Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 7SK.8-201ENST00000612110 250 ntBASIC1.28□□□□□ -2.2
LDB2O43679 7SK.11-201ENST00000615477 250 ntBASIC1.28□□□□□ -2.2
LDB2O43679 7SK.13-201ENST00000622040 250 ntBASIC1.28□□□□□ -2.2
LDB2O43679 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.27□□□□□ -2.21
LDB2O43679 RNU6-349P-201ENST00000362402 107 ntBASIC1.27□□□□□ -2.21
LDB2O43679 RNU6-508P-201ENST00000363231 103 ntBASIC1.27□□□□□ -2.21
LDB2O43679 RNA5SP261-201ENST00000410536 106 ntBASIC1.27□□□□□ -2.21
LDB2O43679 SNORA31.4-201ENST00000516049 129 ntBASIC1.27□□□□□ -2.21
LDB2O43679 MIR548AO-201ENST00000579992 96 ntBASIC1.27□□□□□ -2.21
LDB2O43679 MIR3910-1-201ENST00000580936 111 ntBASIC1.27□□□□□ -2.21
LDB2O43679 AL020996.3-201ENST00000606617 222 ntBASIC1.27□□□□□ -2.21
LDB2O43679 MIR6078-201ENST00000611069 100 ntBASIC1.27□□□□□ -2.21
LDB2O43679 RNU6-392P-201ENST00000364926 101 ntBASIC1.26□□□□□ -2.21
LDB2O43679 MIR539-201ENST00000365690 78 ntBASIC1.26□□□□□ -2.21
LDB2O43679 RNU6-1054P-201ENST00000411293 104 ntBASIC1.26□□□□□ -2.21
LDB2O43679 snoU13.25-201ENST00000458945 104 ntBASIC1.26□□□□□ -2.21
LDB2O43679 CYP3A52P-201ENST00000563326 91 ntBASIC1.26□□□□□ -2.21
LDB2O43679 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
LDB2O43679 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
LDB2O43679 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
LDB2O43679 RNU6-690P-201ENST00000365242 106 ntBASIC1.25□□□□□ -2.21
LDB2O43679 RNU5E-3P-201ENST00000515913 68 ntBASIC1.25□□□□□ -2.21
LDB2O43679 RNU6-789P-201ENST00000517105 102 ntBASIC1.25□□□□□ -2.21
LDB2O43679 MIR8055-201ENST00000610739 97 ntBASIC1.25□□□□□ -2.21
LDB2O43679 AC021613.1-201ENST00000623880 111 ntBASIC1.25□□□□□ -2.21
LDB2O43679 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.25□□□□□ -2.21
LDB2O43679 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
LDB2O43679 SNORA25.3-201ENST00000363205 127 ntBASIC1.24□□□□□ -2.21
LDB2O43679 Y_RNA.114-201ENST00000363265 113 ntBASIC1.24□□□□□ -2.21
LDB2O43679 Y_RNA.280-201ENST00000364765 112 ntBASIC1.24□□□□□ -2.21
LDB2O43679 RNU6-81P-201ENST00000365608 104 ntBASIC1.24□□□□□ -2.21
LDB2O43679 SNORD26-201ENST00000384147 75 ntBASIC1.24□□□□□ -2.21
LDB2O43679 MIR499A-201ENST00000384903 122 ntBASIC1.24□□□□□ -2.21
LDB2O43679 RNU6-1319P-201ENST00000390855 104 ntBASIC1.24□□□□□ -2.21
LDB2O43679 RNU6-747P-201ENST00000390928 104 ntBASIC1.24□□□□□ -2.21
LDB2O43679 RNU6-241P-201ENST00000391148 104 ntBASIC1.24□□□□□ -2.21
LDB2O43679 SNORA26.6-201ENST00000391256 115 ntBASIC1.24□□□□□ -2.21
LDB2O43679 RNU6-177P-201ENST00000411257 104 ntBASIC1.24□□□□□ -2.21
LDB2O43679 AC245047.7-201ENST00000440265 293 ntBASIC1.24□□□□□ -2.21
LDB2O43679 RNU7-45P-201ENST00000459460 63 ntBASIC1.24□□□□□ -2.21
LDB2O43679 RNU6-971P-201ENST00000516920 106 ntBASIC1.24□□□□□ -2.21
LDB2O43679 AP003716.2-201ENST00000528260 108 ntBASIC1.24□□□□□ -2.21
LDB2O43679 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.24□□□□□ -2.21
LDB2O43679 Z97988.1-201ENST00000637697 135 ntBASIC1.24□□□□□ -2.21
LDB2O43679 AC132825.6-201ENST00000638861 357 ntBASIC1.24□□□□□ -2.21
LDB2O43679 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
LDB2O43679 RNA5SP264-201ENST00000363115 107 ntBASIC1.23□□□□□ -2.21
LDB2O43679 RNU6-647P-201ENST00000364243 107 ntBASIC1.23□□□□□ -2.21
LDB2O43679 SNORA1.1-201ENST00000364671 133 ntBASIC1.23□□□□□ -2.21
LDB2O43679 RNU4-16P-201ENST00000364737 141 ntBASIC1.23□□□□□ -2.21
LDB2O43679 Y_RNA.294-201ENST00000364916 102 ntBASIC1.23□□□□□ -2.21
LDB2O43679 MIR150-201ENST00000385048 84 ntBASIC1.23□□□□□ -2.21
LDB2O43679 MIR1302-7-201ENST00000408841 72 ntBASIC1.23□□□□□ -2.21
LDB2O43679 RNU6-1190P-201ENST00000410811 104 ntBASIC1.23□□□□□ -2.21
LDB2O43679 RNU6-1211P-201ENST00000459179 105 ntBASIC1.23□□□□□ -2.21
LDB2O43679 RNU6-240P-201ENST00000516098 97 ntBASIC1.23□□□□□ -2.21
LDB2O43679 MIR3152-201ENST00000579801 74 ntBASIC1.23□□□□□ -2.21
LDB2O43679 MIR6717-201ENST00000622747 73 ntBASIC1.23□□□□□ -2.21
LDB2O43679 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.22□□□□□ -2.21
LDB2O43679 MIR103A2-201ENST00000362154 78 ntBASIC1.22□□□□□ -2.21
LDB2O43679 Y_RNA.430-201ENST00000384081 110 ntBASIC1.22□□□□□ -2.21
LDB2O43679 HMGN1P33-201ENST00000432945 451 ntBASIC1.22□□□□□ -2.21
LDB2O43679 AL158147.1-201ENST00000443970 75 ntBASIC1.22□□□□□ -2.21
LDB2O43679 RNU6-893P-201ENST00000458841 100 ntBASIC1.22□□□□□ -2.21
LDB2O43679 AC048334.1-201ENST00000477975 159 ntBASIC1.22□□□□□ -2.21
LDB2O43679 SNORA31.2-201ENST00000516019 134 ntBASIC1.22□□□□□ -2.21
LDB2O43679 RNU6-406P-201ENST00000516470 107 ntBASIC1.22□□□□□ -2.21
LDB2O43679 RNU11-2P-201ENST00000516898 142 ntBASIC1.22□□□□□ -2.21
LDB2O43679 AC133485.4-201ENST00000561835 220 ntBASIC1.22□□□□□ -2.21
LDB2O43679 AC138907.4-201ENST00000570107 226 ntBASIC1.22□□□□□ -2.21
LDB2O43679 HSPE1P19-201ENST00000603327 295 ntBASIC1.22□□□□□ -2.21
LDB2O43679 MIR8065-201ENST00000620577 100 ntBASIC1.22□□□□□ -2.21
LDB2O43679 MIR26B-201ENST00000362251 77 ntBASIC1.21□□□□□ -2.22
LDB2O43679 RNU6-53P-201ENST00000365367 106 ntBASIC1.21□□□□□ -2.22
LDB2O43679 MIR1185-1-201ENST00000408598 86 ntBASIC1.21□□□□□ -2.22
LDB2O43679 RPS3AP1-201ENST00000413190 320 ntBASIC1.21□□□□□ -2.22
LDB2O43679 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.21□□□□□ -2.22
LDB2O43679 AC108081.1-201ENST00000604358 221 ntBASIC1.21□□□□□ -2.22
LDB2O43679 PRELID3BP2-201ENST00000605362 201 ntBASIC1.21□□□□□ -2.22
LDB2O43679 MIR6841-201ENST00000637129 72 ntBASIC1.21□□□□□ -2.22
LDB2O43679 RNU6-396P-201ENST00000365369 105 ntBASIC1.2□□□□□ -2.22
LDB2O43679 Y_RNA.366-201ENST00000365540 102 ntBASIC1.2□□□□□ -2.22
LDB2O43679 RNU6-959P-201ENST00000384671 107 ntBASIC1.2□□□□□ -2.22
LDB2O43679 MIR2115-201ENST00000516657 100 ntBASIC1.2□□□□□ -2.22
LDB2O43679 AC021443.1-201ENST00000604478 211 ntBASIC1.2□□□□□ -2.22
LDB2O43679 AL137067.1-201ENST00000615933 120 ntBASIC1.2□□□□□ -2.22
LDB2O43679 SNORA22.1-201ENST00000362701 134 ntBASIC1.19□□□□□ -2.22
LDB2O43679 Y_RNA.354-201ENST00000365448 111 ntBASIC1.19□□□□□ -2.22
LDB2O43679 RNU6-80P-201ENST00000384195 107 ntBASIC1.19□□□□□ -2.22
LDB2O43679 SNORD38B-201ENST00000384690 67 ntBASIC1.19□□□□□ -2.22
LDB2O43679 RNA5SP144-201ENST00000410846 116 ntBASIC1.19□□□□□ -2.22
LDB2O43679 Y_RNA.617-201ENST00000410920 90 ntBASIC1.19□□□□□ -2.22
LDB2O43679 RNU6-602P-201ENST00000411155 105 ntBASIC1.19□□□□□ -2.22
LDB2O43679 AC090844.1-201ENST00000422019 156 ntBASIC1.19□□□□□ -2.22
LDB2O43679 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.19□□□□□ -2.22
LDB2O43679 MIR4305-201ENST00000583252 102 ntBASIC1.19□□□□□ -2.22
LDB2O43679 SNORD38B-202ENST00000625943 69 ntBASIC1.19□□□□□ -2.22
LDB2O43679 RNU6-235P-201ENST00000362644 107 ntBASIC1.18□□□□□ -2.22
LDB2O43679 Y_RNA.218-201ENST00000364218 104 ntBASIC1.18□□□□□ -2.22
LDB2O43679 Y_RNA.224-201ENST00000364308 111 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 202.7 ms