Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 RNU7-197P-201ENST00000458836 62 ntBASIC1.13□□□□□ -2.23
MMP2P08253 RNU11-2P-201ENST00000516898 142 ntBASIC1.13□□□□□ -2.23
MMP2P08253 RNU2-60P-201ENST00000517290 128 ntBASIC1.13□□□□□ -2.23
MMP2P08253 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.13□□□□□ -2.23
MMP2P08253 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.13□□□□□ -2.23
MMP2P08253 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
MMP2P08253 Y_RNA.251-201ENST00000364551 99 ntBASIC1.12□□□□□ -2.23
MMP2P08253 AL392103.1-201ENST00000447000 198 ntBASIC1.12□□□□□ -2.23
MMP2P08253 RNU7-21P-201ENST00000459430 62 ntBASIC1.12□□□□□ -2.23
MMP2P08253 RNU7-80P-201ENST00000459562 61 ntBASIC1.12□□□□□ -2.23
MMP2P08253 RNU7-200P-201ENST00000516105 62 ntBASIC1.12□□□□□ -2.23
MMP2P08253 RNA5SP236-201ENST00000516169 116 ntBASIC1.12□□□□□ -2.23
MMP2P08253 RNU7-70P-201ENST00000516941 66 ntBASIC1.12□□□□□ -2.23
MMP2P08253 AC131055.1-201ENST00000584626 316 ntBASIC1.12□□□□□ -2.23
MMP2P08253 SEPT14P17-201ENST00000617978 177 ntBASIC1.12□□□□□ -2.23
MMP2P08253 AC091932.4-201ENST00000623386 200 ntBASIC1.12□□□□□ -2.23
MMP2P08253 MIR6516-201ENST00000630554 81 ntBASIC1.12□□□□□ -2.23
MMP2P08253 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.12□□□□□ -2.23
MMP2P08253 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
MMP2P08253 AL596211.1-201ENST00000569873 2277 ntBASIC1.12□□□□□ -2.23
MMP2P08253 MIR302B-201ENST00000362188 73 ntBASIC1.11□□□□□ -2.23
MMP2P08253 RNU6-396P-201ENST00000365369 105 ntBASIC1.11□□□□□ -2.23
MMP2P08253 SNORD12-201ENST00000391002 90 ntBASIC1.11□□□□□ -2.23
MMP2P08253 RNU6-1190P-201ENST00000410811 104 ntBASIC1.11□□□□□ -2.23
MMP2P08253 AC063976.4-201ENST00000421971 163 ntBASIC1.11□□□□□ -2.23
MMP2P08253 AC002429.1-201ENST00000437672 148 ntBASIC1.11□□□□□ -2.23
MMP2P08253 RN7SKP179-201ENST00000516126 217 ntBASIC1.11□□□□□ -2.23
MMP2P08253 SNORA25.12-201ENST00000516202 82 ntBASIC1.11□□□□□ -2.23
MMP2P08253 HSPE1P19-201ENST00000603327 295 ntBASIC1.11□□□□□ -2.23
MMP2P08253 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.11□□□□□ -2.23
MMP2P08253 AL391516.1-201ENST00000554380 2449 ntBASIC1.1□□□□□ -2.23
MMP2P08253 RNU6-654P-201ENST00000364373 107 ntBASIC1.1□□□□□ -2.23
MMP2P08253 Y_RNA.400-201ENST00000383963 111 ntBASIC1.1□□□□□ -2.23
MMP2P08253 Y_RNA.454-201ENST00000384224 113 ntBASIC1.1□□□□□ -2.23
MMP2P08253 Y_RNA.506-201ENST00000384494 102 ntBASIC1.1□□□□□ -2.23
MMP2P08253 MIR1285-1-201ENST00000408593 84 ntBASIC1.1□□□□□ -2.23
MMP2P08253 MRPL35P3-201ENST00000421557 364 ntBASIC1.1□□□□□ -2.23
MMP2P08253 HMGN1P33-201ENST00000432945 451 ntBASIC1.1□□□□□ -2.23
MMP2P08253 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.1□□□□□ -2.23
MMP2P08253 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.1□□□□□ -2.23
MMP2P08253 RNU7-90P-201ENST00000459216 62 ntBASIC1.1□□□□□ -2.23
MMP2P08253 OR2A41P-201ENST00000473586 105 ntBASIC1.1□□□□□ -2.23
MMP2P08253 MIR2115-201ENST00000516657 100 ntBASIC1.1□□□□□ -2.23
MMP2P08253 MIR6504-201ENST00000613520 61 ntBASIC1.1□□□□□ -2.23
MMP2P08253 Y_RNA.215-201ENST00000364204 112 ntBASIC1.09□□□□□ -2.23
MMP2P08253 RNU6-1062P-201ENST00000383908 107 ntBASIC1.09□□□□□ -2.23
MMP2P08253 MIR19B1-201ENST00000384829 87 ntBASIC1.09□□□□□ -2.23
MMP2P08253 MIR569-201ENST00000385228 96 ntBASIC1.09□□□□□ -2.23
MMP2P08253 RNU6-460P-201ENST00000391158 108 ntBASIC1.09□□□□□ -2.23
MMP2P08253 MIR1276-201ENST00000408707 83 ntBASIC1.09□□□□□ -2.23
MMP2P08253 AC090844.1-201ENST00000422019 156 ntBASIC1.09□□□□□ -2.23
MMP2P08253 RNU7-45P-201ENST00000459460 63 ntBASIC1.09□□□□□ -2.23
MMP2P08253 RNU6-346P-201ENST00000516288 111 ntBASIC1.09□□□□□ -2.23
MMP2P08253 MIR8055-201ENST00000610739 97 ntBASIC1.09□□□□□ -2.23
MMP2P08253 AC012676.2-201ENST00000619258 186 ntBASIC1.09□□□□□ -2.23
MMP2P08253 RNU6-508P-201ENST00000363231 103 ntBASIC1.08□□□□□ -2.24
MMP2P08253 SNORA1.1-201ENST00000364671 133 ntBASIC1.08□□□□□ -2.24
MMP2P08253 RNY1P5-201ENST00000383890 115 ntBASIC1.08□□□□□ -2.24
MMP2P08253 RNU6-125P-201ENST00000384505 107 ntBASIC1.08□□□□□ -2.24
MMP2P08253 Y_RNA.584-201ENST00000391090 114 ntBASIC1.08□□□□□ -2.24
MMP2P08253 RNA5SP95-201ENST00000410319 137 ntBASIC1.08□□□□□ -2.24
MMP2P08253 snoU13.18-201ENST00000459483 104 ntBASIC1.08□□□□□ -2.24
MMP2P08253 RNU6-426P-201ENST00000516464 97 ntBASIC1.08□□□□□ -2.24
MMP2P08253 Y_RNA.686-201ENST00000516548 134 ntBASIC1.08□□□□□ -2.24
MMP2P08253 AC023827.1-201ENST00000569247 97 ntBASIC1.08□□□□□ -2.24
MMP2P08253 MIR548X2-201ENST00000579776 100 ntBASIC1.08□□□□□ -2.24
MMP2P08253 SNORD114-21-201ENST00000606412 72 ntBASIC1.08□□□□□ -2.24
MMP2P08253 AL020996.3-201ENST00000606617 222 ntBASIC1.08□□□□□ -2.24
MMP2P08253 Y_RNA.191-201ENST00000363972 113 ntBASIC1.07□□□□□ -2.24
MMP2P08253 RNU1-133P-201ENST00000364867 167 ntBASIC1.07□□□□□ -2.24
MMP2P08253 MIR513C-201ENST00000401352 84 ntBASIC1.07□□□□□ -2.24
MMP2P08253 RNU6-613P-201ENST00000410412 108 ntBASIC1.07□□□□□ -2.24
MMP2P08253 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.07□□□□□ -2.24
MMP2P08253 Z97988.1-201ENST00000637697 135 ntBASIC1.07□□□□□ -2.24
MMP2P08253 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
MMP2P08253 RNU4-16P-201ENST00000364737 141 ntBASIC1.06□□□□□ -2.24
MMP2P08253 Y_RNA.488-201ENST00000384403 102 ntBASIC1.06□□□□□ -2.24
MMP2P08253 SNORA20-201ENST00000384662 132 ntBASIC1.06□□□□□ -2.24
MMP2P08253 SNORD38B-201ENST00000384690 67 ntBASIC1.06□□□□□ -2.24
MMP2P08253 MIR489-201ENST00000384923 84 ntBASIC1.06□□□□□ -2.24
MMP2P08253 SNORA26.6-201ENST00000391256 115 ntBASIC1.06□□□□□ -2.24
MMP2P08253 RNA5SP272-201ENST00000516095 111 ntBASIC1.06□□□□□ -2.24
MMP2P08253 AP000753.3-201ENST00000604083 169 ntBASIC1.06□□□□□ -2.24
MMP2P08253 SNORD38B-202ENST00000625943 69 ntBASIC1.06□□□□□ -2.24
MMP2P08253 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.05□□□□□ -2.24
MMP2P08253 RNU6-774P-201ENST00000363238 107 ntBASIC1.05□□□□□ -2.24
MMP2P08253 Y_RNA.120-201ENST00000363304 110 ntBASIC1.05□□□□□ -2.24
MMP2P08253 RNU6-915P-201ENST00000364943 103 ntBASIC1.05□□□□□ -2.24
MMP2P08253 Y_RNA.420-201ENST00000384043 110 ntBASIC1.05□□□□□ -2.24
MMP2P08253 SNORA2B-201ENST00000384583 137 ntBASIC1.05□□□□□ -2.24
MMP2P08253 RNU6-205P-201ENST00000390858 107 ntBASIC1.05□□□□□ -2.24
MMP2P08253 RPS29P28-201ENST00000446439 141 ntBASIC1.05□□□□□ -2.24
MMP2P08253 Y_RNA.651-201ENST00000459380 103 ntBASIC1.05□□□□□ -2.24
MMP2P08253 RNA5SP102-201ENST00000516865 106 ntBASIC1.05□□□□□ -2.24
MMP2P08253 AC036111.3-201ENST00000526389 112 ntBASIC1.05□□□□□ -2.24
MMP2P08253 MIR4295-201ENST00000585286 85 ntBASIC1.05□□□□□ -2.24
MMP2P08253 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.05□□□□□ -2.24
MMP2P08253 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
MMP2P08253 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
MMP2P08253 RNU6-349P-201ENST00000362402 107 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 157.5 ms