Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 RNA5SP33-201ENST00000516687 98 ntBASIC-0.44□□□□□ -2.48
COL1A1P02452 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.44□□□□□ -2.48
COL1A1P02452 AC141846.1-201ENST00000568348 142 ntBASIC-0.44□□□□□ -2.48
COL1A1P02452 MIR3179-1-201ENST00000578940 84 ntBASIC-0.44□□□□□ -2.48
COL1A1P02452 MIR3179-2-201ENST00000579107 84 ntBASIC-0.44□□□□□ -2.48
COL1A1P02452 MIR3179-3-201ENST00000579566 84 ntBASIC-0.44□□□□□ -2.48
COL1A1P02452 YWHAEP2-201ENST00000580066 112 ntBASIC-0.44□□□□□ -2.48
COL1A1P02452 MIR4423-201ENST00000580922 80 ntBASIC-0.44□□□□□ -2.48
COL1A1P02452 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.44□□□□□ -2.48
COL1A1P02452 AC124312.5-201ENST00000604451 268 ntBASIC-0.44□□□□□ -2.48
COL1A1P02452 MIR1244-1-201ENST00000612829 85 ntBASIC-0.44□□□□□ -2.48
COL1A1P02452 MIR3179-4-201ENST00000617599 84 ntBASIC-0.44□□□□□ -2.48
COL1A1P02452 AC022140.2-201ENST00000623500 188 ntBASIC-0.44□□□□□ -2.48
COL1A1P02452 MIR1244-3-201ENST00000635744 85 ntBASIC-0.44□□□□□ -2.48
COL1A1P02452 MIR1244-2-201ENST00000636449 85 ntBASIC-0.44□□□□□ -2.48
COL1A1P02452 MIR1244-4-202ENST00000636813 85 ntBASIC-0.44□□□□□ -2.48
COL1A1P02452 AC024614.3-201ENST00000637860 256 ntBASIC-0.44□□□□□ -2.48
COL1A1P02452 RNA5SP403-201ENST00000363598 108 ntBASIC-0.45□□□□□ -2.48
COL1A1P02452 RNU6-593P-201ENST00000364716 112 ntBASIC-0.45□□□□□ -2.48
COL1A1P02452 Y_RNA.473-201ENST00000384333 102 ntBASIC-0.45□□□□□ -2.48
COL1A1P02452 RNU6-831P-201ENST00000384548 107 ntBASIC-0.45□□□□□ -2.48
COL1A1P02452 SNORD41.1-201ENST00000391000 69 ntBASIC-0.45□□□□□ -2.48
COL1A1P02452 SNORA26.6-201ENST00000391256 115 ntBASIC-0.45□□□□□ -2.48
COL1A1P02452 Y_RNA.594-201ENST00000410373 140 ntBASIC-0.45□□□□□ -2.48
COL1A1P02452 AC009161.1-201ENST00000417306 376 ntBASIC-0.45□□□□□ -2.48
COL1A1P02452 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-0.45□□□□□ -2.48
COL1A1P02452 AC244505.6-201ENST00000452829 130 ntBASIC-0.45□□□□□ -2.48
COL1A1P02452 RNU6-415P-201ENST00000516252 97 ntBASIC-0.45□□□□□ -2.48
COL1A1P02452 RNU6-307P-201ENST00000516743 106 ntBASIC-0.45□□□□□ -2.48
COL1A1P02452 MIR4790-201ENST00000577799 79 ntBASIC-0.45□□□□□ -2.48
COL1A1P02452 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-0.45□□□□□ -2.48
COL1A1P02452 AC145423.2-201ENST00000610631 239 ntBASIC-0.45□□□□□ -2.48
COL1A1P02452 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.46□□□□□ -2.48
COL1A1P02452 RNU6-451P-201ENST00000362921 107 ntBASIC-0.46□□□□□ -2.48
COL1A1P02452 RNA5SP133-201ENST00000363368 119 ntBASIC-0.46□□□□□ -2.48
COL1A1P02452 RNU1-141P-201ENST00000364623 158 ntBASIC-0.46□□□□□ -2.48
COL1A1P02452 RNU6-99P-201ENST00000364721 107 ntBASIC-0.46□□□□□ -2.48
COL1A1P02452 RNY1P2-201ENST00000364820 117 ntBASIC-0.46□□□□□ -2.48
COL1A1P02452 RNY1P13-201ENST00000365030 105 ntBASIC-0.46□□□□□ -2.48
COL1A1P02452 Y_RNA.439-201ENST00000384119 94 ntBASIC-0.46□□□□□ -2.48
COL1A1P02452 RNY3P4-201ENST00000384428 101 ntBASIC-0.46□□□□□ -2.48
COL1A1P02452 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.46□□□□□ -2.48
COL1A1P02452 SNORA49-201ENST00000386157 136 ntBASIC-0.46□□□□□ -2.48
COL1A1P02452 AL590004.1-201ENST00000405321 300 ntBASIC-0.46□□□□□ -2.48
COL1A1P02452 RNU6-1156P-201ENST00000410365 100 ntBASIC-0.46□□□□□ -2.48
COL1A1P02452 RNA5SP261-201ENST00000410536 106 ntBASIC-0.46□□□□□ -2.48
COL1A1P02452 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-0.46□□□□□ -2.48
COL1A1P02452 AC016907.1-201ENST00000419483 435 ntBASIC-0.46□□□□□ -2.48
COL1A1P02452 MTND1P2-201ENST00000430604 821 ntBASIC-0.46□□□□□ -2.48
COL1A1P02452 AC022137.1-201ENST00000483735 151 ntBASIC-0.46□□□□□ -2.48
COL1A1P02452 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-0.46□□□□□ -2.48
COL1A1P02452 RNU6-693P-201ENST00000516134 107 ntBASIC-0.46□□□□□ -2.48
COL1A1P02452 Y_RNA.708-201ENST00000516950 96 ntBASIC-0.46□□□□□ -2.48
COL1A1P02452 RN7SKP295-201ENST00000517264 153 ntBASIC-0.46□□□□□ -2.48
COL1A1P02452 MIR548AG2-201ENST00000581228 64 ntBASIC-0.46□□□□□ -2.48
COL1A1P02452 MIR3920-201ENST00000581751 86 ntBASIC-0.46□□□□□ -2.48
COL1A1P02452 AC122108.2-201ENST00000611946 526 ntBASIC-0.46□□□□□ -2.48
COL1A1P02452 MIR6851-201ENST00000617060 67 ntBASIC-0.46□□□□□ -2.48
COL1A1P02452 uc_338.10-201ENST00000621872 182 ntBASIC-0.46□□□□□ -2.48
COL1A1P02452 MIR6717-201ENST00000622747 73 ntBASIC-0.46□□□□□ -2.48
COL1A1P02452 AC090617.10-201ENST00000624308 134 ntBASIC-0.46□□□□□ -2.48
COL1A1P02452 AC090582.1-201ENST00000636321 199 ntBASIC-0.46□□□□□ -2.48
COL1A1P02452 U6.109-201ENST00000636749 87 ntBASIC-0.46□□□□□ -2.48
COL1A1P02452 RNU6-154P-201ENST00000384306 106 ntBASIC-0.47□□□□□ -2.48
COL1A1P02452 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.47□□□□□ -2.48
COL1A1P02452 RNU2-14P-201ENST00000411053 191 ntBASIC-0.47□□□□□ -2.48
COL1A1P02452 AC098826.2-201ENST00000452011 651 ntBASIC-0.47□□□□□ -2.48
COL1A1P02452 RNU6-274P-201ENST00000459566 107 ntBASIC-0.47□□□□□ -2.48
COL1A1P02452 TRAJ51-201ENST00000504127 63 ntBASIC-0.47□□□□□ -2.48
COL1A1P02452 RNU7-149P-201ENST00000516739 59 ntBASIC-0.47□□□□□ -2.48
COL1A1P02452 RNU6-1314P-201ENST00000517139 104 ntBASIC-0.47□□□□□ -2.48
COL1A1P02452 AC144568.1-201ENST00000520139 137 ntBASIC-0.47□□□□□ -2.48
COL1A1P02452 AC145350.1-201ENST00000567426 208 ntBASIC-0.47□□□□□ -2.48
COL1A1P02452 AC140658.3-201ENST00000567603 271 ntBASIC-0.47□□□□□ -2.48
COL1A1P02452 MIR4659A-201ENST00000580269 81 ntBASIC-0.47□□□□□ -2.48
COL1A1P02452 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-0.47□□□□□ -2.48
COL1A1P02452 AC093783.1-201ENST00000612976 329 ntBASIC-0.47□□□□□ -2.48
COL1A1P02452 PISRT1.1-201ENST00000616930 107 ntBASIC-0.47□□□□□ -2.48
COL1A1P02452 RNA5SP192-201ENST00000364404 120 ntBASIC-0.48□□□□□ -2.49
COL1A1P02452 SNORD115-35-201ENST00000365122 82 ntBASIC-0.48□□□□□ -2.49
COL1A1P02452 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.48□□□□□ -2.49
COL1A1P02452 RNU6-144P-201ENST00000383951 107 ntBASIC-0.48□□□□□ -2.49
COL1A1P02452 RNU6-571P-201ENST00000384128 107 ntBASIC-0.48□□□□□ -2.49
COL1A1P02452 RNU6-1119P-201ENST00000384349 108 ntBASIC-0.48□□□□□ -2.49
COL1A1P02452 SNORD78.2-201ENST00000391076 69 ntBASIC-0.48□□□□□ -2.49
COL1A1P02452 MIR548I3-201ENST00000408378 149 ntBASIC-0.48□□□□□ -2.49
COL1A1P02452 RNU2-51P-201ENST00000410708 197 ntBASIC-0.48□□□□□ -2.49
COL1A1P02452 MTATP6P17-201ENST00000431030 672 ntBASIC-0.48□□□□□ -2.49
COL1A1P02452 SCARNA18B-201ENST00000458806 135 ntBASIC-0.48□□□□□ -2.49
COL1A1P02452 MTND5P5-201ENST00000503764 376 ntBASIC-0.48□□□□□ -2.49
COL1A1P02452 RNU6-998P-201ENST00000515894 101 ntBASIC-0.48□□□□□ -2.49
COL1A1P02452 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.48□□□□□ -2.49
COL1A1P02452 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.48□□□□□ -2.49
COL1A1P02452 Z99129.1-201ENST00000612510 255 ntBASIC-0.48□□□□□ -2.49
COL1A1P02452 MIR382-201ENST00000637119 76 ntBASIC-0.48□□□□□ -2.49
COL1A1P02452 MIR302B-201ENST00000362188 73 ntBASIC-0.48□□□□□ -2.49
COL1A1P02452 Y_RNA.77-201ENST00000362962 107 ntBASIC-0.48□□□□□ -2.49
COL1A1P02452 RNU4-80P-201ENST00000363200 141 ntBASIC-0.48□□□□□ -2.49
COL1A1P02452 RNY4P7-201ENST00000364600 96 ntBASIC-0.48□□□□□ -2.49
COL1A1P02452 RNU6-949P-201ENST00000384040 107 ntBASIC-0.48□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms