Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 RNU6-933P-201ENST00000384424 107 ntBASIC-1.38□□□□□ -2.63
TNFP01375 MT-TM-201ENST00000387377 68 ntBASIC-1.38□□□□□ -2.63
TNFP01375 AL031003.1-201ENST00000404229 172 ntBASIC-1.38□□□□□ -2.63
TNFP01375 RNU6-370P-201ENST00000411008 104 ntBASIC-1.38□□□□□ -2.63
TNFP01375 RPL35AP4-201ENST00000412007 102 ntBASIC-1.38□□□□□ -2.63
TNFP01375 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-1.38□□□□□ -2.63
TNFP01375 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC-1.38□□□□□ -2.63
TNFP01375 SNORD11-201ENST00000459124 84 ntBASIC-1.38□□□□□ -2.63
TNFP01375 RNU6-625P-201ENST00000459412 107 ntBASIC-1.38□□□□□ -2.63
TNFP01375 SEPT14P4-201ENST00000513445 186 ntBASIC-1.38□□□□□ -2.63
TNFP01375 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.38□□□□□ -2.63
TNFP01375 JPX_2.1-201ENST00000614161 69 ntBASIC-1.38□□□□□ -2.63
TNFP01375 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.38□□□□□ -2.63
TNFP01375 RNU6-1260P-201ENST00000362944 107 ntBASIC-1.39□□□□□ -2.63
TNFP01375 RNY1P16-201ENST00000363063 111 ntBASIC-1.39□□□□□ -2.63
TNFP01375 SNORD113-7-201ENST00000363762 77 ntBASIC-1.39□□□□□ -2.63
TNFP01375 SNORD115-27-201ENST00000364430 82 ntBASIC-1.39□□□□□ -2.63
TNFP01375 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.39□□□□□ -2.63
TNFP01375 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.39□□□□□ -2.63
TNFP01375 RNU6-318P-201ENST00000384283 103 ntBASIC-1.39□□□□□ -2.63
TNFP01375 RNU6-1242P-201ENST00000391052 103 ntBASIC-1.39□□□□□ -2.63
TNFP01375 SNORD77.3-201ENST00000391113 65 ntBASIC-1.39□□□□□ -2.63
TNFP01375 EIF1P2-201ENST00000428233 350 ntBASIC-1.39□□□□□ -2.63
TNFP01375 MTATP6P13-201ENST00000438531 667 ntBASIC-1.39□□□□□ -2.63
TNFP01375 TPTE2P5-203ENST00000458118 728 ntBASIC-1.39□□□□□ -2.63
TNFP01375 RNU7-187P-201ENST00000458985 68 ntBASIC-1.39□□□□□ -2.63
TNFP01375 RNU7-74P-201ENST00000459104 62 ntBASIC-1.39□□□□□ -2.63
TNFP01375 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-1.39□□□□□ -2.63
TNFP01375 RNU4ATAC8P-201ENST00000516196 109 ntBASIC-1.39□□□□□ -2.63
TNFP01375 RNU6-762P-201ENST00000517107 102 ntBASIC-1.39□□□□□ -2.63
TNFP01375 MIR548H5-201ENST00000580314 60 ntBASIC-1.39□□□□□ -2.63
TNFP01375 MIR4424-201ENST00000585257 86 ntBASIC-1.39□□□□□ -2.63
TNFP01375 AC060780.3-201ENST00000589464 80 ntBASIC-1.39□□□□□ -2.63
TNFP01375 AL158211.2-201ENST00000607282 395 ntBASIC-1.39□□□□□ -2.63
TNFP01375 RNU6-1192P-201ENST00000612197 107 ntBASIC-1.39□□□□□ -2.63
TNFP01375 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.39□□□□□ -2.63
TNFP01375 RNU6-489P-201ENST00000618289 107 ntBASIC-1.39□□□□□ -2.63
TNFP01375 RNU6-54P-201ENST00000365563 107 ntBASIC-1.4□□□□□ -2.63
TNFP01375 RNU6-1323P-201ENST00000384025 107 ntBASIC-1.4□□□□□ -2.63
TNFP01375 Y_RNA.436-201ENST00000384097 102 ntBASIC-1.4□□□□□ -2.63
TNFP01375 Y_RNA.587-201ENST00000391210 103 ntBASIC-1.4□□□□□ -2.63
TNFP01375 RNU6-192P-201ENST00000391253 100 ntBASIC-1.4□□□□□ -2.63
TNFP01375 AL161932.1-201ENST00000437408 146 ntBASIC-1.4□□□□□ -2.63
TNFP01375 MIR1270-201ENST00000459320 83 ntBASIC-1.4□□□□□ -2.63
TNFP01375 RNU7-79P-201ENST00000516082 62 ntBASIC-1.4□□□□□ -2.63
TNFP01375 AC108081.1-201ENST00000604358 221 ntBASIC-1.4□□□□□ -2.63
TNFP01375 AL357078.3-201ENST00000607528 618 ntBASIC-1.4□□□□□ -2.63
TNFP01375 AL589826.1-201ENST00000340697 249 ntBASIC-1.41□□□□□ -2.64
TNFP01375 RNU4-92P-201ENST00000363783 136 ntBASIC-1.41□□□□□ -2.64
TNFP01375 Y_RNA.182-201ENST00000363880 111 ntBASIC-1.41□□□□□ -2.64
TNFP01375 Y_RNA.293-201ENST00000364908 93 ntBASIC-1.41□□□□□ -2.64
TNFP01375 Y_RNA.405-201ENST00000383979 100 ntBASIC-1.41□□□□□ -2.64
TNFP01375 Y_RNA.451-201ENST00000384200 100 ntBASIC-1.41□□□□□ -2.64
TNFP01375 Y_RNA.524-201ENST00000384564 100 ntBASIC-1.41□□□□□ -2.64
TNFP01375 Y_RNA.561-201ENST00000384694 100 ntBASIC-1.41□□□□□ -2.64
TNFP01375 MIR507-201ENST00000385234 94 ntBASIC-1.41□□□□□ -2.64
TNFP01375 SNORD63B-201ENST00000411005 70 ntBASIC-1.41□□□□□ -2.64
TNFP01375 AF228730.4-201ENST00000421457 183 ntBASIC-1.41□□□□□ -2.64
TNFP01375 CYCSP46-201ENST00000423569 204 ntBASIC-1.41□□□□□ -2.64
TNFP01375 AC009961.2-201ENST00000435771 251 ntBASIC-1.41□□□□□ -2.64
TNFP01375 RNU6-189P-201ENST00000516120 101 ntBASIC-1.41□□□□□ -2.64
TNFP01375 Y_RNA.665-201ENST00000516177 98 ntBASIC-1.41□□□□□ -2.64
TNFP01375 RNU2-31P-201ENST00000516954 155 ntBASIC-1.41□□□□□ -2.64
TNFP01375 MTATP6P25-201ENST00000574491 261 ntBASIC-1.41□□□□□ -2.64
TNFP01375 MIR5696-201ENST00000578474 85 ntBASIC-1.41□□□□□ -2.64
TNFP01375 MIR5188-201ENST00000583467 113 ntBASIC-1.41□□□□□ -2.64
TNFP01375 AL008718.3-201ENST00000610217 321 ntBASIC-1.41□□□□□ -2.64
TNFP01375 MIR548O2-201ENST00000616090 70 ntBASIC-1.41□□□□□ -2.64
TNFP01375 Y_RNA.7-201ENST00000362352 102 ntBASIC-1.42□□□□□ -2.64
TNFP01375 RNU6-282P-201ENST00000365357 103 ntBASIC-1.42□□□□□ -2.64
TNFP01375 RNU6-1200P-201ENST00000384162 107 ntBASIC-1.42□□□□□ -2.64
TNFP01375 Y_RNA.533-201ENST00000384596 114 ntBASIC-1.42□□□□□ -2.64
TNFP01375 RNU6-1307P-201ENST00000391012 103 ntBASIC-1.42□□□□□ -2.64
TNFP01375 RNU6-1086P-201ENST00000410930 100 ntBASIC-1.42□□□□□ -2.64
TNFP01375 RNU4-88P-201ENST00000411220 86 ntBASIC-1.42□□□□□ -2.64
TNFP01375 MTATP6P19-201ENST00000413797 659 ntBASIC-1.42□□□□□ -2.64
TNFP01375 USP9YP23-201ENST00000455085 407 ntBASIC-1.42□□□□□ -2.64
TNFP01375 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-1.42□□□□□ -2.64
TNFP01375 Y_RNA.809-201ENST00000516058 95 ntBASIC-1.42□□□□□ -2.64
TNFP01375 RNU6-559P-201ENST00000516151 98 ntBASIC-1.42□□□□□ -2.64
TNFP01375 RNU7-137P-201ENST00000516788 62 ntBASIC-1.42□□□□□ -2.64
TNFP01375 RNU7-35P-201ENST00000517174 62 ntBASIC-1.42□□□□□ -2.64
TNFP01375 AC145350.1-201ENST00000567426 208 ntBASIC-1.42□□□□□ -2.64
TNFP01375 AC018638.8-201ENST00000588755 281 ntBASIC-1.42□□□□□ -2.64
TNFP01375 U6.100-201ENST00000636230 99 ntBASIC-1.42□□□□□ -2.64
TNFP01375 RNY4P34-201ENST00000364779 95 ntBASIC-1.43□□□□□ -2.64
TNFP01375 SNORA72.3-201ENST00000365074 132 ntBASIC-1.43□□□□□ -2.64
TNFP01375 RNU6-80P-201ENST00000384195 107 ntBASIC-1.43□□□□□ -2.64
TNFP01375 RNU6-21P-201ENST00000384710 107 ntBASIC-1.43□□□□□ -2.64
TNFP01375 MIR1207-201ENST00000408249 87 ntBASIC-1.43□□□□□ -2.64
TNFP01375 MIR548AG1-201ENST00000579932 66 ntBASIC-1.43□□□□□ -2.64
TNFP01375 AC122108.2-201ENST00000611946 526 ntBASIC-1.43□□□□□ -2.64
TNFP01375 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-1.43□□□□□ -2.64
TNFP01375 AC073534.2-201ENST00000620377 381 ntBASIC-1.43□□□□□ -2.64
TNFP01375 snoR1.1-201ENST00000628177 80 ntBASIC-1.43□□□□□ -2.64
TNFP01375 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-1.43□□□□□ -2.64
TNFP01375 Y_RNA.153-201ENST00000363615 91 ntBASIC-1.44□□□□□ -2.64
TNFP01375 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.44□□□□□ -2.64
TNFP01375 RNU6-647P-201ENST00000364243 107 ntBASIC-1.44□□□□□ -2.64
TNFP01375 SNORA62.4-201ENST00000365504 151 ntBASIC-1.44□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 167.3 ms