Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 RNU6-679P-201ENST00000391003 106 ntBASIC0.43□□□□□ -2.34
VIMP08670 SNORD100-201ENST00000408573 76 ntBASIC0.43□□□□□ -2.34
VIMP08670 RNA5SP261-201ENST00000410536 106 ntBASIC0.43□□□□□ -2.34
VIMP08670 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.43□□□□□ -2.34
VIMP08670 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.43□□□□□ -2.34
VIMP08670 AC002350.1-201ENST00000490759 375 ntBASIC0.43□□□□□ -2.34
VIMP08670 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
VIMP08670 AC008737.2-201ENST00000599446 118 ntBASIC0.43□□□□□ -2.34
VIMP08670 AC011921.3-201ENST00000605540 361 ntBASIC0.43□□□□□ -2.34
VIMP08670 AL596211.1-201ENST00000569873 2277 ntBASIC0.43□□□□□ -2.34
VIMP08670 SNORA63-201ENST00000363450 132 ntBASIC0.42□□□□□ -2.34
VIMP08670 RNU6-103P-201ENST00000363686 107 ntBASIC0.42□□□□□ -2.34
VIMP08670 Y_RNA.292-201ENST00000364904 97 ntBASIC0.42□□□□□ -2.34
VIMP08670 RNU6-597P-201ENST00000365620 102 ntBASIC0.42□□□□□ -2.34
VIMP08670 RNU6-1292P-201ENST00000383856 107 ntBASIC0.42□□□□□ -2.34
VIMP08670 Y_RNA.454-201ENST00000384224 113 ntBASIC0.42□□□□□ -2.34
VIMP08670 RNU4-43P-201ENST00000410628 137 ntBASIC0.42□□□□□ -2.34
VIMP08670 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.42□□□□□ -2.34
VIMP08670 SEPT7P4-201ENST00000437076 306 ntBASIC0.42□□□□□ -2.34
VIMP08670 AL117187.1-201ENST00000555482 181 ntBASIC0.42□□□□□ -2.34
VIMP08670 AL365205.2-201ENST00000594586 68 ntBASIC0.42□□□□□ -2.34
VIMP08670 Y_RNA.145-201ENST00000363527 102 ntBASIC0.41□□□□□ -2.34
VIMP08670 RNU2-38P-201ENST00000410856 79 ntBASIC0.41□□□□□ -2.34
VIMP08670 AL121914.1-201ENST00000450188 156 ntBASIC0.41□□□□□ -2.34
VIMP08670 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.41□□□□□ -2.34
VIMP08670 Y_RNA.812-201ENST00000610788 101 ntBASIC0.41□□□□□ -2.34
VIMP08670 Y_RNA.784-201ENST00000613803 101 ntBASIC0.41□□□□□ -2.34
VIMP08670 Y_RNA.787-201ENST00000616522 101 ntBASIC0.41□□□□□ -2.34
VIMP08670 Y_RNA.780-201ENST00000617336 101 ntBASIC0.41□□□□□ -2.34
VIMP08670 Y_RNA.801-201ENST00000619005 101 ntBASIC0.41□□□□□ -2.34
VIMP08670 AC092634.7-201ENST00000621022 103 ntBASIC0.41□□□□□ -2.34
VIMP08670 Y_RNA.47-201ENST00000362697 108 ntBASIC0.4□□□□□ -2.35
VIMP08670 SNORA25.9-201ENST00000365087 128 ntBASIC0.4□□□□□ -2.35
VIMP08670 RNU6-342P-201ENST00000384521 104 ntBASIC0.4□□□□□ -2.35
VIMP08670 MIR1276-201ENST00000408707 83 ntBASIC0.4□□□□□ -2.35
VIMP08670 SNORD93-201ENST00000408813 74 ntBASIC0.4□□□□□ -2.35
VIMP08670 RNA5SP237-201ENST00000410414 113 ntBASIC0.4□□□□□ -2.35
VIMP08670 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.4□□□□□ -2.35
VIMP08670 RNY3P16-201ENST00000516338 101 ntBASIC0.4□□□□□ -2.35
VIMP08670 MIR4744-201ENST00000581563 82 ntBASIC0.4□□□□□ -2.35
VIMP08670 MIR151B-201ENST00000584249 96 ntBASIC0.4□□□□□ -2.35
VIMP08670 AL662814.1-201ENST00000617364 121 ntBASIC0.4□□□□□ -2.35
VIMP08670 RNA5SP499-201ENST00000363982 119 ntBASIC0.39□□□□□ -2.35
VIMP08670 Y_RNA.430-201ENST00000384081 110 ntBASIC0.39□□□□□ -2.35
VIMP08670 AC092628.1-201ENST00000436250 252 ntBASIC0.39□□□□□ -2.35
VIMP08670 RPL39P25-201ENST00000449384 154 ntBASIC0.39□□□□□ -2.35
VIMP08670 RNU6-448P-201ENST00000517052 107 ntBASIC0.39□□□□□ -2.35
VIMP08670 MIR3152-201ENST00000579801 74 ntBASIC0.39□□□□□ -2.35
VIMP08670 MIR4714-201ENST00000580728 77 ntBASIC0.39□□□□□ -2.35
VIMP08670 SNORA4-201ENST00000584302 138 ntBASIC0.39□□□□□ -2.35
