Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 RNU6-617P-201ENST00000516147 107 ntBASIC0.09□□□□□ -2.4
MBD3O95983 RNU6-473P-201ENST00000516164 107 ntBASIC0.09□□□□□ -2.4
MBD3O95983 RNU6-1049P-201ENST00000516414 107 ntBASIC0.09□□□□□ -2.4
MBD3O95983 AC112693.2-201ENST00000556538 232 ntBASIC0.09□□□□□ -2.4
MBD3O95983 MIR4768-201ENST00000585270 74 ntBASIC0.09□□□□□ -2.4
MBD3O95983 AP001282.2-201ENST00000616149 309 ntBASIC0.09□□□□□ -2.4
MBD3O95983 MIR302B-201ENST00000362188 73 ntBASIC0.08□□□□□ -2.4
MBD3O95983 Y_RNA.19-201ENST00000362462 99 ntBASIC0.08□□□□□ -2.4
MBD3O95983 Y_RNA.454-201ENST00000384224 113 ntBASIC0.08□□□□□ -2.4
MBD3O95983 Y_RNA.542-201ENST00000384641 111 ntBASIC0.08□□□□□ -2.4
MBD3O95983 Y_RNA.567-201ENST00000384736 106 ntBASIC0.08□□□□□ -2.4
MBD3O95983 MIR215-201ENST00000384858 110 ntBASIC0.08□□□□□ -2.4
MBD3O95983 SNORD93-201ENST00000408813 74 ntBASIC0.08□□□□□ -2.4
MBD3O95983 AL138752.1-201ENST00000452964 351 ntBASIC0.08□□□□□ -2.4
MBD3O95983 MIR3152-201ENST00000579801 74 ntBASIC0.08□□□□□ -2.4
MBD3O95983 Y_RNA.7-201ENST00000362352 102 ntBASIC0.07□□□□□ -2.4
MBD3O95983 RNA5SP257-201ENST00000363023 116 ntBASIC0.07□□□□□ -2.4
MBD3O95983 Y_RNA.128-201ENST00000363391 112 ntBASIC0.07□□□□□ -2.4
MBD3O95983 SNORA36.1-201ENST00000363424 132 ntBASIC0.07□□□□□ -2.4
MBD3O95983 SNORA42.1-201ENST00000363515 137 ntBASIC0.07□□□□□ -2.4
MBD3O95983 Y_RNA.158-201ENST00000363651 101 ntBASIC0.07□□□□□ -2.4
MBD3O95983 Y_RNA.174-201ENST00000363781 105 ntBASIC0.07□□□□□ -2.4
MBD3O95983 Y_RNA.275-201ENST00000364726 110 ntBASIC0.07□□□□□ -2.4
MBD3O95983 RNU6-1228P-201ENST00000391014 107 ntBASIC0.07□□□□□ -2.4
MBD3O95983 RNU4-83P-201ENST00000410863 133 ntBASIC0.07□□□□□ -2.4
MBD3O95983 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.07□□□□□ -2.4
MBD3O95983 AL512326.2-201ENST00000426359 151 ntBASIC0.07□□□□□ -2.4
MBD3O95983 AC073261.1-201ENST00000429409 121 ntBASIC0.07□□□□□ -2.4
MBD3O95983 SNRPGP8-201ENST00000454064 226 ntBASIC0.07□□□□□ -2.4
MBD3O95983 RNU6-469P-201ENST00000516253 101 ntBASIC0.07□□□□□ -2.4
MBD3O95983 RNU6-765P-201ENST00000516916 99 ntBASIC0.07□□□□□ -2.4
MBD3O95983 AC133485.4-201ENST00000561835 220 ntBASIC0.07□□□□□ -2.4
MBD3O95983 Y_RNA.804-201ENST00000615262 101 ntBASIC0.07□□□□□ -2.4
MBD3O95983 AL662814.1-201ENST00000617364 121 ntBASIC0.07□□□□□ -2.4
MBD3O95983 MIR371B-201ENST00000638082 66 ntBASIC0.07□□□□□ -2.4
MBD3O95983 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
MBD3O95983 Y_RNA.91-201ENST00000363042 107 ntBASIC0.06□□□□□ -2.4
MBD3O95983 RNU4-10P-201ENST00000364383 140 ntBASIC0.06□□□□□ -2.4
MBD3O95983 Y_RNA.351-201ENST00000365436 96 ntBASIC0.06□□□□□ -2.4
MBD3O95983 Y_RNA.455-201ENST00000384230 98 ntBASIC0.06□□□□□ -2.4
MBD3O95983 RNY3P15-201ENST00000516297 97 ntBASIC0.06□□□□□ -2.4
MBD3O95983 MIR4305-201ENST00000583252 102 ntBASIC0.06□□□□□ -2.4
MBD3O95983 MIR6828-201ENST00000636181 60 ntBASIC0.06□□□□□ -2.4
MBD3O95983 RNU6-1292P-201ENST00000383856 107 ntBASIC0.05□□□□□ -2.4
MBD3O95983 Y_RNA.419-201ENST00000384041 102 ntBASIC0.05□□□□□ -2.4
MBD3O95983 RNU6-815P-201ENST00000384080 113 ntBASIC0.05□□□□□ -2.4
MBD3O95983 RNU6-474P-201ENST00000384243 107 ntBASIC0.05□□□□□ -2.4
MBD3O95983 MIR616-201ENST00000385293 97 ntBASIC0.05□□□□□ -2.4
MBD3O95983 RPL21P38-201ENST00000418090 167 ntBASIC0.05□□□□□ -2.4
MBD3O95983 Y_RNA.84-201ENST00000363011 104 ntBASIC0.04□□□□□ -2.4
MBD3O95983 Y_RNA.280-201ENST00000364765 112 ntBASIC0.04□□□□□ -2.4
MBD3O95983 RNU6-1289P-201ENST00000384431 106 ntBASIC0.04□□□□□ -2.4
MBD3O95983 Y_RNA.509-201ENST00000384506 99 ntBASIC0.04□□□□□ -2.4
MBD3O95983 Y_RNA.618-201ENST00000410949 107 ntBASIC0.04□□□□□ -2.4
MBD3O95983 RNU6-1338P-201ENST00000516328 91 ntBASIC0.04□□□□□ -2.4
MBD3O95983 AC113195.1-201ENST00000579952 141 ntBASIC0.04□□□□□ -2.4
MBD3O95983 AC134503.1-201ENST00000633048 54 ntBASIC0.04□□□□□ -2.4
MBD3O95983 RNU5E-4P-201ENST00000364931 120 ntBASIC0.03□□□□□ -2.4
MBD3O95983 Y_RNA.304-201ENST00000365011 112 ntBASIC0.03□□□□□ -2.4
MBD3O95983 Y_RNA.572-201ENST00000384757 98 ntBASIC0.03□□□□□ -2.4
MBD3O95983 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.03□□□□□ -2.4
MBD3O95983 RNA5SP237-201ENST00000410414 113 ntBASIC0.03□□□□□ -2.4
MBD3O95983 SNORD2.1-201ENST00000458762 69 ntBASIC0.03□□□□□ -2.4
MBD3O95983 RNA5SP268-201ENST00000516828 124 ntBASIC0.03□□□□□ -2.4
MBD3O95983 MIR5197-201ENST00000583721 112 ntBASIC0.03□□□□□ -2.4
MBD3O95983 MIR6082-201ENST00000613604 109 ntBASIC0.03□□□□□ -2.4
MBD3O95983 AL160413.1-201ENST00000622780 310 ntBASIC0.03□□□□□ -2.4
MBD3O95983 SNORD114-16-201ENST00000363044 70 ntBASIC0.02□□□□□ -2.41
MBD3O95983 SNORA1-201ENST00000384107 130 ntBASIC0.02□□□□□ -2.41
MBD3O95983 AC113618.1-201ENST00000416747 285 ntBASIC0.02□□□□□ -2.41
MBD3O95983 RPL39P25-201ENST00000449384 154 ntBASIC0.02□□□□□ -2.41
MBD3O95983 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.02□□□□□ -2.41
MBD3O95983 MIR342-201ENST00000362212 99 ntBASIC0.01□□□□□ -2.41
MBD3O95983 Y_RNA.16-201ENST00000362421 102 ntBASIC0.01□□□□□ -2.41
MBD3O95983 Y_RNA.82-201ENST00000363000 102 ntBASIC0.01□□□□□ -2.41
MBD3O95983 Y_RNA.92-201ENST00000363043 102 ntBASIC0.01□□□□□ -2.41
MBD3O95983 Y_RNA.210-201ENST00000364161 110 ntBASIC0.01□□□□□ -2.41
MBD3O95983 Y_RNA.235-201ENST00000364412 102 ntBASIC0.01□□□□□ -2.41
MBD3O95983 Y_RNA.306-201ENST00000365015 102 ntBASIC0.01□□□□□ -2.41
MBD3O95983 Y_RNA.312-201ENST00000365089 102 ntBASIC0.01□□□□□ -2.41
MBD3O95983 Y_RNA.322-201ENST00000365151 102 ntBASIC0.01□□□□□ -2.41
MBD3O95983 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
MBD3O95983 U8.15-201ENST00000390947 134 ntBASIC0.01□□□□□ -2.41
MBD3O95983 Y_RNA.588-201ENST00000391254 102 ntBASIC0.01□□□□□ -2.41
MBD3O95983 RNU6-1203P-201ENST00000410703 110 ntBASIC0.01□□□□□ -2.41
MBD3O95983 Y_RNA.650-201ENST00000459002 102 ntBASIC0.01□□□□□ -2.41
MBD3O95983 TRBVB-201ENST00000477100 408 ntBASIC0.01□□□□□ -2.41
MBD3O95983 Y_RNA.777-201ENST00000516982 102 ntBASIC0.01□□□□□ -2.41
MBD3O95983 Y_RNA.771-201ENST00000598668 102 ntBASIC0.01□□□□□ -2.41
MBD3O95983 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.01□□□□□ -2.41
MBD3O95983 Y_RNA.789-201ENST00000622480 102 ntBASIC0.01□□□□□ -2.41
MBD3O95983 MIR6841-201ENST00000637129 72 ntBASIC0.01□□□□□ -2.41
MBD3O95983 SNORD114-9-201ENST00000364370 72 ntBASIC0□□□□□ -2.41
MBD3O95983 RNU6-806P-201ENST00000365147 105 ntBASIC0□□□□□ -2.41
MBD3O95983 SNORA22B-201ENST00000383876 138 ntBASIC0□□□□□ -2.41
MBD3O95983 Y_RNA.460-201ENST00000384255 102 ntBASIC0□□□□□ -2.41
MBD3O95983 MIR644A-201ENST00000385262 94 ntBASIC0□□□□□ -2.41
MBD3O95983 AL606845.1-201ENST00000404881 255 ntBASIC0□□□□□ -2.41
MBD3O95983 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0□□□□□ -2.41
MBD3O95983 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 183.9 ms