Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 RPS3AP1-201ENST00000413190 320 ntBASIC1.17□□□□□ -2.22
HLA-DQA2P01906 MTATP6P21-201ENST00000440681 189 ntBASIC1.17□□□□□ -2.22
HLA-DQA2P01906 Y_RNA.651-201ENST00000459380 103 ntBASIC1.17□□□□□ -2.22
HLA-DQA2P01906 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.17□□□□□ -2.22
HLA-DQA2P01906 RNU6-240P-201ENST00000516098 97 ntBASIC1.17□□□□□ -2.22
HLA-DQA2P01906 MIR2115-201ENST00000516657 100 ntBASIC1.17□□□□□ -2.22
HLA-DQA2P01906 RNU11-2P-201ENST00000516898 142 ntBASIC1.17□□□□□ -2.22
HLA-DQA2P01906 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.17□□□□□ -2.22
HLA-DQA2P01906 MIR4303-201ENST00000581299 66 ntBASIC1.17□□□□□ -2.22
HLA-DQA2P01906 SNORA25.8-201ENST00000364831 128 ntBASIC1.16□□□□□ -2.22
HLA-DQA2P01906 Y_RNA.294-201ENST00000364916 102 ntBASIC1.16□□□□□ -2.22
HLA-DQA2P01906 SNORA2B-201ENST00000384583 137 ntBASIC1.16□□□□□ -2.22
HLA-DQA2P01906 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
HLA-DQA2P01906 RNU1-123P-201ENST00000458950 160 ntBASIC1.16□□□□□ -2.22
HLA-DQA2P01906 RNU7-40P-201ENST00000516397 64 ntBASIC1.16□□□□□ -2.22
HLA-DQA2P01906 MIR3152-201ENST00000579801 74 ntBASIC1.16□□□□□ -2.22
HLA-DQA2P01906 AC027335.2-201ENST00000624030 375 ntBASIC1.16□□□□□ -2.22
HLA-DQA2P01906 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
HLA-DQA2P01906 RNU6-690P-201ENST00000365242 106 ntBASIC1.15□□□□□ -2.23
HLA-DQA2P01906 AL603914.1-201ENST00000401964 204 ntBASIC1.15□□□□□ -2.23
HLA-DQA2P01906 MRPL35P3-201ENST00000421557 364 ntBASIC1.15□□□□□ -2.23
HLA-DQA2P01906 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.15□□□□□ -2.23
HLA-DQA2P01906 RNU7-90P-201ENST00000459216 62 ntBASIC1.15□□□□□ -2.23
HLA-DQA2P01906 RNA5SP458-201ENST00000516188 119 ntBASIC1.15□□□□□ -2.23
HLA-DQA2P01906 AC036111.3-201ENST00000526389 112 ntBASIC1.15□□□□□ -2.23
HLA-DQA2P01906 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
HLA-DQA2P01906 RNU6-187P-201ENST00000384139 106 ntBASIC1.14□□□□□ -2.23
HLA-DQA2P01906 RNU6-1237P-201ENST00000384777 107 ntBASIC1.14□□□□□ -2.23
HLA-DQA2P01906 SNORA17.3-201ENST00000391159 129 ntBASIC1.14□□□□□ -2.23
HLA-DQA2P01906 RNU6-613P-201ENST00000410412 108 ntBASIC1.14□□□□□ -2.23
HLA-DQA2P01906 AC063976.4-201ENST00000421971 163 ntBASIC1.14□□□□□ -2.23
HLA-DQA2P01906 RNU6-1258P-201ENST00000516911 111 ntBASIC1.14□□□□□ -2.23
HLA-DQA2P01906 AP001328.1-201ENST00000528550 176 ntBASIC1.14□□□□□ -2.23
HLA-DQA2P01906 AP000753.3-201ENST00000604083 169 ntBASIC1.14□□□□□ -2.23
HLA-DQA2P01906 AC108081.1-201ENST00000604358 221 ntBASIC1.14□□□□□ -2.23
HLA-DQA2P01906 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.14□□□□□ -2.23
HLA-DQA2P01906 Y_RNA.343-201ENST00000365354 112 ntBASIC1.13□□□□□ -2.23
HLA-DQA2P01906 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.13□□□□□ -2.23
HLA-DQA2P01906 AC108667.1-201ENST00000428618 249 ntBASIC1.13□□□□□ -2.23
HLA-DQA2P01906 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.13□□□□□ -2.23
HLA-DQA2P01906 snoU13.21-201ENST00000459368 105 ntBASIC1.13□□□□□ -2.23
HLA-DQA2P01906 RNA5SP404-201ENST00000517118 132 ntBASIC1.13□□□□□ -2.23
HLA-DQA2P01906 MIR4781-201ENST00000585250 76 ntBASIC1.13□□□□□ -2.23
HLA-DQA2P01906 RNU6-94P-201ENST00000607728 107 ntBASIC1.13□□□□□ -2.23
HLA-DQA2P01906 AL512598.1-201ENST00000610158 273 ntBASIC1.13□□□□□ -2.23
HLA-DQA2P01906 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.13□□□□□ -2.23
HLA-DQA2P01906 AC010332.2-201ENST00000613083 1904 ntBASIC1.13□□□□□ -2.23
HLA-DQA2P01906 SNORA22.1-201ENST00000362701 134 ntBASIC1.12□□□□□ -2.23
HLA-DQA2P01906 Y_RNA.171-201ENST00000363760 102 ntBASIC1.12□□□□□ -2.23
HLA-DQA2P01906 SNORD113.3-201ENST00000364630 78 ntBASIC1.12□□□□□ -2.23
HLA-DQA2P01906 RNY1P5-201ENST00000383890 115 ntBASIC1.12□□□□□ -2.23
HLA-DQA2P01906 Y_RNA.568-201ENST00000384742 113 ntBASIC1.12□□□□□ -2.23
HLA-DQA2P01906 RNA5SP261-201ENST00000410536 106 ntBASIC1.12□□□□□ -2.23
HLA-DQA2P01906 POLR2J4-204ENST00000418424 324 ntBASIC1.12□□□□□ -2.23
HLA-DQA2P01906 RNU6-237P-201ENST00000515985 71 ntBASIC1.12□□□□□ -2.23
HLA-DQA2P01906 Y_RNA.692-201ENST00000516627 105 ntBASIC1.12□□□□□ -2.23
HLA-DQA2P01906 AC068338.1-201ENST00000565567 176 ntBASIC1.12□□□□□ -2.23
HLA-DQA2P01906 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.12□□□□□ -2.23
HLA-DQA2P01906 MIR3121-201ENST00000579680 77 ntBASIC1.12□□□□□ -2.23
HLA-DQA2P01906 uc_338.6-201ENST00000613544 171 ntBASIC1.12□□□□□ -2.23
HLA-DQA2P01906 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
HLA-DQA2P01906 RNA5SP432-201ENST00000362480 116 ntBASIC1.11□□□□□ -2.23
HLA-DQA2P01906 Y_RNA.366-201ENST00000365540 102 ntBASIC1.11□□□□□ -2.23
HLA-DQA2P01906 MIR588-201ENST00000384900 83 ntBASIC1.11□□□□□ -2.23
HLA-DQA2P01906 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.11□□□□□ -2.23
HLA-DQA2P01906 RNU7-62P-201ENST00000458856 62 ntBASIC1.11□□□□□ -2.23
HLA-DQA2P01906 SNORD124-201ENST00000459577 104 ntBASIC1.11□□□□□ -2.23
HLA-DQA2P01906 RN7SKP179-201ENST00000516126 217 ntBASIC1.11□□□□□ -2.23
HLA-DQA2P01906 AC133485.4-201ENST00000561835 220 ntBASIC1.11□□□□□ -2.23
HLA-DQA2P01906 AC138907.4-201ENST00000570107 226 ntBASIC1.11□□□□□ -2.23
HLA-DQA2P01906 Y_RNA.757-201ENST00000578934 114 ntBASIC1.11□□□□□ -2.23
HLA-DQA2P01906 MIR6740-201ENST00000618268 113 ntBASIC1.11□□□□□ -2.23
HLA-DQA2P01906 AP001340.1-201ENST00000624405 217 ntBASIC1.11□□□□□ -2.23
HLA-DQA2P01906 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
HLA-DQA2P01906 MIR378A-201ENST00000362177 66 ntBASIC1.1□□□□□ -2.23
HLA-DQA2P01906 SNORD12-201ENST00000391002 90 ntBASIC1.1□□□□□ -2.23
HLA-DQA2P01906 RNU4-62P-201ENST00000410125 130 ntBASIC1.1□□□□□ -2.23
HLA-DQA2P01906 RNU6-257P-201ENST00000410238 98 ntBASIC1.1□□□□□ -2.23
HLA-DQA2P01906 RNA5SP144-201ENST00000410846 116 ntBASIC1.1□□□□□ -2.23
HLA-DQA2P01906 AL512326.2-201ENST00000426359 151 ntBASIC1.1□□□□□ -2.23
HLA-DQA2P01906 MTND4LP9-201ENST00000427694 174 ntBASIC1.1□□□□□ -2.23
HLA-DQA2P01906 AC004223.1-201ENST00000479840 271 ntBASIC1.1□□□□□ -2.23
HLA-DQA2P01906 Y_RNA.703-201ENST00000516846 111 ntBASIC1.1□□□□□ -2.23
HLA-DQA2P01906 MIR4421-201ENST00000578133 69 ntBASIC1.1□□□□□ -2.23
HLA-DQA2P01906 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.1□□□□□ -2.23
HLA-DQA2P01906 MIR4264-201ENST00000583520 66 ntBASIC1.1□□□□□ -2.23
HLA-DQA2P01906 AC021443.1-201ENST00000604478 211 ntBASIC1.1□□□□□ -2.23
HLA-DQA2P01906 AC011603.4-201ENST00000611325 277 ntBASIC1.1□□□□□ -2.23
HLA-DQA2P01906 AC106800.4-201ENST00000614905 153 ntBASIC1.1□□□□□ -2.23
HLA-DQA2P01906 MIR6841-201ENST00000637129 72 ntBASIC1.1□□□□□ -2.23
HLA-DQA2P01906 Y_RNA.114-201ENST00000363265 113 ntBASIC1.09□□□□□ -2.23
HLA-DQA2P01906 Y_RNA.354-201ENST00000365448 111 ntBASIC1.09□□□□□ -2.23
HLA-DQA2P01906 Y_RNA.430-201ENST00000384081 110 ntBASIC1.09□□□□□ -2.23
HLA-DQA2P01906 RNU6-746P-201ENST00000384112 109 ntBASIC1.09□□□□□ -2.23
HLA-DQA2P01906 MIR150-201ENST00000385048 84 ntBASIC1.09□□□□□ -2.23
HLA-DQA2P01906 MT-TN-201ENST00000387400 73 ntBASIC1.09□□□□□ -2.23
HLA-DQA2P01906 SNORA40.6-201ENST00000391153 128 ntBASIC1.09□□□□□ -2.23
HLA-DQA2P01906 MIR548M-201ENST00000408260 86 ntBASIC1.09□□□□□ -2.23
HLA-DQA2P01906 AC015818.7-201ENST00000428754 109 ntBASIC1.09□□□□□ -2.23
HLA-DQA2P01906 AC087499.7-201ENST00000441958 109 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 217.4 ms