Protein–RNA interactions for Protein: P0CW20

LIMS4, LIM and senescent cell antigen-like-containing domain protein 4, humanhuman

Predictions only

Length 117 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4P0CW20 SNORA18-201ENST00000384416 132 ntBASIC-0.83□□□□□ -2.54
LIMS4P0CW20 MIR1912-201ENST00000410389 80 ntBASIC-0.83□□□□□ -2.54
LIMS4P0CW20 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.83□□□□□ -2.54
LIMS4P0CW20 MTND1P14-201ENST00000427400 950 ntBASIC-0.83□□□□□ -2.54
LIMS4P0CW20 RNU6-764P-201ENST00000516396 105 ntBASIC-0.83□□□□□ -2.54
LIMS4P0CW20 Y_RNA.691-201ENST00000516611 103 ntBASIC-0.83□□□□□ -2.54
LIMS4P0CW20 RPS29P30-201ENST00000600975 111 ntBASIC-0.83□□□□□ -2.54
LIMS4P0CW20 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-0.83□□□□□ -2.54
LIMS4P0CW20 AL391099.1-201ENST00000624635 187 ntBASIC-0.83□□□□□ -2.54
LIMS4P0CW20 MIR4272-201ENST00000635924 64 ntBASIC-0.83□□□□□ -2.54
LIMS4P0CW20 SNORA22.1-201ENST00000362701 134 ntBASIC-0.84□□□□□ -2.54
LIMS4P0CW20 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.84□□□□□ -2.54
LIMS4P0CW20 Y_RNA.286-201ENST00000364813 102 ntBASIC-0.84□□□□□ -2.54
LIMS4P0CW20 MIR559-201ENST00000385188 96 ntBASIC-0.84□□□□□ -2.54
LIMS4P0CW20 SNORD110-201ENST00000408189 75 ntBASIC-0.84□□□□□ -2.54
LIMS4P0CW20 AC006210.1-201ENST00000424882 111 ntBASIC-0.84□□□□□ -2.54
LIMS4P0CW20 MTND1P34-201ENST00000438556 671 ntBASIC-0.84□□□□□ -2.54
LIMS4P0CW20 MTND4P17-201ENST00000470444 350 ntBASIC-0.84□□□□□ -2.54
LIMS4P0CW20 MIR5692C2-201ENST00000577959 77 ntBASIC-0.84□□□□□ -2.54
LIMS4P0CW20 C8orf59P2-201ENST00000603441 271 ntBASIC-0.84□□□□□ -2.54
LIMS4P0CW20 AC091932.4-201ENST00000623386 200 ntBASIC-0.84□□□□□ -2.54
LIMS4P0CW20 RNU4-73P-201ENST00000363164 141 ntBASIC-0.85□□□□□ -2.55
LIMS4P0CW20 Y_RNA.143-201ENST00000363520 106 ntBASIC-0.85□□□□□ -2.55
LIMS4P0CW20 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.85□□□□□ -2.55
LIMS4P0CW20 Y_RNA.653-201ENST00000459091 95 ntBASIC-0.85□□□□□ -2.55
LIMS4P0CW20 Y_RNA.637-201ENST00000459424 114 ntBASIC-0.85□□□□□ -2.55
LIMS4P0CW20 U8.20-201ENST00000459445 131 ntBASIC-0.85□□□□□ -2.55
LIMS4P0CW20 AC114755.3-201ENST00000481111 251 ntBASIC-0.85□□□□□ -2.55
LIMS4P0CW20 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.85□□□□□ -2.55
LIMS4P0CW20 AC022079.1-201ENST00000621546 602 ntBASIC-0.85□□□□□ -2.55
LIMS4P0CW20 RNA5SP133-201ENST00000363368 119 ntBASIC-0.86□□□□□ -2.55