VIMP08670 MIR6788-201ENST00000618842 66 ntBASIC0.39□□□□□ -2.35
VIMP08670 MIRLET7D-201ENST00000362263 87 ntBASIC0.38□□□□□ -2.35
VIMP08670 RNA5SP517-201ENST00000364724 117 ntBASIC0.38□□□□□ -2.35
VIMP08670 Y_RNA.308-201ENST00000365043 101 ntBASIC0.38□□□□□ -2.35
VIMP08670 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.38□□□□□ -2.35
VIMP08670 SNORD127-201ENST00000458892 86 ntBASIC0.38□□□□□ -2.35
VIMP08670 SNORD116-25-201ENST00000516517 92 ntBASIC0.38□□□□□ -2.35
VIMP08670 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.38□□□□□ -2.35
VIMP08670 MIR5000-201ENST00000577717 103 ntBASIC0.38□□□□□ -2.35
VIMP08670 Y_RNA.149-201ENST00000363558 117 ntBASIC0.37□□□□□ -2.35
VIMP08670 RNU6-978P-201ENST00000364371 103 ntBASIC0.37□□□□□ -2.35
VIMP08670 RNA5SP117-201ENST00000365294 118 ntBASIC0.37□□□□□ -2.35
VIMP08670 Y_RNA.459-201ENST00000384251 102 ntBASIC0.37□□□□□ -2.35
VIMP08670 SNORA20-201ENST00000384662 132 ntBASIC0.37□□□□□ -2.35
VIMP08670 RNU6-578P-201ENST00000390980 103 ntBASIC0.37□□□□□ -2.35
VIMP08670 RNU6-493P-201ENST00000391321 108 ntBASIC0.37□□□□□ -2.35
VIMP08670 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.37□□□□□ -2.35
VIMP08670 RNU4-83P-201ENST00000410863 133 ntBASIC0.37□□□□□ -2.35
VIMP08670 SNORA25.12-201ENST00000516202 82 ntBASIC0.37□□□□□ -2.35
VIMP08670 RNU6-229P-201ENST00000516614 102 ntBASIC0.37□□□□□ -2.35
VIMP08670 RNA5SP94-201ENST00000516917 108 ntBASIC0.37□□□□□ -2.35
VIMP08670 RNU7-70P-201ENST00000516941 66 ntBASIC0.37□□□□□ -2.35
VIMP08670 MIR378D2-201ENST00000580636 98 ntBASIC0.37□□□□□ -2.35
VIMP08670 MIR4452-201ENST00000583004 71 ntBASIC0.37□□□□□ -2.35
VIMP08670 MIR8066-201ENST00000617280 78 ntBASIC0.37□□□□□ -2.35
VIMP08670 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.36□□□□□ -2.35
VIMP08670 Y_RNA.288-201ENST00000364854 92 ntBASIC0.36□□□□□ -2.35
VIMP08670 RNU1-133P-201ENST00000364867 167 ntBASIC0.36□□□□□ -2.35
VIMP08670 RNU6-738P-201ENST00000384531 106 ntBASIC0.36□□□□□ -2.35
VIMP08670 MIR548H3-201ENST00000408771 118 ntBASIC0.36□□□□□ -2.35
VIMP08670 RPS29P1-201ENST00000465274 159 ntBASIC0.36□□□□□ -2.35
VIMP08670 MIR3678-201ENST00000578455 94 ntBASIC0.36□□□□□ -2.35
VIMP08670 RNU2-4P-201ENST00000606190 192 ntBASIC0.36□□□□□ -2.35
VIMP08670 AC021613.1-201ENST00000623880 111 ntBASIC0.36□□□□□ -2.35
VIMP08670 Y_RNA.42-201ENST00000362660 108 ntBASIC0.35□□□□□ -2.35
VIMP08670 RNY4P28-201ENST00000365281 93 ntBASIC0.35□□□□□ -2.35
VIMP08670 SNORD114-22-201ENST00000365423 72 ntBASIC0.35□□□□□ -2.35
VIMP08670 MIR518A1-201ENST00000385068 85 ntBASIC0.35□□□□□ -2.35
VIMP08670 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.35□□□□□ -2.35
VIMP08670 MIR6841-201ENST00000637129 72 ntBASIC0.35□□□□□ -2.35
VIMP08670 SNORA22.1-201ENST00000362701 134 ntBASIC0.34□□□□□ -2.36
VIMP08670 U8.15-201ENST00000390947 134 ntBASIC0.34□□□□□ -2.36
VIMP08670 Y_RNA.617-201ENST00000410920 90 ntBASIC0.34□□□□□ -2.36
VIMP08670 SNORA40.8-201ENST00000411034 126 ntBASIC0.34□□□□□ -2.36
VIMP08670 RNA5SP127-201ENST00000411051 133 ntBASIC0.34□□□□□ -2.36
VIMP08670 AL358176.2-201ENST00000425769 204 ntBASIC0.34□□□□□ -2.36
VIMP08670 Y_RNA.797-201ENST00000515977 94 ntBASIC0.34□□□□□ -2.36
VIMP08670 SCARNA15-202ENST00000516881 127 ntBASIC0.34□□□□□ -2.36
VIMP08670 AC141846.1-201ENST00000568348 142 ntBASIC0.34□□□□□ -2.36
VIMP08670 SNORD27-201ENST00000363981 72 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms