Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 RPS29P24-201ENST00000486345 171 ntBASIC1.36□□□□□ -2.19
COL2A1P02458 RNU6-113P-201ENST00000516653 101 ntBASIC1.36□□□□□ -2.19
COL2A1P02458 RNU7-193P-201ENST00000516723 65 ntBASIC1.36□□□□□ -2.19
COL2A1P02458 AP003484.1-201ENST00000530974 250 ntBASIC1.36□□□□□ -2.19
COL2A1P02458 MIR5197-201ENST00000583721 112 ntBASIC1.36□□□□□ -2.19
COL2A1P02458 MIR8054-201ENST00000620877 86 ntBASIC1.36□□□□□ -2.19
COL2A1P02458 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
COL2A1P02458 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.35□□□□□ -2.19
COL2A1P02458 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
COL2A1P02458 MIR373-201ENST00000362273 69 ntBASIC1.35□□□□□ -2.19
COL2A1P02458 Y_RNA.344-201ENST00000365381 112 ntBASIC1.35□□□□□ -2.19
COL2A1P02458 Y_RNA.348-201ENST00000365403 103 ntBASIC1.35□□□□□ -2.19
COL2A1P02458 MIR590-201ENST00000385008 97 ntBASIC1.35□□□□□ -2.19
COL2A1P02458 U8.16-201ENST00000391279 133 ntBASIC1.35□□□□□ -2.19
COL2A1P02458 RPS3AP1-201ENST00000413190 320 ntBASIC1.35□□□□□ -2.19
COL2A1P02458 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.35□□□□□ -2.19
COL2A1P02458 AL353689.1-201ENST00000438895 199 ntBASIC1.35□□□□□ -2.19
COL2A1P02458 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.35□□□□□ -2.19
COL2A1P02458 SNORA31.4-201ENST00000516049 129 ntBASIC1.35□□□□□ -2.19
COL2A1P02458 Y_RNA.681-201ENST00000516445 113 ntBASIC1.35□□□□□ -2.19
COL2A1P02458 RNU2-35P-201ENST00000516446 142 ntBASIC1.35□□□□□ -2.19
COL2A1P02458 RNU7-6P-201ENST00000516845 62 ntBASIC1.35□□□□□ -2.19
COL2A1P02458 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.35□□□□□ -2.19
COL2A1P02458 Y_RNA.99-201ENST00000363138 105 ntBASIC1.34□□□□□ -2.19
COL2A1P02458 Y_RNA.163-201ENST00000363702 113 ntBASIC1.34□□□□□ -2.19
COL2A1P02458 U8.6-201ENST00000364939 135 ntBASIC1.34□□□□□ -2.19
COL2A1P02458 Y_RNA.362-201ENST00000365518 110 ntBASIC1.34□□□□□ -2.19
COL2A1P02458 Y_RNA.440-201ENST00000384120 114 ntBASIC1.34□□□□□ -2.19
COL2A1P02458 AL512326.2-201ENST00000426359 151 ntBASIC1.34□□□□□ -2.19
COL2A1P02458 RNU7-123P-201ENST00000515911 60 ntBASIC1.34□□□□□ -2.19
COL2A1P02458 RNVU1-2-201ENST00000516326 135 ntBASIC1.34□□□□□ -2.19
COL2A1P02458 RNA5SP476-201ENST00000516613 103 ntBASIC1.34□□□□□ -2.19
COL2A1P02458 AC141557.1-201ENST00000540982 400 ntBASIC1.34□□□□□ -2.19
COL2A1P02458 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.34□□□□□ -2.19
COL2A1P02458 AC006441.5-201ENST00000612680 209 ntBASIC1.34□□□□□ -2.19
COL2A1P02458 AP001318.4-201ENST00000616637 121 ntBASIC1.34□□□□□ -2.19
COL2A1P02458 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
COL2A1P02458 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.33□□□□□ -2.2
COL2A1P02458 Y_RNA.241-201ENST00000364470 117 ntBASIC1.33□□□□□ -2.2
COL2A1P02458 Y_RNA.281-201ENST00000364774 94 ntBASIC1.33□□□□□ -2.2
COL2A1P02458 Y_RNA.298-201ENST00000364960 107 ntBASIC1.33□□□□□ -2.2
COL2A1P02458 MIR676-201ENST00000390702 67 ntBASIC1.33□□□□□ -2.2
COL2A1P02458 RNA5SP136-201ENST00000410906 107 ntBASIC1.33□□□□□ -2.2
COL2A1P02458 CST2P1-201ENST00000425770 87 ntBASIC1.33□□□□□ -2.2
COL2A1P02458 RPS29P23-201ENST00000458635 123 ntBASIC1.33□□□□□ -2.2
COL2A1P02458 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.33□□□□□ -2.2
COL2A1P02458 RNU7-12P-201ENST00000516030 62 ntBASIC1.33□□□□□ -2.2
COL2A1P02458 RNU6-412P-201ENST00000516434 106 ntBASIC1.33□□□□□ -2.2
COL2A1P02458 RNU6-126P-201ENST00000516685 103 ntBASIC1.33□□□□□ -2.2
