Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.59□□□□□ -2.66
APOBP04114 RNU6-690P-201ENST00000365242 106 ntBASIC-1.59□□□□□ -2.66
APOBP04114 Y_RNA.527-201ENST00000384573 102 ntBASIC-1.59□□□□□ -2.66
APOBP04114 RNU6-192P-201ENST00000391253 100 ntBASIC-1.59□□□□□ -2.66
APOBP04114 RNU6-1086P-201ENST00000410930 100 ntBASIC-1.59□□□□□ -2.66
APOBP04114 RNU6-998P-201ENST00000515894 101 ntBASIC-1.59□□□□□ -2.66
APOBP04114 AC107934.1-201ENST00000522215 217 ntBASIC-1.59□□□□□ -2.66
APOBP04114 MTND4LP25-201ENST00000570218 163 ntBASIC-1.59□□□□□ -2.66
APOBP04114 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.59□□□□□ -2.66
APOBP04114 RNU6-85P-201ENST00000605989 107 ntBASIC-1.59□□□□□ -2.66
APOBP04114 RMST_3.1-201ENST00000611651 109 ntBASIC-1.59□□□□□ -2.66
APOBP04114 RNU5B-1-201ENST00000363286 116 ntBASIC-1.59□□□□□ -2.66
APOBP04114 Y_RNA.366-201ENST00000365540 102 ntBASIC-1.59□□□□□ -2.66
APOBP04114 MTND4P24-201ENST00000424002 397 ntBASIC-1.59□□□□□ -2.66
APOBP04114 AC104072.1-201ENST00000568817 668 ntBASIC-1.59□□□□□ -2.66
APOBP04114 Y_RNA.157-201ENST00000363638 102 ntBASIC-1.6□□□□□ -2.67
APOBP04114 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.6□□□□□ -2.67
APOBP04114 SNORD70.1-201ENST00000391007 85 ntBASIC-1.6□□□□□ -2.67
APOBP04114 AC104850.1-201ENST00000435940 476 ntBASIC-1.6□□□□□ -2.67
APOBP04114 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-1.6□□□□□ -2.67
APOBP04114 AC141846.1-201ENST00000568348 142 ntBASIC-1.6□□□□□ -2.67
APOBP04114 MIR3920-201ENST00000581751 86 ntBASIC-1.6□□□□□ -2.67
APOBP04114 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-1.6□□□□□ -2.67
APOBP04114 MIR6773-201ENST00000612812 74 ntBASIC-1.6□□□□□ -2.67
APOBP04114 RNU6-961P-201ENST00000363893 105 ntBASIC-1.6□□□□□ -2.67
APOBP04114 RNU6-1040P-201ENST00000383974 107 ntBASIC-1.6□□□□□ -2.67
APOBP04114 RNU6-641P-201ENST00000384006 107 ntBASIC-1.6□□□□□ -2.67
APOBP04114 U6.112-201ENST00000384129 70 ntBASIC-1.6□□□□□ -2.67
APOBP04114 RNU6-933P-201ENST00000384424 107 ntBASIC-1.6□□□□□ -2.67
APOBP04114 RBMX2P4-201ENST00000441256 376 ntBASIC-1.6□□□□□ -2.67
APOBP04114 RNU6-760P-201ENST00000516078 97 ntBASIC-1.6□□□□□ -2.67
APOBP04114 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC-1.6□□□□□ -2.67
APOBP04114 MIR548O2-201ENST00000616090 70 ntBASIC-1.6□□□□□ -2.67
APOBP04114 AL445984.1-201ENST00000637834 659 ntBASIC-1.6□□□□□ -2.67
APOBP04114 MIR342-201ENST00000362212 99 ntBASIC-1.6□□□□□ -2.67
APOBP04114 Y_RNA.319-201ENST00000365138 92 ntBASIC-1.6□□□□□ -2.67
APOBP04114 AC005828.6-201ENST00000606610 232 ntBASIC-1.6□□□□□ -2.67
APOBP04114 Y_RNA.576-201ENST00000384781 102 ntBASIC-1.61□□□□□ -2.67
APOBP04114 AC099654.12-201ENST00000639868 649 ntBASIC-1.61□□□□□ -2.67
APOBP04114 MIR410-201ENST00000362222 80 ntBASIC-1.61□□□□□ -2.67
APOBP04114 Y_RNA.179-201ENST00000363844 90 ntBASIC-1.61□□□□□ -2.67
APOBP04114 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.61□□□□□ -2.67
APOBP04114 MTATP6P19-201ENST00000413797 659 ntBASIC-1.61□□□□□ -2.67
APOBP04114 MTND2P18-201ENST00000419962 1030 ntBASIC-1.61□□□□□ -2.67
APOBP04114 UBE2V1P12-201ENST00000503954 474 ntBASIC-1.61□□□□□ -2.67
APOBP04114 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-1.61□□□□□ -2.67
APOBP04114 AC018638.8-201ENST00000588755 281 ntBASIC-1.61□□□□□ -2.67
APOBP04114 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.61□□□□□ -2.67
APOBP04114 RNY4P25-201ENST00000459254 96 ntBASIC-1.61□□□□□ -2.67
APOBP04114 AL359880.1-201ENST00000621879 266 ntBASIC-1.61□□□□□ -2.67
