Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 RNU6-377P-201ENST00000515965 102 ntBASIC-0.98□□□□□ -2.57
USH2AO75445 RNU6-531P-201ENST00000516694 104 ntBASIC-0.98□□□□□ -2.57
USH2AO75445 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.98□□□□□ -2.57
USH2AO75445 Y_RNA.699-201ENST00000516803 93 ntBASIC-0.98□□□□□ -2.57
USH2AO75445 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-0.98□□□□□ -2.57
USH2AO75445 Y_RNA.62-201ENST00000362840 99 ntBASIC-0.98□□□□□ -2.57
USH2AO75445 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.98□□□□□ -2.57
USH2AO75445 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.98□□□□□ -2.57
USH2AO75445 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.98□□□□□ -2.57
USH2AO75445 SNORA72-201ENST00000384339 132 ntBASIC-0.98□□□□□ -2.57
USH2AO75445 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC-0.98□□□□□ -2.57
USH2AO75445 AL607023.1-201ENST00000620045 248 ntBASIC-0.98□□□□□ -2.57
USH2AO75445 Y_RNA.22-201ENST00000362492 102 ntBASIC-0.99□□□□□ -2.57
USH2AO75445 SNORD115-5-201ENST00000363633 82 ntBASIC-0.99□□□□□ -2.57
USH2AO75445 SNORD115-39-201ENST00000363694 82 ntBASIC-0.99□□□□□ -2.57
USH2AO75445 SNORA63.6-201ENST00000364921 119 ntBASIC-0.99□□□□□ -2.57
USH2AO75445 RNU6-867P-201ENST00000364956 107 ntBASIC-0.99□□□□□ -2.57
USH2AO75445 SNORD115-1-201ENST00000364961 82 ntBASIC-0.99□□□□□ -2.57
USH2AO75445 RNU2-39P-201ENST00000410604 198 ntBASIC-0.99□□□□□ -2.57
USH2AO75445 AC078809.1-201ENST00000427601 140 ntBASIC-0.99□□□□□ -2.57
USH2AO75445 MTND2P32-201ENST00000521584 1038 ntBASIC-0.99□□□□□ -2.57
USH2AO75445 AP001836.1-201ENST00000604675 523 ntBASIC-0.99□□□□□ -2.57
USH2AO75445 AC022418.1-201ENST00000624118 445 ntBASIC-0.99□□□□□ -2.57
USH2AO75445 AL078596.1-201ENST00000624856 447 ntBASIC-0.99□□□□□ -2.57
USH2AO75445 Y_RNA.384-201ENST00000383909 102 ntBASIC-0.99□□□□□ -2.57
USH2AO75445 MIR579-201ENST00000385221 98 ntBASIC-0.99□□□□□ -2.57
USH2AO75445 RNU6-550P-201ENST00000391057 101 ntBASIC-0.99□□□□□ -2.57
USH2AO75445 AC114878.1-201ENST00000441166 358 ntBASIC-0.99□□□□□ -2.57
USH2AO75445 RNU6-1129P-201ENST00000515964 104 ntBASIC-0.99□□□□□ -2.57
USH2AO75445 AL133153.1-201ENST00000557756 303 ntBASIC-0.99□□□□□ -2.57
USH2AO75445 MIR3920-201ENST00000581751 86 ntBASIC-0.99□□□□□ -2.57
USH2AO75445 AC021443.1-201ENST00000604478 211 ntBASIC-0.99□□□□□ -2.57
USH2AO75445 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-0.99□□□□□ -2.57
USH2AO75445 AC021451.1-201ENST00000523498 1129 ntBASIC-0.99□□□□□ -2.57
USH2AO75445 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC-0.99□□□□□ -2.57
USH2AO75445 SNORD56.1-201ENST00000362913 68 ntBASIC-0.99□□□□□ -2.57
USH2AO75445 MTND1P24-201ENST00000552175 861 ntBASIC-0.99□□□□□ -2.57
USH2AO75445 AL669831.3-213ENST00000636676 183 ntBASIC-0.99□□□□□ -2.57
USH2AO75445 MIR519A1-201ENST00000385257 85 ntBASIC-1□□□□□ -2.57
USH2AO75445 UBE2D3P4-201ENST00000441973 436 ntBASIC-1□□□□□ -2.57
USH2AO75445 UBE2V1P12-201ENST00000503954 474 ntBASIC-1□□□□□ -2.57
USH2AO75445 MIR1270-201ENST00000459320 83 ntBASIC-1□□□□□ -2.57
USH2AO75445 SUMO2P5-201ENST00000506790 245 ntBASIC-1□□□□□ -2.57
USH2AO75445 AC010598.1-201ENST00000510378 103 ntBASIC-1□□□□□ -2.57
USH2AO75445 Y_RNA.680-201ENST00000516441 93 ntBASIC-1□□□□□ -2.57
USH2AO75445 MTND1P36-201ENST00000522384 936 ntBASIC-1□□□□□ -2.57
USH2AO75445 AC133794.1-201ENST00000602731 914 ntBASIC-1□□□□□ -2.57
USH2AO75445 AC109347.2-201ENST00000610220 349 ntBASIC-1□□□□□ -2.57
USH2AO75445 RNU6-522P-201ENST00000364497 107 ntBASIC-1□□□□□ -2.57
USH2AO75445 RNU6-309P-201ENST00000364573 106 ntBASIC-1□□□□□ -2.57
USH2AO75445 SNORD50B-201ENST00000364995 70 ntBASIC-1□□□□□ -2.57
USH2AO75445 RNU6-246P-201ENST00000384702 107 ntBASIC-1□□□□□ -2.57
USH2AO75445 MIR320B2-201ENST00000408479 138 ntBASIC-1□□□□□ -2.57
USH2AO75445 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-1□□□□□ -2.57
USH2AO75445 HIF1AP1-201ENST00000553642 175 ntBASIC-1□□□□□ -2.57
USH2AO75445 MTND5P26-201ENST00000426018 1752 ntBASIC-1□□□□□ -2.57
USH2AO75445 AC005345.1-201ENST00000431868 217 ntBASIC-1.01□□□□□ -2.57
USH2AO75445 MTND3P4-201ENST00000453537 303 ntBASIC-1.01□□□□□ -2.57
USH2AO75445 AC090502.2-201ENST00000549267 280 ntBASIC-1.01□□□□□ -2.57
USH2AO75445 LARP7P2-201ENST00000575306 125 ntBASIC-1.01□□□□□ -2.57
USH2AO75445 Y_RNA.24-201ENST00000362508 103 ntBASIC-1.01□□□□□ -2.57
USH2AO75445 RNU6-478P-201ENST00000363904 110 ntBASIC-1.01□□□□□ -2.57
USH2AO75445 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.01□□□□□ -2.57
USH2AO75445 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.01□□□□□ -2.57
USH2AO75445 AC072039.2-201ENST00000608883 439 ntBASIC-1.01□□□□□ -2.57
USH2AO75445 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-1.01□□□□□ -2.57
USH2AO75445 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.01□□□□□ -2.57
USH2AO75445 RNU6-340P-201ENST00000364005 107 ntBASIC-1.01□□□□□ -2.57
USH2AO75445 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-1.01□□□□□ -2.57
USH2AO75445 AL049829.1-201ENST00000465411 156 ntBASIC-1.01□□□□□ -2.57
USH2AO75445 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC-1.01□□□□□ -2.57
USH2AO75445 TRAJ51-201ENST00000504127 63 ntBASIC-1.01□□□□□ -2.57
USH2AO75445 SNORD11B-201ENST00000607707 90 ntBASIC-1.01□□□□□ -2.57
USH2AO75445 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-1.01□□□□□ -2.57
USH2AO75445 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-1.01□□□□□ -2.57
USH2AO75445 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.01□□□□□ -2.57
USH2AO75445 MIR15A-201ENST00000607334 83 ntBASIC-1.01□□□□□ -2.57
USH2AO75445 AC091931.1-201ENST00000623488 728 ntBASIC-1.01□□□□□ -2.57
USH2AO75445 AC008873.1-201ENST00000625051 138 ntBASIC-1.01□□□□□ -2.57
USH2AO75445 AC073343.1-201ENST00000328239 651 ntBASIC-1.02□□□□□ -2.57
USH2AO75445 RNU6-456P-201ENST00000384493 107 ntBASIC-1.02□□□□□ -2.57
USH2AO75445 MTCO2P27-201ENST00000420740 428 ntBASIC-1.02□□□□□ -2.57
USH2AO75445 SNORA43.4-201ENST00000629559 138 ntBASIC-1.02□□□□□ -2.57
USH2AO75445 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC-1.02□□□□□ -2.57
USH2AO75445 AC073415.1-201ENST00000449240 153 ntBASIC-1.02□□□□□ -2.57
USH2AO75445 AC108729.2-201ENST00000476543 840 ntBASIC-1.02□□□□□ -2.57
USH2AO75445 RNU7-79P-201ENST00000516082 62 ntBASIC-1.02□□□□□ -2.57
USH2AO75445 AC144568.1-201ENST00000520139 137 ntBASIC-1.02□□□□□ -2.57
USH2AO75445 SCOCP1-201ENST00000554676 349 ntBASIC-1.02□□□□□ -2.57
USH2AO75445 MIR548AC-201ENST00000585049 88 ntBASIC-1.02□□□□□ -2.57
USH2AO75445 AC006435.5-201ENST00000624486 112 ntBASIC-1.02□□□□□ -2.57
USH2AO75445 MTCYBP4-201ENST00000401524 249 ntBASIC-1.02□□□□□ -2.57
USH2AO75445 AL137792.2-201ENST00000443484 235 ntBASIC-1.02□□□□□ -2.57
USH2AO75445 AC087752.4-201ENST00000605911 462 ntBASIC-1.02□□□□□ -2.57
USH2AO75445 SNORD60-201ENST00000383903 83 ntBASIC-1.02□□□□□ -2.57
USH2AO75445 RNU6-893P-201ENST00000458841 100 ntBASIC-1.02□□□□□ -2.57
USH2AO75445 RNU6-559P-201ENST00000516151 98 ntBASIC-1.02□□□□□ -2.57
USH2AO75445 MIR3941-201ENST00000582572 103 ntBASIC-1.02□□□□□ -2.57
USH2AO75445 AC098479.1-201ENST00000609225 154 ntBASIC-1.02□□□□□ -2.57
USH2AO75445 MIR6717-201ENST00000622747 73 ntBASIC-1.02□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 237.8 ms