COL2A1P02458 MIR3126-201ENST00000577443 74 ntBASIC1.33□□□□□ -2.2
COL2A1P02458 AL096840.1-201ENST00000603287 93 ntBASIC1.33□□□□□ -2.2
COL2A1P02458 AC091932.4-201ENST00000623386 200 ntBASIC1.33□□□□□ -2.2
COL2A1P02458 AL589743.1-201ENST00000551932 2712 ntBASIC1.33□□□□□ -2.2
COL2A1P02458 RNU6-640P-201ENST00000363693 105 ntBASIC1.32□□□□□ -2.2
COL2A1P02458 Y_RNA.198-201ENST00000364013 98 ntBASIC1.32□□□□□ -2.2
COL2A1P02458 SNORA63D-201ENST00000364359 132 ntBASIC1.32□□□□□ -2.2
COL2A1P02458 RNU6-294P-201ENST00000364999 102 ntBASIC1.32□□□□□ -2.2
COL2A1P02458 Y_RNA.309-201ENST00000365046 111 ntBASIC1.32□□□□□ -2.2
COL2A1P02458 MIR488-201ENST00000365739 83 ntBASIC1.32□□□□□ -2.2
COL2A1P02458 Y_RNA.388-201ENST00000383919 113 ntBASIC1.32□□□□□ -2.2
COL2A1P02458 Y_RNA.433-201ENST00000384089 102 ntBASIC1.32□□□□□ -2.2
COL2A1P02458 MIR1302-5-201ENST00000408164 150 ntBASIC1.32□□□□□ -2.2
COL2A1P02458 AC015922.2-201ENST00000435593 184 ntBASIC1.32□□□□□ -2.2
COL2A1P02458 RNU1-131P-201ENST00000458943 161 ntBASIC1.32□□□□□ -2.2
COL2A1P02458 COX6CP6-201ENST00000490840 228 ntBASIC1.32□□□□□ -2.2
COL2A1P02458 RPS26P48-201ENST00000491713 339 ntBASIC1.32□□□□□ -2.2
COL2A1P02458 RNA5SP168-201ENST00000516642 112 ntBASIC1.32□□□□□ -2.2
COL2A1P02458 RNU6-958P-201ENST00000516995 106 ntBASIC1.32□□□□□ -2.2
COL2A1P02458 AC068339.1-201ENST00000526965 141 ntBASIC1.32□□□□□ -2.2
COL2A1P02458 MIRLET7C-201ENST00000362160 84 ntBASIC1.31□□□□□ -2.2
COL2A1P02458 Y_RNA.171-201ENST00000363760 102 ntBASIC1.31□□□□□ -2.2
COL2A1P02458 Y_RNA.328-201ENST00000365208 113 ntBASIC1.31□□□□□ -2.2
COL2A1P02458 Y_RNA.410-201ENST00000383992 113 ntBASIC1.31□□□□□ -2.2
COL2A1P02458 RNY1P6-201ENST00000384193 109 ntBASIC1.31□□□□□ -2.2
COL2A1P02458 MIR759-201ENST00000390224 91 ntBASIC1.31□□□□□ -2.2
COL2A1P02458 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
COL2A1P02458 RN7SKP200-201ENST00000410564 320 ntBASIC1.31□□□□□ -2.2
COL2A1P02458 RNU7-94P-201ENST00000459576 63 ntBASIC1.31□□□□□ -2.2
COL2A1P02458 AC087343.1-201ENST00000477341 475 ntBASIC1.31□□□□□ -2.2
COL2A1P02458 AL358944.1-201ENST00000528537 144 ntBASIC1.31□□□□□ -2.2
COL2A1P02458 MIR4778-201ENST00000577635 80 ntBASIC1.31□□□□□ -2.2
COL2A1P02458 MIR4305-201ENST00000583252 102 ntBASIC1.31□□□□□ -2.2
COL2A1P02458 Y_RNA.773-201ENST00000607168 90 ntBASIC1.31□□□□□ -2.2
COL2A1P02458 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
COL2A1P02458 MIR302B-201ENST00000362188 73 ntBASIC1.31□□□□□ -2.2
COL2A1P02458 RNU1-58P-201ENST00000362413 163 ntBASIC1.31□□□□□ -2.2
COL2A1P02458 RNY4P6-201ENST00000363667 96 ntBASIC1.31□□□□□ -2.2
COL2A1P02458 RNA5SP482-201ENST00000391269 118 ntBASIC1.31□□□□□ -2.2
COL2A1P02458 RNU2-7P-201ENST00000410794 178 ntBASIC1.31□□□□□ -2.2
COL2A1P02458 RPL39P25-201ENST00000449384 154 ntBASIC1.31□□□□□ -2.2
COL2A1P02458 RNU2-11P-201ENST00000459191 187 ntBASIC1.31□□□□□ -2.2
COL2A1P02458 RNU6-1258P-201ENST00000516911 111 ntBASIC1.31□□□□□ -2.2
COL2A1P02458 RNU6-762P-201ENST00000517107 102 ntBASIC1.31□□□□□ -2.2
COL2A1P02458 AC024995.1-201ENST00000523014 93 ntBASIC1.31□□□□□ -2.2
COL2A1P02458 MIR5009-201ENST00000578736 100 ntBASIC1.31□□□□□ -2.2
COL2A1P02458 MIR4762-201ENST00000585261 75 ntBASIC1.31□□□□□ -2.2
COL2A1P02458 AL353149.1-201ENST00000610667 244 ntBASIC1.31□□□□□ -2.2
COL2A1P02458 AL627230.6-201ENST00000611129 280 ntBASIC1.31□□□□□ -2.2
COL2A1P02458 MIR1255B1-201ENST00000636325 63 ntBASIC1.31□□□□□ -2.2
COL2A1P02458 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms