Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 MIR588-201ENST00000384900 83 ntBASIC0.44□□□□□ -2.34
MRPL3P09001 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
MRPL3P09001 RNU1-119P-201ENST00000391122 165 ntBASIC0.44□□□□□ -2.34
MRPL3P09001 AL121914.1-201ENST00000450188 156 ntBASIC0.44□□□□□ -2.34
MRPL3P09001 RNU6-1053P-201ENST00000515930 101 ntBASIC0.44□□□□□ -2.34
MRPL3P09001 RNU6-1023P-201ENST00000516137 106 ntBASIC0.44□□□□□ -2.34
MRPL3P09001 SCARNA15-202ENST00000516881 127 ntBASIC0.44□□□□□ -2.34
MRPL3P09001 MIR4804-201ENST00000581683 73 ntBASIC0.44□□□□□ -2.34
MRPL3P09001 MIR4676-201ENST00000583078 72 ntBASIC0.44□□□□□ -2.34
MRPL3P09001 U4.1-201ENST00000620349 87 ntBASIC0.44□□□□□ -2.34
MRPL3P09001 AC091932.4-201ENST00000623386 200 ntBASIC0.44□□□□□ -2.34
MRPL3P09001 MIR30D-201ENST00000362283 70 ntBASIC0.43□□□□□ -2.34
MRPL3P09001 RNY1-201ENST00000364228 113 ntBASIC0.43□□□□□ -2.34
MRPL3P09001 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
MRPL3P09001 RNU6-1292P-201ENST00000383856 107 ntBASIC0.43□□□□□ -2.34
MRPL3P09001 RNU6-1336P-201ENST00000383886 109 ntBASIC0.43□□□□□ -2.34
MRPL3P09001 RNU6-945P-201ENST00000383947 107 ntBASIC0.43□□□□□ -2.34
MRPL3P09001 RNU6-918P-201ENST00000391219 106 ntBASIC0.43□□□□□ -2.34
MRPL3P09001 MIR1302-3-201ENST00000408128 138 ntBASIC0.43□□□□□ -2.34
MRPL3P09001 RNU6-1165P-201ENST00000410119 107 ntBASIC0.43□□□□□ -2.34
MRPL3P09001 SEPT7P4-201ENST00000437076 306 ntBASIC0.43□□□□□ -2.34
MRPL3P09001 RNU7-56P-201ENST00000458744 62 ntBASIC0.43□□□□□ -2.34
MRPL3P09001 MRPS18CP4-201ENST00000535821 231 ntBASIC0.43□□□□□ -2.34
MRPL3P09001 MIR378D2-201ENST00000580636 98 ntBASIC0.43□□□□□ -2.34
MRPL3P09001 MIR4714-201ENST00000580728 77 ntBASIC0.43□□□□□ -2.34
MRPL3P09001 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.43□□□□□ -2.34
MRPL3P09001 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.43□□□□□ -2.34
MRPL3P09001 U6.106-201ENST00000636360 105 ntBASIC0.43□□□□□ -2.34
MRPL3P09001 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
MRPL3P09001 SNORD18A-201ENST00000363753 72 ntBASIC0.42□□□□□ -2.34
MRPL3P09001 Y_RNA.182-201ENST00000363880 111 ntBASIC0.42□□□□□ -2.34
MRPL3P09001 RNA5SP499-201ENST00000363982 119 ntBASIC0.42□□□□□ -2.34
MRPL3P09001 RNU6-702P-201ENST00000364982 107 ntBASIC0.42□□□□□ -2.34
MRPL3P09001 RNU6-47P-201ENST00000383866 107 ntBASIC0.42□□□□□ -2.34
MRPL3P09001 Y_RNA.412-201ENST00000384001 104 ntBASIC0.42□□□□□ -2.34
MRPL3P09001 RNU6-643P-201ENST00000384018 107 ntBASIC0.42□□□□□ -2.34
MRPL3P09001 Y_RNA.452-201ENST00000384202 108 ntBASIC0.42□□□□□ -2.34
MRPL3P09001 MIR520F-201ENST00000384824 87 ntBASIC0.42□□□□□ -2.34
MRPL3P09001 MIR520E-201ENST00000384867 87 ntBASIC0.42□□□□□ -2.34
MRPL3P09001 MIR520H-201ENST00000385126 88 ntBASIC0.42□□□□□ -2.34
MRPL3P09001 Y_RNA.618-201ENST00000410949 107 ntBASIC0.42□□□□□ -2.34
MRPL3P09001 Y_RNA.797-201ENST00000515977 94 ntBASIC0.42□□□□□ -2.34
MRPL3P09001 RNU6-977P-201ENST00000516411 103 ntBASIC0.42□□□□□ -2.34
MRPL3P09001 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.42□□□□□ -2.34
MRPL3P09001 MIR3149-201ENST00000584629 83 ntBASIC0.42□□□□□ -2.34
MRPL3P09001 AC008608.1-201ENST00000603910 127 ntBASIC0.42□□□□□ -2.34
MRPL3P09001 AL136317.1-201ENST00000612653 226 ntBASIC0.42□□□□□ -2.34
MRPL3P09001 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.41□□□□□ -2.34
MRPL3P09001 Y_RNA.121-201ENST00000363309 113 ntBASIC0.41□□□□□ -2.34
MRPL3P09001 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
MRPL3P09001 RNU6-196P-201ENST00000384315 107 ntBASIC0.41□□□□□ -2.34
MRPL3P09001 MIR573-201ENST00000384964 99 ntBASIC0.41□□□□□ -2.34
MRPL3P09001 RNU4-71P-201ENST00000516258 113 ntBASIC0.41□□□□□ -2.34
MRPL3P09001 SNORD116-25-201ENST00000516517 92 ntBASIC0.41□□□□□ -2.34
MRPL3P09001 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.41□□□□□ -2.34
MRPL3P09001 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.41□□□□□ -2.34
MRPL3P09001 MIR6841-201ENST00000637129 72 ntBASIC0.41□□□□□ -2.34
MRPL3P09001 AL596211.1-201ENST00000569873 2277 ntBASIC0.41□□□□□ -2.34
MRPL3P09001 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.4□□□□□ -2.34
MRPL3P09001 MIR337-201ENST00000362281 93 ntBASIC0.4□□□□□ -2.35
MRPL3P09001 SNORA20.1-201ENST00000364790 130 ntBASIC0.4□□□□□ -2.35
MRPL3P09001 RNU6-275P-201ENST00000364910 107 ntBASIC0.4□□□□□ -2.35
MRPL3P09001 RNU6-463P-201ENST00000384340 107 ntBASIC0.4□□□□□ -2.35
MRPL3P09001 Y_RNA.478-201ENST00000384358 107 ntBASIC0.4□□□□□ -2.35
MRPL3P09001 RNU6-1319P-201ENST00000390855 104 ntBASIC0.4□□□□□ -2.35
MRPL3P09001 RNU6-747P-201ENST00000390928 104 ntBASIC0.4□□□□□ -2.35
MRPL3P09001 RNU6-241P-201ENST00000391148 104 ntBASIC0.4□□□□□ -2.35
MRPL3P09001 SNORA79-201ENST00000408376 140 ntBASIC0.4□□□□□ -2.35
MRPL3P09001 RNA5SP222-201ENST00000411039 105 ntBASIC0.4□□□□□ -2.35
MRPL3P09001 RNU6-177P-201ENST00000411257 104 ntBASIC0.4□□□□□ -2.35
MRPL3P09001 MIR18B-201ENST00000454574 71 ntBASIC0.4□□□□□ -2.35
MRPL3P09001 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.4□□□□□ -2.35
MRPL3P09001 RNU7-185P-201ENST00000459215 60 ntBASIC0.4□□□□□ -2.35
MRPL3P09001 RNU6-229P-201ENST00000516614 102 ntBASIC0.4□□□□□ -2.35
MRPL3P09001 RNU6-1258P-201ENST00000516911 111 ntBASIC0.4□□□□□ -2.35
MRPL3P09001 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.4□□□□□ -2.35
MRPL3P09001 MTND5P32-201ENST00000560711 1802 ntBASIC0.39□□□□□ -2.35
MRPL3P09001 MIR302B-201ENST00000362188 73 ntBASIC0.39□□□□□ -2.35
MRPL3P09001 MIR411-201ENST00000362239 96 ntBASIC0.39□□□□□ -2.35
MRPL3P09001 Y_RNA.75-201ENST00000362927 97 ntBASIC0.39□□□□□ -2.35
MRPL3P09001 Y_RNA.430-201ENST00000384081 110 ntBASIC0.39□□□□□ -2.35
MRPL3P09001 RNU4-70P-201ENST00000384579 139 ntBASIC0.39□□□□□ -2.35
MRPL3P09001 MIR125B2-201ENST00000385128 89 ntBASIC0.39□□□□□ -2.35
MRPL3P09001 MIR624-201ENST00000385217 97 ntBASIC0.39□□□□□ -2.35
MRPL3P09001 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
MRPL3P09001 AC096949.1-201ENST00000412047 152 ntBASIC0.39□□□□□ -2.35
MRPL3P09001 RNU7-80P-201ENST00000459562 61 ntBASIC0.39□□□□□ -2.35
MRPL3P09001 RPS29P1-201ENST00000465274 159 ntBASIC0.39□□□□□ -2.35
MRPL3P09001 RNU6-1149P-201ENST00000516810 97 ntBASIC0.39□□□□□ -2.35
MRPL3P09001 AC022559.1-201ENST00000520905 205 ntBASIC0.39□□□□□ -2.35
MRPL3P09001 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.39□□□□□ -2.35
MRPL3P09001 AC130289.1-201ENST00000577321 73 ntBASIC0.39□□□□□ -2.35
MRPL3P09001 MIR18A-201ENST00000362310 71 ntBASIC0.38□□□□□ -2.35
MRPL3P09001 Y_RNA.144-201ENST00000363521 113 ntBASIC0.38□□□□□ -2.35
MRPL3P09001 RNU4-16P-201ENST00000364737 141 ntBASIC0.38□□□□□ -2.35
MRPL3P09001 MIR938-201ENST00000401216 83 ntBASIC0.38□□□□□ -2.35
MRPL3P09001 AL078595.1-201ENST00000404458 226 ntBASIC0.38□□□□□ -2.35
MRPL3P09001 RNA5SP127-201ENST00000411051 133 ntBASIC0.38□□□□□ -2.35
MRPL3P09001 AC114737.2-201ENST00000421583 173 ntBASIC0.38□□□□□ -2.35
MRPL3P09001 AC098934.3-201ENST00000430450 190 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms