
CD28P10747 Y_RNA.19-201ENST00000362462 99 ntBASIC-0.05□□□□□ -2.42
CD28P10747 Y_RNA.152-201ENST00000363578 100 ntBASIC-0.05□□□□□ -2.42
CD28P10747 Y_RNA.351-201ENST00000365436 96 ntBASIC-0.05□□□□□ -2.42
CD28P10747 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.05□□□□□ -2.42
CD28P10747 RNU6-949P-201ENST00000384040 107 ntBASIC-0.05□□□□□ -2.42
CD28P10747 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.05□□□□□ -2.42
CD28P10747 SNORD28-201ENST00000384706 75 ntBASIC-0.05□□□□□ -2.42
CD28P10747 MIR329-2-201ENST00000385029 84 ntBASIC-0.05□□□□□ -2.42
CD28P10747 MIR616-201ENST00000385293 97 ntBASIC-0.05□□□□□ -2.42
CD28P10747 AC069271.1-201ENST00000445577 156 ntBASIC-0.05□□□□□ -2.42
CD28P10747 AC082651.2-201ENST00000496833 166 ntBASIC-0.05□□□□□ -2.42
CD28P10747 RNU6-1143P-201ENST00000516125 104 ntBASIC-0.05□□□□□ -2.42
CD28P10747 RNA5SP227-201ENST00000516184 113 ntBASIC-0.05□□□□□ -2.42
CD28P10747 MIR4491-201ENST00000581087 68 ntBASIC-0.05□□□□□ -2.42
CD28P10747 MIR4639-201ENST00000584938 69 ntBASIC-0.05□□□□□ -2.42
CD28P10747 AL365205.2-201ENST00000594586 68 ntBASIC-0.05□□□□□ -2.42
CD28P10747 Y_RNA.26-201ENST00000362539 101 ntBASIC-0.06□□□□□ -2.42
CD28P10747 Y_RNA.84-201ENST00000363011 104 ntBASIC-0.06□□□□□ -2.42
CD28P10747 RNU6-806P-201ENST00000365147 105 ntBASIC-0.06□□□□□ -2.42
CD28P10747 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.06□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms