Protein–RNA interactions for Protein: O60749

SNX2, Sorting nexin-2, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2O60749 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.39□□□□□ -2.19
SNX2O60749 AP001340.1-201ENST00000624405 217 ntBASIC1.39□□□□□ -2.19
SNX2O60749 MIR103A2-201ENST00000362154 78 ntBASIC1.38□□□□□ -2.19
SNX2O60749 RNU6-349P-201ENST00000362402 107 ntBASIC1.38□□□□□ -2.19
SNX2O60749 RNU4-16P-201ENST00000364737 141 ntBASIC1.38□□□□□ -2.19
SNX2O60749 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
SNX2O60749 MTND4LP9-201ENST00000427694 174 ntBASIC1.38□□□□□ -2.19
SNX2O60749 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.38□□□□□ -2.19
SNX2O60749 RNA5SP61-201ENST00000516453 100 ntBASIC1.38□□□□□ -2.19
SNX2O60749 SNORA70.22-201ENST00000517160 124 ntBASIC1.38□□□□□ -2.19
SNX2O60749 MIR4421-201ENST00000578133 69 ntBASIC1.38□□□□□ -2.19
SNX2O60749 AL157834.3-201ENST00000615543 103 ntBASIC1.38□□□□□ -2.19
SNX2O60749 MTATP6P21-201ENST00000440681 189 ntBASIC1.37□□□□□ -2.19
SNX2O60749 MIR3121-201ENST00000579680 77 ntBASIC1.37□□□□□ -2.19
SNX2O60749 MIR6717-201ENST00000622747 73 ntBASIC1.37□□□□□ -2.19
SNX2O60749 MIR222-201ENST00000384992 110 ntBASIC1.36□□□□□ -2.19
SNX2O60749 RNU6-910P-201ENST00000390844 107 ntBASIC1.36□□□□□ -2.19
SNX2O60749 AL603908.1-201ENST00000406098 201 ntBASIC1.36□□□□□ -2.19
SNX2O60749 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.36□□□□□ -2.19
SNX2O60749 AC108081.1-201ENST00000604358 221 ntBASIC1.36□□□□□ -2.19
SNX2O60749 AC021613.1-201ENST00000623880 111 ntBASIC1.36□□□□□ -2.19
SNX2O60749 AC027335.2-201ENST00000624030 375 ntBASIC1.36□□□□□ -2.19
SNX2O60749 MIR6516-201ENST00000630554 81 ntBASIC1.36□□□□□ -2.19
SNX2O60749 Z97988.1-201ENST00000637697 135 ntBASIC1.36□□□□□ -2.19
SNX2O60749 Y_RNA.164-201ENST00000363709 102 ntBASIC1.35□□□□□ -2.19
SNX2O60749 RNU6-654P-201ENST00000364373 107 ntBASIC1.35□□□□□ -2.19
SNX2O60749 RNY1P6-201ENST00000384193 109 ntBASIC1.35□□□□□ -2.19
SNX2O60749 MIR613-201ENST00000385248 95 ntBASIC1.35□□□□□ -2.19
SNX2O60749 SNORD12-201ENST00000391002 90 ntBASIC1.35□□□□□ -2.19
SNX2O60749 SNORA75.2-201ENST00000391138 150 ntBASIC1.35□□□□□ -2.19
SNX2O60749 Y_RNA.586-201ENST00000391146 98 ntBASIC1.35□□□□□ -2.19
SNX2O60749 SNORA75.3-201ENST00000391231 150 ntBASIC1.35□□□□□ -2.19
SNX2O60749 RNU6-240P-201ENST00000516098 97 ntBASIC1.35□□□□□ -2.19
SNX2O60749 RNA5SP404-201ENST00000517118 132 ntBASIC1.35□□□□□ -2.19
SNX2O60749 SNORA1.1-201ENST00000364671 133 ntBASIC1.34□□□□□ -2.19
SNX2O60749 SNORA40-201ENST00000388090 126 ntBASIC1.34□□□□□ -2.19
SNX2O60749 RNU6-1319P-201ENST00000390855 104 ntBASIC1.34□□□□□ -2.19
SNX2O60749 RNU6-747P-201ENST00000390928 104 ntBASIC1.34□□□□□ -2.19
SNX2O60749 RNU6-241P-201ENST00000391148 104 ntBASIC1.34□□□□□ -2.19
SNX2O60749 RNU6-177P-201ENST00000411257 104 ntBASIC1.34□□□□□ -2.19
SNX2O60749 AC244023.1-201ENST00000426884 112 ntBASIC1.34□□□□□ -2.19
SNX2O60749 Y_RNA.692-201ENST00000516627 105 ntBASIC1.34□□□□□ -2.19
SNX2O60749 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.34□□□□□ -2.19
SNX2O60749 AC242498.1-201ENST00000604134 111 ntBASIC1.34□□□□□ -2.19
SNX2O60749 AL359821.1-201ENST00000605519 182 ntBASIC1.34□□□□□ -2.19
SNX2O60749 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.34□□□□□ -2.2
SNX2O60749 Y_RNA.114-201ENST00000363265 113 ntBASIC1.33□□□□□ -2.2
SNX2O60749 RNU1-124P-201ENST00000363861 145 ntBASIC1.33□□□□□ -2.2
SNX2O60749 RNU6-704P-201ENST00000364162 103 ntBASIC1.33□□□□□ -2.2
