Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 MIR6717-201ENST00000622747 73 ntBASIC0.76□□□□□ -2.29
MT-ND1P03886 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.76□□□□□ -2.29
MT-ND1P03886 AL596211.1-201ENST00000569873 2277 ntBASIC0.75□□□□□ -2.29
MT-ND1P03886 RNU6-369P-201ENST00000362515 102 ntBASIC0.75□□□□□ -2.29
MT-ND1P03886 Y_RNA.240-201ENST00000364469 95 ntBASIC0.75□□□□□ -2.29
MT-ND1P03886 Y_RNA.393-201ENST00000383936 102 ntBASIC0.75□□□□□ -2.29
MT-ND1P03886 SNORD12C-201ENST00000386307 89 ntBASIC0.75□□□□□ -2.29
MT-ND1P03886 MTND5P15-201ENST00000434246 349 ntBASIC0.75□□□□□ -2.29
MT-ND1P03886 AC074198.2-201ENST00000508153 258 ntBASIC0.75□□□□□ -2.29
MT-ND1P03886 RNA5SP255-201ENST00000516370 107 ntBASIC0.75□□□□□ -2.29
MT-ND1P03886 MIR4653-201ENST00000585107 83 ntBASIC0.75□□□□□ -2.29
MT-ND1P03886 MIR6740-201ENST00000618268 113 ntBASIC0.75□□□□□ -2.29
MT-ND1P03886 MIR3658-201ENST00000636291 56 ntBASIC0.75□□□□□ -2.29
MT-ND1P03886 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
MT-ND1P03886 MIR377-201ENST00000362145 69 ntBASIC0.74□□□□□ -2.29
MT-ND1P03886 Y_RNA.29-201ENST00000362570 113 ntBASIC0.74□□□□□ -2.29
MT-ND1P03886 RNU4-84P-201ENST00000364200 139 ntBASIC0.74□□□□□ -2.29
MT-ND1P03886 SNORA25.7-201ENST00000364375 127 ntBASIC0.74□□□□□ -2.29
MT-ND1P03886 SNORA1.1-201ENST00000364671 133 ntBASIC0.74□□□□□ -2.29
MT-ND1P03886 Y_RNA.785-201ENST00000384290 109 ntBASIC0.74□□□□□ -2.29
MT-ND1P03886 SNORD38B-201ENST00000384690 67 ntBASIC0.74□□□□□ -2.29
MT-ND1P03886 AC015818.7-201ENST00000428754 109 ntBASIC0.74□□□□□ -2.29
MT-ND1P03886 AC087499.7-201ENST00000441958 109 ntBASIC0.74□□□□□ -2.29
MT-ND1P03886 RNU7-80P-201ENST00000459562 61 ntBASIC0.74□□□□□ -2.29
MT-ND1P03886 RNU7-121P-201ENST00000516604 62 ntBASIC0.74□□□□□ -2.29
MT-ND1P03886 MIR4264-201ENST00000583520 66 ntBASIC0.74□□□□□ -2.29
MT-ND1P03886 AP000753.3-201ENST00000604083 169 ntBASIC0.74□□□□□ -2.29
MT-ND1P03886 AC090425.1-201ENST00000610007 140 ntBASIC0.74□□□□□ -2.29
MT-ND1P03886 SNORD38B-202ENST00000625943 69 ntBASIC0.74□□□□□ -2.29
MT-ND1P03886 MIR302B-201ENST00000362188 73 ntBASIC0.73□□□□□ -2.29
MT-ND1P03886 Y_RNA.52-201ENST00000362760 96 ntBASIC0.73□□□□□ -2.29
MT-ND1P03886 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.73□□□□□ -2.29
MT-ND1P03886 RNU6-588P-201ENST00000410281 105 ntBASIC0.73□□□□□ -2.29
MT-ND1P03886 AC107027.2-201ENST00000512197 115 ntBASIC0.73□□□□□ -2.29
MT-ND1P03886 MIR4498-201ENST00000577599 66 ntBASIC0.73□□□□□ -2.29
MT-ND1P03886 RNU6-818P-201ENST00000364837 108 ntBASIC0.72□□□□□ -2.29
MT-ND1P03886 Y_RNA.337-201ENST00000365312 102 ntBASIC0.72□□□□□ -2.29
MT-ND1P03886 RNU6-1318P-201ENST00000365389 103 ntBASIC0.72□□□□□ -2.29
MT-ND1P03886 SNORD89-201ENST00000390981 114 ntBASIC0.72□□□□□ -2.29
MT-ND1P03886 RNU6-239P-201ENST00000390990 99 ntBASIC0.72□□□□□ -2.29
MT-ND1P03886 SNORD83.1-201ENST00000411362 77 ntBASIC0.72□□□□□ -2.29
MT-ND1P03886 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.72□□□□□ -2.29
MT-ND1P03886 RNA5SP236-201ENST00000516169 116 ntBASIC0.72□□□□□ -2.29
MT-ND1P03886 Y_RNA.700-201ENST00000516806 100 ntBASIC0.72□□□□□ -2.29
MT-ND1P03886 MIR3973-201ENST00000579824 107 ntBASIC0.72□□□□□ -2.29
MT-ND1P03886 SNORD114-27-201ENST00000363766 70 ntBASIC0.71□□□□□ -2.3
MT-ND1P03886 RNU1-133P-201ENST00000364867 167 ntBASIC0.71□□□□□ -2.3
MT-ND1P03886 Y_RNA.441-201ENST00000384123 112 ntBASIC0.71□□□□□ -2.3
MT-ND1P03886 Y_RNA.454-201ENST00000384224 113 ntBASIC0.71□□□□□ -2.3
MT-ND1P03886 MIR588-201ENST00000384900 83 ntBASIC0.71□□□□□ -2.3