LIMS4P0CW20 RNA5SP403-201ENST00000363598 108 ntBASIC-0.86□□□□□ -2.55
LIMS4P0CW20 Y_RNA.222-201ENST00000364264 102 ntBASIC-0.86□□□□□ -2.55
LIMS4P0CW20 Y_RNA.293-201ENST00000364908 93 ntBASIC-0.86□□□□□ -2.55
LIMS4P0CW20 Y_RNA.418-201ENST00000384029 102 ntBASIC-0.86□□□□□ -2.55
LIMS4P0CW20 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.86□□□□□ -2.55
LIMS4P0CW20 MIR604-201ENST00000384880 94 ntBASIC-0.86□□□□□ -2.55
LIMS4P0CW20 AC244250.2-201ENST00000418731 148 ntBASIC-0.86□□□□□ -2.55
LIMS4P0CW20 RNU6-699P-201ENST00000517081 110 ntBASIC-0.86□□□□□ -2.55
LIMS4P0CW20 MIR4432-201ENST00000581823 84 ntBASIC-0.86□□□□□ -2.55
LIMS4P0CW20 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.86□□□□□ -2.55
LIMS4P0CW20 AC002553.4-201ENST00000616896 331 ntBASIC-0.86□□□□□ -2.55
LIMS4P0CW20 AL138825.1-201ENST00000618587 192 ntBASIC-0.86□□□□□ -2.55
LIMS4P0CW20 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.86□□□□□ -2.55
LIMS4P0CW20 Y_RNA.136-201ENST00000363444 102 ntBASIC-0.87□□□□□ -2.55
LIMS4P0CW20 SNORD114-11-201ENST00000363738 75 ntBASIC-0.87□□□□□ -2.55
LIMS4P0CW20 RNU4-84P-201ENST00000364200 139 ntBASIC-0.87□□□□□ -2.55
LIMS4P0CW20 MIR224-201ENST00000384889 81 ntBASIC-0.87□□□□□ -2.55
LIMS4P0CW20 MIR626-201ENST00000385032 94 ntBASIC-0.87□□□□□ -2.55
LIMS4P0CW20 MIR526A2-201ENST00000390198 65 ntBASIC-0.87□□□□□ -2.55
LIMS4P0CW20 MIR1277-201ENST00000408536 78 ntBASIC-0.87□□□□□ -2.55
LIMS4P0CW20 MTATP6P26-201ENST00000445926 662 ntBASIC-0.87□□□□□ -2.55
LIMS4P0CW20 SNORA25.13-201ENST00000516395 103 ntBASIC-0.87□□□□□ -2.55
LIMS4P0CW20 MIR5688-201ENST00000580619 83 ntBASIC-0.87□□□□□ -2.55
LIMS4P0CW20 RNU6-509P-201ENST00000363519 107 ntBASIC-0.88□□□□□ -2.55
LIMS4P0CW20 Y_RNA.813-201ENST00000364639 102 ntBASIC-0.88□□□□□ -2.55
LIMS4P0CW20 Y_RNA.428-201ENST00000384078 102 ntBASIC-0.88□□□□□ -2.55
LIMS4P0CW20 RNU2-55P-201ENST00000411146 174 ntBASIC-0.88□□□□□ -2.55
LIMS4P0CW20 MRPS35P2-201ENST00000508242 191 ntBASIC-0.88□□□□□ -2.55
LIMS4P0CW20 RNU6-1299P-201ENST00000516316 100 ntBASIC-0.88□□□□□ -2.55
LIMS4P0CW20 MIR4636-201ENST00000582271 80 ntBASIC-0.88□□□□□ -2.55
LIMS4P0CW20 AC021613.1-201ENST00000623880 111 ntBASIC-0.88□□□□□ -2.55
LIMS4P0CW20 MIR655-201ENST00000362159 97 ntBASIC-0.89□□□□□ -2.55
LIMS4P0CW20 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.89□□□□□ -2.55
LIMS4P0CW20 Y_RNA.634-201ENST00000364811 113 ntBASIC-0.89□□□□□ -2.55
LIMS4P0CW20 RNU6-480P-201ENST00000384332 107 ntBASIC-0.89□□□□□ -2.55
LIMS4P0CW20 MIR516B1-201ENST00000385211 90 ntBASIC-0.89□□□□□ -2.55
LIMS4P0CW20 BX276092.1-201ENST00000427368 251 ntBASIC-0.89□□□□□ -2.55
LIMS4P0CW20 RNU6-893P-201ENST00000458841 100 ntBASIC-0.89□□□□□ -2.55
LIMS4P0CW20 NAMPTP3-201ENST00000569273 224 ntBASIC-0.89□□□□□ -2.55
LIMS4P0CW20 AL356055.1-201ENST00000602528 446 ntBASIC-0.89□□□□□ -2.55
LIMS4P0CW20 AC025253.1-201ENST00000613623 543 ntBASIC-0.89□□□□□ -2.55
LIMS4P0CW20 MIR6507-201ENST00000613630 70 ntBASIC-0.89□□□□□ -2.55
LIMS4P0CW20 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.9□□□□□ -2.55
LIMS4P0CW20 Y_RNA.304-201ENST00000365011 112 ntBASIC-0.9□□□□□ -2.55
LIMS4P0CW20 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.9□□□□□ -2.55
LIMS4P0CW20 RNU6-735P-201ENST00000410612 107 ntBASIC-0.9□□□□□ -2.55
LIMS4P0CW20 RNA5SP153-201ENST00000516498 76 ntBASIC-0.9□□□□□ -2.55
LIMS4P0CW20 SNORD116.3-201ENST00000517176 78 ntBASIC-0.9□□□□□ -2.55
LIMS4P0CW20 MIR7111-201ENST00000619751 72 ntBASIC-0.9□□□□□ -2.55
LIMS4P0CW20 U6.109-201ENST00000636749 87 ntBASIC-0.9□□□□□ -2.55
LIMS4P0CW20 RNA5SP205-201ENST00000364653 136 ntBASIC-0.91□□□□□ -2.56
LIMS4P0CW20 Y_RNA.424-201ENST00000384063 103 ntBASIC-0.91□□□□□ -2.56
LIMS4P0CW20 Y_RNA.526-201ENST00000384572 110 ntBASIC-0.91□□□□□ -2.56
LIMS4P0CW20 RNU4-70P-201ENST00000384579 139 ntBASIC-0.91□□□□□ -2.56
LIMS4P0CW20 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-0.91□□□□□ -2.56
LIMS4P0CW20 RNU7-79P-201ENST00000516082 62 ntBASIC-0.91□□□□□ -2.56
LIMS4P0CW20 MIR548H5-201ENST00000580314 60 ntBASIC-0.91□□□□□ -2.56
LIMS4P0CW20 MIR5197-201ENST00000583721 112 ntBASIC-0.91□□□□□ -2.56
LIMS4P0CW20 AL590491.3-201ENST00000610731 82 ntBASIC-0.91□□□□□ -2.56
LIMS4P0CW20 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.91□□□□□ -2.56
LIMS4P0CW20 AC007485.1-201ENST00000616755 206 ntBASIC-0.91□□□□□ -2.56
LIMS4P0CW20 AC105081.1-201ENST00000617727 106 ntBASIC-0.91□□□□□ -2.56
LIMS4P0CW20 MIR376A2-201ENST00000636782 80 ntBASIC-0.91□□□□□ -2.56
LIMS4P0CW20 RNU6-1272P-201ENST00000362776 107 ntBASIC-0.92□□□□□ -2.56
LIMS4P0CW20 Y_RNA.166-201ENST00000363730 102 ntBASIC-0.92□□□□□ -2.56
LIMS4P0CW20 RNU4-24P-201ENST00000364565 139 ntBASIC-0.92□□□□□ -2.56
LIMS4P0CW20 PMCHL1-202ENST00000423102 261 ntBASIC-0.92□□□□□ -2.56
LIMS4P0CW20 NDUFAF4P4-201ENST00000454883 502 ntBASIC-0.92□□□□□ -2.56
LIMS4P0CW20 SNORA40.14-201ENST00000516543 86 ntBASIC-0.92□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 328.9 ms