APOBP04114 AL669831.3-213ENST00000636676 183 ntBASIC-1.61□□□□□ -2.67
APOBP04114 RNU6-563P-201ENST00000364872 108 ntBASIC-1.61□□□□□ -2.67
APOBP04114 MIR521-1-201ENST00000384902 87 ntBASIC-1.61□□□□□ -2.67
APOBP04114 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.61□□□□□ -2.67
APOBP04114 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-1.61□□□□□ -2.67
APOBP04114 Y_RNA.153-201ENST00000363615 91 ntBASIC-1.62□□□□□ -2.67
APOBP04114 Y_RNA.520-201ENST00000384556 102 ntBASIC-1.62□□□□□ -2.67
APOBP04114 RNU7-80P-201ENST00000459562 61 ntBASIC-1.62□□□□□ -2.67
APOBP04114 uc_338.11-201ENST00000619132 160 ntBASIC-1.62□□□□□ -2.67
APOBP04114 MIR3674-201ENST00000636576 68 ntBASIC-1.62□□□□□ -2.67
APOBP04114 TUSC7.1-201ENST00000610969 165 ntBASIC-1.62□□□□□ -2.67
APOBP04114 Y_RNA.372-201ENST00000365599 102 ntBASIC-1.62□□□□□ -2.67
APOBP04114 RNU6-1310P-201ENST00000384153 107 ntBASIC-1.62□□□□□ -2.67
APOBP04114 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC-1.62□□□□□ -2.67
APOBP04114 AC115989.2-201ENST00000578640 563 ntBASIC-1.62□□□□□ -2.67
APOBP04114 RNU4-50P-201ENST00000364361 141 ntBASIC-1.62□□□□□ -2.67
APOBP04114 RNU6-1242P-201ENST00000391052 103 ntBASIC-1.62□□□□□ -2.67
APOBP04114 AL365203.2-201ENST00000423444 196 ntBASIC-1.62□□□□□ -2.67
APOBP04114 RNU7-149P-201ENST00000516739 59 ntBASIC-1.62□□□□□ -2.67
APOBP04114 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-1.62□□□□□ -2.67
APOBP04114 Y_RNA.341-201ENST00000365341 102 ntBASIC-1.63□□□□□ -2.67
APOBP04114 RNU6-243P-201ENST00000391140 107 ntBASIC-1.63□□□□□ -2.67
APOBP04114 SNORA26.6-201ENST00000391256 115 ntBASIC-1.63□□□□□ -2.67
APOBP04114 RNU6-311P-201ENST00000516224 102 ntBASIC-1.63□□□□□ -2.67
APOBP04114 MIR582-201ENST00000365731 98 ntBASIC-1.63□□□□□ -2.67
APOBP04114 snoU109.3-201ENST00000459477 145 ntBASIC-1.63□□□□□ -2.67
APOBP04114 MIR3912-201ENST00000577566 105 ntBASIC-1.63□□□□□ -2.67
APOBP04114 AC002044.1-201ENST00000606707 158 ntBASIC-1.63□□□□□ -2.67
APOBP04114 MIR548O-201ENST00000408583 114 ntBASIC-1.63□□□□□ -2.67
APOBP04114 RNU6-693P-201ENST00000516134 107 ntBASIC-1.63□□□□□ -2.67
APOBP04114 MIR548W-201ENST00000581970 74 ntBASIC-1.63□□□□□ -2.67
APOBP04114 SNORD115-48-201ENST00000364764 76 ntBASIC-1.64□□□□□ -2.67
APOBP04114 MTND1P34-201ENST00000438556 671 ntBASIC-1.64□□□□□ -2.67
APOBP04114 Y_RNA.80-201ENST00000362996 102 ntBASIC-1.64□□□□□ -2.67
APOBP04114 RNU6-207P-201ENST00000384137 107 ntBASIC-1.64□□□□□ -2.67
APOBP04114 AL031003.1-201ENST00000404229 172 ntBASIC-1.64□□□□□ -2.67
APOBP04114 DLEU2_5.2-201ENST00000610606 84 ntBASIC-1.64□□□□□ -2.67
APOBP04114 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-1.64□□□□□ -2.67
APOBP04114 Y_RNA.51-201ENST00000362725 102 ntBASIC-1.64□□□□□ -2.67
APOBP04114 RNU2-66P-201ENST00000410650 161 ntBASIC-1.64□□□□□ -2.67
APOBP04114 Y_RNA.79-201ENST00000362992 113 ntBASIC-1.64□□□□□ -2.67
APOBP04114 RNU4-1-201ENST00000363925 141 ntBASIC-1.64□□□□□ -2.67
APOBP04114 SNORA63.6-201ENST00000364921 119 ntBASIC-1.64□□□□□ -2.67
APOBP04114 RNU6-88P-201ENST00000606801 100 ntBASIC-1.64□□□□□ -2.67
APOBP04114 RNU6-560P-201ENST00000364007 108 ntBASIC-1.65□□□□□ -2.67
APOBP04114 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-1.65□□□□□ -2.67
APOBP04114 CPDP1-201ENST00000579660 283 ntBASIC-1.65□□□□□ -2.67
APOBP04114 CLPTM1LP1-201ENST00000604519 484 ntBASIC-1.65□□□□□ -2.67
APOBP04114 Y_RNA.134-201ENST00000363435 105 ntBASIC-1.65□□□□□ -2.67
APOBP04114 RNY1P12-201ENST00000364251 105 ntBASIC-1.65□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 217.5 ms