Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 RNU4-67P-201ENST00000364569 141 ntBASIC0.01□□□□□ -2.41
CPSF4O95639 Y_RNA.355-201ENST00000365462 98 ntBASIC0.01□□□□□ -2.41
CPSF4O95639 Y_RNA.431-201ENST00000384086 102 ntBASIC0.01□□□□□ -2.41
CPSF4O95639 RNU6-1289P-201ENST00000384431 106 ntBASIC0.01□□□□□ -2.41
CPSF4O95639 MIR193B-201ENST00000384907 83 ntBASIC0.01□□□□□ -2.41
CPSF4O95639 MIR613-201ENST00000385248 95 ntBASIC0.01□□□□□ -2.41
CPSF4O95639 RNU6-1228P-201ENST00000391014 107 ntBASIC0.01□□□□□ -2.41
CPSF4O95639 RNA5SP261-201ENST00000410536 106 ntBASIC0.01□□□□□ -2.41
CPSF4O95639 AC069271.1-201ENST00000445577 156 ntBASIC0.01□□□□□ -2.41
CPSF4O95639 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.01□□□□□ -2.41
CPSF4O95639 MIR4801-201ENST00000582704 82 ntBASIC0.01□□□□□ -2.41
CPSF4O95639 AC097639.2-201ENST00000603159 172 ntBASIC0.01□□□□□ -2.41
CPSF4O95639 MIR7107-201ENST00000611489 80 ntBASIC0.01□□□□□ -2.41
CPSF4O95639 Y_RNA.23-201ENST00000362496 106 ntBASIC0□□□□□ -2.41
CPSF4O95639 Y_RNA.117-201ENST00000363294 101 ntBASIC0□□□□□ -2.41
CPSF4O95639 RNA5SP214-201ENST00000363378 118 ntBASIC0□□□□□ -2.41
CPSF4O95639 SNORA42.1-201ENST00000363515 137 ntBASIC0□□□□□ -2.41
CPSF4O95639 Y_RNA.276-201ENST00000364732 109 ntBASIC0□□□□□ -2.41
CPSF4O95639 Y_RNA.588-201ENST00000391254 102 ntBASIC0□□□□□ -2.41
CPSF4O95639 SEPT7P4-201ENST00000437076 306 ntBASIC0□□□□□ -2.41
CPSF4O95639 SERF1AP1-201ENST00000514575 187 ntBASIC0□□□□□ -2.41
CPSF4O95639 SNORA31.14-201ENST00000516728 116 ntBASIC0□□□□□ -2.41
CPSF4O95639 RNU6-453P-201ENST00000516819 85 ntBASIC0□□□□□ -2.41
CPSF4O95639 SCARNA24.2-201ENST00000516968 130 ntBASIC0□□□□□ -2.41
CPSF4O95639 RNU6-988P-201ENST00000519081 107 ntBASIC0□□□□□ -2.41
CPSF4O95639 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0□□□□□ -2.41
CPSF4O95639 MIR6082-201ENST00000613604 109 ntBASIC0□□□□□ -2.41
CPSF4O95639 MIR6755-201ENST00000619993 66 ntBASIC0□□□□□ -2.41
CPSF4O95639 MTND4P29-201ENST00000503122 1372 ntBASIC-0.01□□□□□ -2.41
CPSF4O95639 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.01□□□□□ -2.41
CPSF4O95639 Y_RNA.84-201ENST00000363011 104 ntBASIC-0.01□□□□□ -2.41
CPSF4O95639 SNORD114-16-201ENST00000363044 70 ntBASIC-0.01□□□□□ -2.41
CPSF4O95639 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.01□□□□□ -2.41
CPSF4O95639 SNORD114-9-201ENST00000364370 72 ntBASIC-0.01□□□□□ -2.41
CPSF4O95639 Y_RNA.275-201ENST00000364726 110 ntBASIC-0.01□□□□□ -2.41
CPSF4O95639 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.01□□□□□ -2.41
CPSF4O95639 Y_RNA.393-201ENST00000383936 102 ntBASIC-0.01□□□□□ -2.41
CPSF4O95639 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.01□□□□□ -2.41
CPSF4O95639 RNY3P5-201ENST00000384127 102 ntBASIC-0.01□□□□□ -2.41
CPSF4O95639 Y_RNA.527-201ENST00000384573 102 ntBASIC-0.01□□□□□ -2.41
CPSF4O95639 RNY1P4-201ENST00000384595 115 ntBASIC-0.01□□□□□ -2.41
CPSF4O95639 AL606845.1-201ENST00000404881 255 ntBASIC-0.01□□□□□ -2.41
CPSF4O95639 AC096949.1-201ENST00000412047 152 ntBASIC-0.01□□□□□ -2.41
CPSF4O95639 SUMO1P3-201ENST00000439961 304 ntBASIC-0.01□□□□□ -2.41
CPSF4O95639 MTND5P22-201ENST00000458380 195 ntBASIC-0.01□□□□□ -2.41
CPSF4O95639 RNU7-80P-201ENST00000459562 61 ntBASIC-0.01□□□□□ -2.41
CPSF4O95639 RNU6-1338P-201ENST00000516328 91 ntBASIC-0.01□□□□□ -2.41
CPSF4O95639 AC141846.1-201ENST00000568348 142 ntBASIC-0.01□□□□□ -2.41
CPSF4O95639 AC113195.1-201ENST00000579952 141 ntBASIC-0.01□□□□□ -2.41
CPSF4O95639 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-0.01□□□□□ -2.41
CPSF4O95639 MIR4491-201ENST00000581087 68 ntBASIC-0.01□□□□□ -2.41