MT-ND1P03886 MIR100-201ENST00000385259 80 ntBASIC0.71□□□□□ -2.3
MT-ND1P03886 RNU6-1319P-201ENST00000390855 104 ntBASIC0.71□□□□□ -2.3
MT-ND1P03886 RNU6-747P-201ENST00000390928 104 ntBASIC0.71□□□□□ -2.3
MT-ND1P03886 RNU6-241P-201ENST00000391148 104 ntBASIC0.71□□□□□ -2.3
MT-ND1P03886 RNU6-1135P-201ENST00000411083 103 ntBASIC0.71□□□□□ -2.3
MT-ND1P03886 RNU6-177P-201ENST00000411257 104 ntBASIC0.71□□□□□ -2.3
MT-ND1P03886 RNU7-62P-201ENST00000458856 62 ntBASIC0.71□□□□□ -2.3
MT-ND1P03886 snoU13.2-201ENST00000459201 104 ntBASIC0.71□□□□□ -2.3
MT-ND1P03886 TRMT112P2-201ENST00000512910 132 ntBASIC0.71□□□□□ -2.3
MT-ND1P03886 Y_RNA.662-201ENST00000516028 97 ntBASIC0.71□□□□□ -2.3
MT-ND1P03886 RNU6-113P-201ENST00000516653 101 ntBASIC0.71□□□□□ -2.3
MT-ND1P03886 RNU2-60P-201ENST00000517290 128 ntBASIC0.71□□□□□ -2.3
MT-ND1P03886 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.71□□□□□ -2.3
MT-ND1P03886 RNU6-934P-201ENST00000365154 107 ntBASIC0.7□□□□□ -2.3
MT-ND1P03886 Y_RNA.357-201ENST00000365487 109 ntBASIC0.7□□□□□ -2.3
MT-ND1P03886 Y_RNA.497-201ENST00000384447 98 ntBASIC0.7□□□□□ -2.3
MT-ND1P03886 MIR605-201ENST00000385078 83 ntBASIC0.7□□□□□ -2.3
MT-ND1P03886 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.7□□□□□ -2.3
MT-ND1P03886 MIR1827-201ENST00000408549 66 ntBASIC0.7□□□□□ -2.3
MT-ND1P03886 RNU6-994P-201ENST00000410507 111 ntBASIC0.7□□□□□ -2.3
MT-ND1P03886 U7.7-201ENST00000459276 60 ntBASIC0.7□□□□□ -2.3
MT-ND1P03886 RNU6-1258P-201ENST00000516911 111 ntBASIC0.7□□□□□ -2.3
MT-ND1P03886 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.7□□□□□ -2.3
MT-ND1P03886 AC021613.1-201ENST00000623880 111 ntBASIC0.7□□□□□ -2.3
MT-ND1P03886 MIR6844-201ENST00000637122 62 ntBASIC0.7□□□□□ -2.3
MT-ND1P03886 MIR6841-201ENST00000637129 72 ntBASIC0.7□□□□□ -2.3
MT-ND1P03886 MIR6866-201ENST00000638146 69 ntBASIC0.7□□□□□ -2.3
MT-ND1P03886 AC010332.2-201ENST00000613083 1904 ntBASIC0.7□□□□□ -2.3
MT-ND1P03886 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.69□□□□□ -2.3
MT-ND1P03886 HSBP1P2-201ENST00000299671 229 ntBASIC0.69□□□□□ -2.3
MT-ND1P03886 RNU6-508P-201ENST00000363231 103 ntBASIC0.69□□□□□ -2.3
MT-ND1P03886 RNU4-16P-201ENST00000364737 141 ntBASIC0.69□□□□□ -2.3
MT-ND1P03886 Y_RNA.430-201ENST00000384081 110 ntBASIC0.69□□□□□ -2.3
MT-ND1P03886 MIR563-201ENST00000385080 79 ntBASIC0.69□□□□□ -2.3
MT-ND1P03886 PCNPP3-201ENST00000393579 471 ntBASIC0.69□□□□□ -2.3
MT-ND1P03886 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.69□□□□□ -2.3
MT-ND1P03886 RNU6-321P-201ENST00000410912 106 ntBASIC0.69□□□□□ -2.3
MT-ND1P03886 RPS26P5-201ENST00000418544 335 ntBASIC0.69□□□□□ -2.3
MT-ND1P03886 AL606490.4-201ENST00000423117 127 ntBASIC0.69□□□□□ -2.3
MT-ND1P03886 AC108729.3-201ENST00000513484 108 ntBASIC0.69□□□□□ -2.3
MT-ND1P03886 RNU6-237P-201ENST00000515985 71 ntBASIC0.69□□□□□ -2.3
MT-ND1P03886 AC020891.4-201ENST00000605745 93 ntBASIC0.69□□□□□ -2.3
MT-ND1P03886 AC023934.1-201ENST00000574529 2389 ntBASIC0.68□□□□□ -2.3
MT-ND1P03886 MIR373-201ENST00000362273 69 ntBASIC0.68□□□□□ -2.3
MT-ND1P03886 RNU6-349P-201ENST00000362402 107 ntBASIC0.68□□□□□ -2.3
MT-ND1P03886 Y_RNA.272-201ENST00000364696 102 ntBASIC0.68□□□□□ -2.3
MT-ND1P03886 RNU6-110P-201ENST00000384508 104 ntBASIC0.68□□□□□ -2.3
MT-ND1P03886 SNORA75.5-201ENST00000391291 81 ntBASIC0.68□□□□□ -2.3
MT-ND1P03886 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.68□□□□□ -2.3
MT-ND1P03886 RNU6-1110P-201ENST00000516462 101 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 204.7 ms