SNX2O60749 RNU6-690P-201ENST00000365242 106 ntBASIC1.33□□□□□ -2.2
SNX2O60749 SNORD50.2-201ENST00000365465 70 ntBASIC1.33□□□□□ -2.2
SNX2O60749 RNA5SP95-201ENST00000410319 137 ntBASIC1.33□□□□□ -2.2
SNX2O60749 RNU6-602P-201ENST00000411155 105 ntBASIC1.33□□□□□ -2.2
SNX2O60749 RPS23P4-201ENST00000487908 423 ntBASIC1.33□□□□□ -2.2
SNX2O60749 TRMT112P2-201ENST00000512910 132 ntBASIC1.33□□□□□ -2.2
SNX2O60749 U7.2-201ENST00000607576 63 ntBASIC1.33□□□□□ -2.2
SNX2O60749 AC091895.1-201ENST00000624494 256 ntBASIC1.33□□□□□ -2.2
SNX2O60749 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
SNX2O60749 RNU6-396P-201ENST00000365369 105 ntBASIC1.32□□□□□ -2.2
SNX2O60749 MIR758-201ENST00000390227 88 ntBASIC1.32□□□□□ -2.2
SNX2O60749 SNORD79.1-201ENST00000516069 84 ntBASIC1.32□□□□□ -2.2
SNX2O60749 RNU6-1258P-201ENST00000516911 111 ntBASIC1.32□□□□□ -2.2
SNX2O60749 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.32□□□□□ -2.2
SNX2O60749 AC011603.4-201ENST00000611325 277 ntBASIC1.32□□□□□ -2.2
SNX2O60749 AL353770.2-201ENST00000620024 78 ntBASIC1.32□□□□□ -2.2
SNX2O60749 MIR6841-201ENST00000637129 72 ntBASIC1.32□□□□□ -2.2
SNX2O60749 Y_RNA.327-201ENST00000365201 102 ntBASIC1.31□□□□□ -2.2
SNX2O60749 Y_RNA.330-201ENST00000365230 109 ntBASIC1.31□□□□□ -2.2
SNX2O60749 Y_RNA.366-201ENST00000365540 102 ntBASIC1.31□□□□□ -2.2
SNX2O60749 RNU6-321P-201ENST00000410912 106 ntBASIC1.31□□□□□ -2.2
SNX2O60749 RPS3AP1-201ENST00000413190 320 ntBASIC1.31□□□□□ -2.2
SNX2O60749 POLR2J4-204ENST00000418424 324 ntBASIC1.31□□□□□ -2.2
SNX2O60749 RNU1-123P-201ENST00000458950 160 ntBASIC1.31□□□□□ -2.2
SNX2O60749 SEPT14P17-201ENST00000617978 177 ntBASIC1.31□□□□□ -2.2
SNX2O60749 Y_RNA.4-201ENST00000362333 112 ntBASIC1.3□□□□□ -2.2
SNX2O60749 Y_RNA.280-201ENST00000364765 112 ntBASIC1.3□□□□□ -2.2
SNX2O60749 SNORD12C-201ENST00000386307 89 ntBASIC1.3□□□□□ -2.2
SNX2O60749 RNA5SP144-201ENST00000410846 116 ntBASIC1.3□□□□□ -2.2
SNX2O60749 RNU7-21P-201ENST00000459430 62 ntBASIC1.3□□□□□ -2.2
SNX2O60749 MIR2115-201ENST00000516657 100 ntBASIC1.3□□□□□ -2.2
SNX2O60749 RNU11-2P-201ENST00000516898 142 ntBASIC1.3□□□□□ -2.2
SNX2O60749 RNU6-971P-201ENST00000516920 106 ntBASIC1.3□□□□□ -2.2
SNX2O60749 IGKV1-22-201ENST00000524313 326 ntBASIC1.3□□□□□ -2.2
SNX2O60749 AC133485.4-201ENST00000561835 220 ntBASIC1.3□□□□□ -2.2
SNX2O60749 AC138907.4-201ENST00000570107 226 ntBASIC1.3□□□□□ -2.2
SNX2O60749 MIR3152-201ENST00000579801 74 ntBASIC1.3□□□□□ -2.2
SNX2O60749 MIR4781-201ENST00000585250 76 ntBASIC1.3□□□□□ -2.2
SNX2O60749 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
SNX2O60749 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.29□□□□□ -2.2
SNX2O60749 RNU6-235P-201ENST00000362644 107 ntBASIC1.29□□□□□ -2.2
SNX2O60749 SNORA22.1-201ENST00000362701 134 ntBASIC1.29□□□□□ -2.2
SNX2O60749 Y_RNA.171-201ENST00000363760 102 ntBASIC1.29□□□□□ -2.2
SNX2O60749 Y_RNA.430-201ENST00000384081 110 ntBASIC1.29□□□□□ -2.2
SNX2O60749 SNORA80D-201ENST00000384488 135 ntBASIC1.29□□□□□ -2.2
SNX2O60749 SNORD38B-201ENST00000384690 67 ntBASIC1.29□□□□□ -2.2
SNX2O60749 MIR19B1-201ENST00000384829 87 ntBASIC1.29□□□□□ -2.2
SNX2O60749 RNU6-205P-201ENST00000390858 107 ntBASIC1.29□□□□□ -2.2
SNX2O60749 RNU6-1211P-201ENST00000459179 105 ntBASIC1.29□□□□□ -2.2
SNX2O60749 RNU2-35P-201ENST00000516446 142 ntBASIC1.29□□□□□ -2.2
SNX2O60749 RNU6-113P-201ENST00000516653 101 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms