Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 SNORD92-201ENST00000585078 85 ntBASIC0.34□□□□□ -2.36
P04436 MIR6717-201ENST00000622747 73 ntBASIC0.34□□□□□ -2.36
P04436 MIRLET7D-201ENST00000362263 87 ntBASIC0.33□□□□□ -2.36
P04436 Y_RNA.7-201ENST00000362352 102 ntBASIC0.33□□□□□ -2.36
P04436 RNU4-45P-201ENST00000365469 141 ntBASIC0.33□□□□□ -2.36
P04436 SNORD100-201ENST00000408573 76 ntBASIC0.33□□□□□ -2.36
P04436 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.33□□□□□ -2.36
P04436 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.33□□□□□ -2.36
P04436 AL162730.1-201ENST00000605734 292 ntBASIC0.33□□□□□ -2.36
P04436 AL365265.1-201ENST00000621045 234 ntBASIC0.33□□□□□ -2.36
P04436 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
P04436 AC090625.1-201ENST00000357130 210 ntBASIC0.32□□□□□ -2.36
P04436 MIR335-201ENST00000362173 94 ntBASIC0.32□□□□□ -2.36
P04436 SNORD114-26-201ENST00000363543 72 ntBASIC0.32□□□□□ -2.36
P04436 RNU6-472P-201ENST00000384299 107 ntBASIC0.32□□□□□ -2.36
P04436 AC002350.1-201ENST00000490759 375 ntBASIC0.32□□□□□ -2.36
P04436 MIR342-201ENST00000362212 99 ntBASIC0.31□□□□□ -2.36
P04436 RNA5SP517-201ENST00000364724 117 ntBASIC0.31□□□□□ -2.36
P04436 Y_RNA.416-201ENST00000384014 113 ntBASIC0.31□□□□□ -2.36
P04436 Y_RNA.540-201ENST00000384638 111 ntBASIC0.31□□□□□ -2.36
P04436 MIR193B-201ENST00000384907 83 ntBASIC0.31□□□□□ -2.36
P04436 SNORA26-201ENST00000391286 122 ntBASIC0.31□□□□□ -2.36
P04436 RNU7-156P-201ENST00000517214 74 ntBASIC0.31□□□□□ -2.36
P04436 MIR3129-201ENST00000581095 76 ntBASIC0.31□□□□□ -2.36
P04436 MIR5197-201ENST00000583721 112 ntBASIC0.31□□□□□ -2.36
P04436 MIR8062-201ENST00000621515 85 ntBASIC0.31□□□□□ -2.36
P04436 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
P04436 MIR1257-201ENST00000408490 117 ntBASIC0.3□□□□□ -2.36
P04436 MIR548F4-201ENST00000408515 105 ntBASIC0.3□□□□□ -2.36
P04436 AC096949.1-201ENST00000412047 152 ntBASIC0.3□□□□□ -2.36
P04436 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.3□□□□□ -2.36
P04436 AL442067.1-201ENST00000613261 223 ntBASIC0.3□□□□□ -2.36
P04436 MIR8066-201ENST00000617280 78 ntBASIC0.3□□□□□ -2.36
P04436 Y_RNA.76-201ENST00000362931 109 ntBASIC0.29□□□□□ -2.36
P04436 Y_RNA.199-201ENST00000364014 102 ntBASIC0.29□□□□□ -2.36
P04436 Y_RNA.466-201ENST00000384294 113 ntBASIC0.29□□□□□ -2.36
P04436 MT-TF-201ENST00000387314 71 ntBASIC0.29□□□□□ -2.36
P04436 RNU6-1319P-201ENST00000390855 104 ntBASIC0.29□□□□□ -2.36
P04436 RNU6-747P-201ENST00000390928 104 ntBASIC0.29□□□□□ -2.36
P04436 RNU6-241P-201ENST00000391148 104 ntBASIC0.29□□□□□ -2.36
P04436 RNU6-447P-201ENST00000410293 104 ntBASIC0.29□□□□□ -2.36
P04436 RNU6-1118P-201ENST00000410382 104 ntBASIC0.29□□□□□ -2.36
P04436 RNU6-1076P-201ENST00000410397 104 ntBASIC0.29□□□□□ -2.36
P04436 RNU6-355P-201ENST00000410427 104 ntBASIC0.29□□□□□ -2.36
P04436 RNU6-791P-201ENST00000410467 104 ntBASIC0.29□□□□□ -2.36
P04436 RNU6-705P-201ENST00000410601 104 ntBASIC0.29□□□□□ -2.36
P04436 RNU6-1100P-201ENST00000410691 104 ntBASIC0.29□□□□□ -2.36
P04436 RNU6-860P-201ENST00000410860 104 ntBASIC0.29□□□□□ -2.36
P04436 RNU6-1217P-201ENST00000411276 104 ntBASIC0.29□□□□□ -2.36
P04436 RNU6-785P-201ENST00000411324 104 ntBASIC0.29□□□□□ -2.36
P04436 RNU6-635P-201ENST00000516651 102 ntBASIC0.29□□□□□ -2.36
P04436 RNA5SP94-201ENST00000516917 108 ntBASIC0.29□□□□□ -2.36
P04436 AC044792.1-201ENST00000593294 196 ntBASIC0.29□□□□□ -2.36
P04436 U6.90-201ENST00000614007 104 ntBASIC0.29□□□□□ -2.36
P04436 U6.70-201ENST00000620287 104 ntBASIC0.29□□□□□ -2.36
P04436 AC091932.4-201ENST00000623386 200 ntBASIC0.29□□□□□ -2.36
P04436 MIR103A1-201ENST00000362165 78 ntBASIC0.28□□□□□ -2.36
P04436 Y_RNA.42-201ENST00000362660 108 ntBASIC0.28□□□□□ -2.36
P04436 Y_RNA.351-201ENST00000365436 96 ntBASIC0.28□□□□□ -2.36
P04436 RNU6-364P-201ENST00000384387 107 ntBASIC0.28□□□□□ -2.36
P04436 RNU6-679P-201ENST00000391003 106 ntBASIC0.28□□□□□ -2.36
P04436 Y_RNA.590-201ENST00000410140 107 ntBASIC0.28□□□□□ -2.36
P04436 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.28□□□□□ -2.36
P04436 RNA5SP134-201ENST00000516492 96 ntBASIC0.28□□□□□ -2.36
P04436 AP003072.1-201ENST00000531740 145 ntBASIC0.28□□□□□ -2.36
P04436 AC092634.7-201ENST00000621022 103 ntBASIC0.28□□□□□ -2.36
P04436 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
P04436 SNORD44.1-201ENST00000363202 61 ntBASIC0.27□□□□□ -2.37
P04436 RNU6-238P-201ENST00000363313 106 ntBASIC0.27□□□□□ -2.37
P04436 Y_RNA.430-201ENST00000384081 110 ntBASIC0.27□□□□□ -2.37
P04436 Y_RNA.461-201ENST00000384263 103 ntBASIC0.27□□□□□ -2.37
P04436 Y_RNA.542-201ENST00000384641 111 ntBASIC0.27□□□□□ -2.37
P04436 RNU4-43P-201ENST00000410628 137 ntBASIC0.27□□□□□ -2.37
P04436 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.27□□□□□ -2.37
P04436 AC108740.1-201ENST00000498629 225 ntBASIC0.27□□□□□ -2.37
P04436 Y_RNA.720-201ENST00000517166 92 ntBASIC0.27□□□□□ -2.37
P04436 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.27□□□□□ -2.37
P04436 AL365205.2-201ENST00000594586 68 ntBASIC0.27□□□□□ -2.37
P04436 AL662814.1-201ENST00000617364 121 ntBASIC0.27□□□□□ -2.37
P04436 MIR6841-201ENST00000637129 72 ntBASIC0.27□□□□□ -2.37
P04436 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.27□□□□□ -2.37
P04436 Y_RNA.176-201ENST00000363815 109 ntBASIC0.26□□□□□ -2.37
P04436 Y_RNA.326-201ENST00000365176 113 ntBASIC0.26□□□□□ -2.37
P04436 RNU4-17P-201ENST00000365598 141 ntBASIC0.26□□□□□ -2.37
P04436 RNU6-1292P-201ENST00000383856 107 ntBASIC0.26□□□□□ -2.37
P04436 Y_RNA.396-201ENST00000383949 103 ntBASIC0.26□□□□□ -2.37
P04436 RNU6-713P-201ENST00000384761 107 ntBASIC0.26□□□□□ -2.37
P04436 Y_RNA.574-201ENST00000384766 95 ntBASIC0.26□□□□□ -2.37
P04436 MIR518A1-201ENST00000385068 85 ntBASIC0.26□□□□□ -2.37
P04436 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.26□□□□□ -2.37
P04436 Y_RNA.617-201ENST00000410920 90 ntBASIC0.26□□□□□ -2.37
P04436 RNU6-448P-201ENST00000517052 107 ntBASIC0.26□□□□□ -2.37
P04436 MIR1273G-201ENST00000577677 100 ntBASIC0.26□□□□□ -2.37
P04436 SNORA36.1-201ENST00000363424 132 ntBASIC0.25□□□□□ -2.37
P04436 RNU6-978P-201ENST00000364371 103 ntBASIC0.25□□□□□ -2.37
P04436 RNU6-1327P-201ENST00000365302 105 ntBASIC0.25□□□□□ -2.37
P04436 U8.15-201ENST00000390947 134 ntBASIC0.25□□□□□ -2.37
P04436 Y_RNA.618-201ENST00000410949 107 ntBASIC0.25□□□□□ -2.37
P04436 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.25□□□□□ -2.37
P04436 RNY3P16-201ENST00000516338 101 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 240.1 ms