CPSF4O95639 MIR3129-201ENST00000581095 76 ntBASIC-0.01□□□□□ -2.41
CPSF4O95639 MIR5197-201ENST00000583721 112 ntBASIC-0.01□□□□□ -2.41
CPSF4O95639 PVT1_3.1-201ENST00000620853 95 ntBASIC-0.01□□□□□ -2.41
CPSF4O95639 AC091932.4-201ENST00000623386 200 ntBASIC-0.01□□□□□ -2.41
CPSF4O95639 MIR371B-201ENST00000638082 66 ntBASIC-0.01□□□□□ -2.41
CPSF4O95639 AL596211.1-201ENST00000569873 2277 ntBASIC-0.02□□□□□ -2.41
CPSF4O95639 MIR411-201ENST00000362239 96 ntBASIC-0.02□□□□□ -2.41
CPSF4O95639 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.02□□□□□ -2.41
CPSF4O95639 snoU2_19.4-201ENST00000364329 80 ntBASIC-0.02□□□□□ -2.41
CPSF4O95639 SNORA22B-201ENST00000383876 138 ntBASIC-0.02□□□□□ -2.41
CPSF4O95639 Y_RNA.455-201ENST00000384230 98 ntBASIC-0.02□□□□□ -2.41
CPSF4O95639 Y_RNA.509-201ENST00000384506 99 ntBASIC-0.02□□□□□ -2.41
CPSF4O95639 PCNPP3-201ENST00000393579 471 ntBASIC-0.02□□□□□ -2.41
CPSF4O95639 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.02□□□□□ -2.41
CPSF4O95639 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC-0.02□□□□□ -2.41
CPSF4O95639 MIR3152-201ENST00000579801 74 ntBASIC-0.02□□□□□ -2.41
CPSF4O95639 AC104408.1-201ENST00000605241 170 ntBASIC-0.02□□□□□ -2.41
CPSF4O95639 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-0.02□□□□□ -2.41
CPSF4O95639 MIR6828-201ENST00000636181 60 ntBASIC-0.02□□□□□ -2.41
CPSF4O95639 SNORA9.1-201ENST00000362412 131 ntBASIC-0.03□□□□□ -2.41
CPSF4O95639 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.03□□□□□ -2.41
CPSF4O95639 Y_RNA.158-201ENST00000363651 101 ntBASIC-0.03□□□□□ -2.41
CPSF4O95639 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.03□□□□□ -2.41
CPSF4O95639 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.03□□□□□ -2.41
CPSF4O95639 RNU6-187P-201ENST00000384139 106 ntBASIC-0.03□□□□□ -2.41
CPSF4O95639 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.03□□□□□ -2.41
CPSF4O95639 SNORA72.6-201ENST00000384520 129 ntBASIC-0.03□□□□□ -2.41
CPSF4O95639 RNU6-291P-201ENST00000384720 107 ntBASIC-0.03□□□□□ -2.41
CPSF4O95639 MIR616-201ENST00000385293 97 ntBASIC-0.03□□□□□ -2.41
CPSF4O95639 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.03□□□□□ -2.41
CPSF4O95639 AC022028.1-201ENST00000412054 408 ntBASIC-0.03□□□□□ -2.41
CPSF4O95639 RNU6-1143P-201ENST00000516125 104 ntBASIC-0.03□□□□□ -2.41
CPSF4O95639 RNA5SP227-201ENST00000516184 113 ntBASIC-0.03□□□□□ -2.41
CPSF4O95639 RNU6-765P-201ENST00000516916 99 ntBASIC-0.03□□□□□ -2.41
CPSF4O95639 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.03□□□□□ -2.41
CPSF4O95639 RNA5SP47-201ENST00000517230 109 ntBASIC-0.03□□□□□ -2.41
CPSF4O95639 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.04□□□□□ -2.42
CPSF4O95639 MIR330-201ENST00000362196 94 ntBASIC-0.04□□□□□ -2.42
CPSF4O95639 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.04□□□□□ -2.42
CPSF4O95639 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.04□□□□□ -2.42
CPSF4O95639 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.04□□□□□ -2.42
CPSF4O95639 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.04□□□□□ -2.42
CPSF4O95639 SNORD28-201ENST00000384706 75 ntBASIC-0.04□□□□□ -2.42
CPSF4O95639 RNA5SP63-201ENST00000391225 112 ntBASIC-0.04□□□□□ -2.42
CPSF4O95639 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.04□□□□□ -2.42
CPSF4O95639 RNU6-651P-201ENST00000411040 105 ntBASIC-0.04□□□□□ -2.42
CPSF4O95639 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.04□□□□□ -2.42
CPSF4O95639 RNU6-561P-201ENST00000516222 102 ntBASIC-0.04□□□□□ -2.42
CPSF4O95639 MTND5P34-201ENST00000568888 325 ntBASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms