Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 RNU6-597P-201ENST00000365620 102 ntBASIC0.41□□□□□ -2.34
CTDNEP1O95476 Y_RNA.410-201ENST00000383992 113 ntBASIC0.41□□□□□ -2.34
CTDNEP1O95476 Y_RNA.539-201ENST00000384635 107 ntBASIC0.41□□□□□ -2.34
CTDNEP1O95476 Y_RNA.562-201ENST00000384695 113 ntBASIC0.41□□□□□ -2.34
CTDNEP1O95476 MIR520F-201ENST00000384824 87 ntBASIC0.41□□□□□ -2.34
CTDNEP1O95476 MIR588-201ENST00000384900 83 ntBASIC0.41□□□□□ -2.34
CTDNEP1O95476 MIR573-201ENST00000384964 99 ntBASIC0.41□□□□□ -2.34
CTDNEP1O95476 MIR563-201ENST00000385080 79 ntBASIC0.41□□□□□ -2.34
CTDNEP1O95476 MIR520H-201ENST00000385126 88 ntBASIC0.41□□□□□ -2.34
CTDNEP1O95476 RNA5SP222-201ENST00000411039 105 ntBASIC0.41□□□□□ -2.34
CTDNEP1O95476 RNU7-56P-201ENST00000458744 62 ntBASIC0.41□□□□□ -2.34
CTDNEP1O95476 snoU13.2-201ENST00000459201 104 ntBASIC0.41□□□□□ -2.34
CTDNEP1O95476 RNU7-96P-201ENST00000459535 64 ntBASIC0.41□□□□□ -2.34
CTDNEP1O95476 RNU6-977P-201ENST00000516411 103 ntBASIC0.41□□□□□ -2.34
CTDNEP1O95476 MIR342-201ENST00000362212 99 ntBASIC0.4□□□□□ -2.35
CTDNEP1O95476 MIR30D-201ENST00000362283 70 ntBASIC0.4□□□□□ -2.35
CTDNEP1O95476 SNORA1.1-201ENST00000364671 133 ntBASIC0.4□□□□□ -2.35
CTDNEP1O95476 RNY4P28-201ENST00000365281 93 ntBASIC0.4□□□□□ -2.35
CTDNEP1O95476 RNU4-17P-201ENST00000365598 141 ntBASIC0.4□□□□□ -2.35
CTDNEP1O95476 RNU6-1011P-201ENST00000384668 107 ntBASIC0.4□□□□□ -2.35
CTDNEP1O95476 SNORA26-201ENST00000391286 122 ntBASIC0.4□□□□□ -2.35
CTDNEP1O95476 RNU6-1165P-201ENST00000410119 107 ntBASIC0.4□□□□□ -2.35
CTDNEP1O95476 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.4□□□□□ -2.35
CTDNEP1O95476 AC008608.1-201ENST00000603910 127 ntBASIC0.4□□□□□ -2.35
CTDNEP1O95476 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.4□□□□□ -2.35
CTDNEP1O95476 MIR7111-201ENST00000619751 72 ntBASIC0.4□□□□□ -2.35
CTDNEP1O95476 MIR6717-201ENST00000622747 73 ntBASIC0.4□□□□□ -2.35
CTDNEP1O95476 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.4□□□□□ -2.35
CTDNEP1O95476 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.39□□□□□ -2.35
CTDNEP1O95476 SNORD18A-201ENST00000363753 72 ntBASIC0.39□□□□□ -2.35
CTDNEP1O95476 Y_RNA.262-201ENST00000364641 102 ntBASIC0.39□□□□□ -2.35
CTDNEP1O95476 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
CTDNEP1O95476 RNU4-43P-201ENST00000410628 137 ntBASIC0.39□□□□□ -2.35
CTDNEP1O95476 RNU6-177P-201ENST00000411257 104 ntBASIC0.39□□□□□ -2.35
CTDNEP1O95476 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.39□□□□□ -2.35
CTDNEP1O95476 MTND2P23-201ENST00000422990 651 ntBASIC0.39□□□□□ -2.35
CTDNEP1O95476 Y_RNA.668-201ENST00000516233 93 ntBASIC0.39□□□□□ -2.35
CTDNEP1O95476 SCARNA15.1-201ENST00000516384 125 ntBASIC0.39□□□□□ -2.35
CTDNEP1O95476 Y_RNA.680-201ENST00000516441 93 ntBASIC0.39□□□□□ -2.35
CTDNEP1O95476 MIR5197-201ENST00000583721 112 ntBASIC0.39□□□□□ -2.35
CTDNEP1O95476 PVT1_3.1-201ENST00000620853 95 ntBASIC0.39□□□□□ -2.35
CTDNEP1O95476 U6.104-201ENST00000637979 90 ntBASIC0.39□□□□□ -2.35
CTDNEP1O95476 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
CTDNEP1O95476 Y_RNA.149-201ENST00000363558 117 ntBASIC0.38□□□□□ -2.35
CTDNEP1O95476 RNU6-978P-201ENST00000364371 103 ntBASIC0.38□□□□□ -2.35
CTDNEP1O95476 Y_RNA.308-201ENST00000365043 101 ntBASIC0.38□□□□□ -2.35
CTDNEP1O95476 Y_RNA.351-201ENST00000365436 96 ntBASIC0.38□□□□□ -2.35
CTDNEP1O95476 RNU6-945P-201ENST00000383947 107 ntBASIC0.38□□□□□ -2.35
CTDNEP1O95476 RNU6-493P-201ENST00000391321 108 ntBASIC0.38□□□□□ -2.35
CTDNEP1O95476 MTCYBP9-201ENST00000431021 303 ntBASIC0.38□□□□□ -2.35
CTDNEP1O95476 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.38□□□□□ -2.35
CTDNEP1O95476 MIR3612-201ENST00000579753 87 ntBASIC0.38□□□□□ -2.35
CTDNEP1O95476 MIR4308-201ENST00000580634 81 ntBASIC0.38□□□□□ -2.35
CTDNEP1O95476 MIR4744-201ENST00000581563 82 ntBASIC0.38□□□□□ -2.35
CTDNEP1O95476 AL365205.2-201ENST00000594586 68 ntBASIC0.38□□□□□ -2.35
CTDNEP1O95476 Z83818.1-201ENST00000603584 150 ntBASIC0.38□□□□□ -2.35
CTDNEP1O95476 RNU2-4P-201ENST00000606190 192 ntBASIC0.38□□□□□ -2.35
CTDNEP1O95476 AC091932.4-201ENST00000623386 200 ntBASIC0.38□□□□□ -2.35
CTDNEP1O95476 MIR18A-201ENST00000362310 71 ntBASIC0.37□□□□□ -2.35
CTDNEP1O95476 RNU6-728P-201ENST00000365375 104 ntBASIC0.37□□□□□ -2.35
CTDNEP1O95476 SNORA36.2-201ENST00000384004 127 ntBASIC0.37□□□□□ -2.35
CTDNEP1O95476 SNORA50A-201ENST00000384225 134 ntBASIC0.37□□□□□ -2.35
CTDNEP1O95476 Y_RNA.477-201ENST00000384352 108 ntBASIC0.37□□□□□ -2.35
CTDNEP1O95476 Y_RNA.542-201ENST00000384641 111 ntBASIC0.37□□□□□ -2.35
CTDNEP1O95476 MIR216A-201ENST00000385063 110 ntBASIC0.37□□□□□ -2.35
CTDNEP1O95476 SNORD58.1-201ENST00000391313 66 ntBASIC0.37□□□□□ -2.35
CTDNEP1O95476 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.37□□□□□ -2.35
CTDNEP1O95476 MIR18B-201ENST00000454574 71 ntBASIC0.37□□□□□ -2.35
CTDNEP1O95476 RNU7-185P-201ENST00000459215 60 ntBASIC0.37□□□□□ -2.35
CTDNEP1O95476 RNU6-327P-201ENST00000516270 127 ntBASIC0.37□□□□□ -2.35
CTDNEP1O95476 SNORD27-201ENST00000363981 72 ntBASIC0.36□□□□□ -2.35
CTDNEP1O95476 RNU6-923P-201ENST00000364753 107 ntBASIC0.36□□□□□ -2.35
CTDNEP1O95476 Y_RNA.288-201ENST00000364854 92 ntBASIC0.36□□□□□ -2.35
CTDNEP1O95476 RNU6-1292P-201ENST00000383856 107 ntBASIC0.36□□□□□ -2.35
CTDNEP1O95476 MIR125B2-201ENST00000385128 89 ntBASIC0.36□□□□□ -2.35
CTDNEP1O95476 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
CTDNEP1O95476 RNU6-578P-201ENST00000390980 103 ntBASIC0.36□□□□□ -2.35
CTDNEP1O95476 AL121914.1-201ENST00000450188 156 ntBASIC0.36□□□□□ -2.35
CTDNEP1O95476 SCARNA15-202ENST00000516881 127 ntBASIC0.36□□□□□ -2.35
CTDNEP1O95476 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.36□□□□□ -2.35
CTDNEP1O95476 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.36□□□□□ -2.35
CTDNEP1O95476 AC243829.6-201ENST00000612652 106 ntBASIC0.36□□□□□ -2.35
CTDNEP1O95476 Y_RNA.65-201ENST00000362846 100 ntBASIC0.35□□□□□ -2.35
CTDNEP1O95476 RNU6-103P-201ENST00000363686 107 ntBASIC0.35□□□□□ -2.35
CTDNEP1O95476 RNU6-342P-201ENST00000384521 104 ntBASIC0.35□□□□□ -2.35
CTDNEP1O95476 RNU6-1237P-201ENST00000384777 107 ntBASIC0.35□□□□□ -2.35
CTDNEP1O95476 MIR140-201ENST00000385282 100 ntBASIC0.35□□□□□ -2.35
CTDNEP1O95476 MIR938-201ENST00000401216 83 ntBASIC0.35□□□□□ -2.35
CTDNEP1O95476 Y_RNA.618-201ENST00000410949 107 ntBASIC0.35□□□□□ -2.35
CTDNEP1O95476 Y_RNA.626-201ENST00000411288 95 ntBASIC0.35□□□□□ -2.35
CTDNEP1O95476 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.35□□□□□ -2.35
CTDNEP1O95476 SEPT7P4-201ENST00000437076 306 ntBASIC0.35□□□□□ -2.35
CTDNEP1O95476 RNU7-102P-201ENST00000458948 62 ntBASIC0.35□□□□□ -2.35
CTDNEP1O95476 SNORD92-201ENST00000585078 85 ntBASIC0.35□□□□□ -2.35
CTDNEP1O95476 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.35□□□□□ -2.35
CTDNEP1O95476 MIR6841-201ENST00000637129 72 ntBASIC0.35□□□□□ -2.35
CTDNEP1O95476 AL596211.1-201ENST00000569873 2277 ntBASIC0.35□□□□□ -2.35
CTDNEP1O95476 MIR302B-201ENST00000362188 73 ntBASIC0.34□□□□□ -2.36
CTDNEP1O95476 Y_RNA.20-201ENST00000362479 113 ntBASIC0.34□□□□□ -2.36
CTDNEP1O95476 RNU6-1336P-201ENST00000383886 109 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms