Protein–RNA interactions for Protein: O43542

XRCC3, DNA repair protein XRCC3, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3O43542 RNU6-602P-201ENST00000411155 105 ntBASIC0.82□□□□□ -2.28
XRCC3O43542 ACA64.5-201ENST00000516207 127 ntBASIC0.82□□□□□ -2.28
XRCC3O43542 RNU6-1271P-201ENST00000517049 105 ntBASIC0.82□□□□□ -2.28
XRCC3O43542 AC130289.1-201ENST00000577321 73 ntBASIC0.82□□□□□ -2.28
XRCC3O43542 AC025627.3-201ENST00000582078 182 ntBASIC0.82□□□□□ -2.28
XRCC3O43542 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.81□□□□□ -2.28
XRCC3O43542 MIR302B-201ENST00000362188 73 ntBASIC0.81□□□□□ -2.28
XRCC3O43542 MIR342-201ENST00000362212 99 ntBASIC0.81□□□□□ -2.28
XRCC3O43542 RNU6-47P-201ENST00000383866 107 ntBASIC0.81□□□□□ -2.28
XRCC3O43542 MIR608-201ENST00000384820 100 ntBASIC0.81□□□□□ -2.28
XRCC3O43542 MIR548J-201ENST00000408833 112 ntBASIC0.81□□□□□ -2.28
XRCC3O43542 RNU6-1190P-201ENST00000410811 104 ntBASIC0.81□□□□□ -2.28
XRCC3O43542 RNA5SP127-201ENST00000411051 133 ntBASIC0.81□□□□□ -2.28
XRCC3O43542 AC113410.1-201ENST00000505029 247 ntBASIC0.81□□□□□ -2.28
XRCC3O43542 RNU6-1223P-201ENST00000517124 104 ntBASIC0.81□□□□□ -2.28
XRCC3O43542 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.81□□□□□ -2.28
XRCC3O43542 MIR4431-201ENST00000579990 94 ntBASIC0.81□□□□□ -2.28
XRCC3O43542 AC022709.1-201ENST00000615967 87 ntBASIC0.81□□□□□ -2.28
XRCC3O43542 AC091932.4-201ENST00000623386 200 ntBASIC0.81□□□□□ -2.28
XRCC3O43542 MIR1-1-201ENST00000362147 71 ntBASIC0.8□□□□□ -2.28
XRCC3O43542 Y_RNA.36-201ENST00000362602 112 ntBASIC0.8□□□□□ -2.28
XRCC3O43542 RNU6-312P-201ENST00000364629 107 ntBASIC0.8□□□□□ -2.28
XRCC3O43542 RNU1-93P-201ENST00000364704 169 ntBASIC0.8□□□□□ -2.28
XRCC3O43542 RNU6-1335P-201ENST00000365426 107 ntBASIC0.8□□□□□ -2.28
XRCC3O43542 MIR598-201ENST00000384868 97 ntBASIC0.8□□□□□ -2.28
XRCC3O43542 SNORA26.6-201ENST00000391256 115 ntBASIC0.8□□□□□ -2.28
XRCC3O43542 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.8□□□□□ -2.28
XRCC3O43542 RNA5SP261-201ENST00000410536 106 ntBASIC0.8□□□□□ -2.28
XRCC3O43542 SEPT7P4-201ENST00000437076 306 ntBASIC0.8□□□□□ -2.28
XRCC3O43542 RNU7-62P-201ENST00000458856 62 ntBASIC0.8□□□□□ -2.28
XRCC3O43542 RPL39P28-201ENST00000465655 155 ntBASIC0.8□□□□□ -2.28
XRCC3O43542 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.8□□□□□ -2.28
XRCC3O43542 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.8□□□□□ -2.28
XRCC3O43542 AC211469.2-201ENST00000605461 205 ntBASIC0.8□□□□□ -2.28
XRCC3O43542 MIR6788-201ENST00000618842 66 ntBASIC0.8□□□□□ -2.28
XRCC3O43542 MIR6717-201ENST00000622747 73 ntBASIC0.8□□□□□ -2.28
XRCC3O43542 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.8□□□□□ -2.28
XRCC3O43542 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
XRCC3O43542 RNU6-369P-201ENST00000362515 102 ntBASIC0.79□□□□□ -2.28
XRCC3O43542 RNU6-379P-201ENST00000363813 104 ntBASIC0.79□□□□□ -2.28
XRCC3O43542 SNORA25.7-201ENST00000364375 127 ntBASIC0.79□□□□□ -2.28
XRCC3O43542 Y_RNA.274-201ENST00000364714 101 ntBASIC0.79□□□□□ -2.28
XRCC3O43542 RNU6-934P-201ENST00000365154 107 ntBASIC0.79□□□□□ -2.28
XRCC3O43542 RNU6-597P-201ENST00000365620 102 ntBASIC0.79□□□□□ -2.28
XRCC3O43542 RNU6-1319P-201ENST00000390855 104 ntBASIC0.79□□□□□ -2.28
XRCC3O43542 RNU6-747P-201ENST00000390928 104 ntBASIC0.79□□□□□ -2.28
XRCC3O43542 RNU6-241P-201ENST00000391148 104 ntBASIC0.79□□□□□ -2.28
XRCC3O43542 RNU6-177P-201ENST00000411257 104 ntBASIC0.79□□□□□ -2.28
XRCC3O43542 snoU13.21-201ENST00000459368 105 ntBASIC0.79□□□□□ -2.28
XRCC3O43542 RNU6-113P-201ENST00000516653 101 ntBASIC0.79□□□□□ -2.28
XRCC3O43542 SCARNA15-202ENST00000516881 127 ntBASIC0.79□□□□□ -2.28
XRCC3O43542 AL353765.1-201ENST00000605514 183 ntBASIC0.79□□□□□ -2.28
XRCC3O43542 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.79□□□□□ -2.28
XRCC3O43542 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.78□□□□□ -2.28
XRCC3O43542 Y_RNA.233-201ENST00000364407 101 ntBASIC0.78□□□□□ -2.28
XRCC3O43542 Y_RNA.354-201ENST00000365448 111 ntBASIC0.78□□□□□ -2.28
XRCC3O43542 Y_RNA.515-201ENST00000384535 112 ntBASIC0.78□□□□□ -2.28
XRCC3O43542 RNU2-64P-201ENST00000411315 191 ntBASIC0.78□□□□□ -2.28
XRCC3O43542 AC006461.1-201ENST00000412637 326 ntBASIC0.78□□□□□ -2.28
XRCC3O43542 RPS26P5-201ENST00000418544 335 ntBASIC0.78□□□□□ -2.28
XRCC3O43542 snoU13.2-201ENST00000459201 104 ntBASIC0.78□□□□□ -2.28
XRCC3O43542 MIR6740-201ENST00000618268 113 ntBASIC0.78□□□□□ -2.28
XRCC3O43542 Y_RNA.430-201ENST00000384081 110 ntBASIC0.77□□□□□ -2.29
XRCC3O43542 MIR588-201ENST00000384900 83 ntBASIC0.77□□□□□ -2.29
XRCC3O43542 MIR100-201ENST00000385259 80 ntBASIC0.77□□□□□ -2.29
XRCC3O43542 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.77□□□□□ -2.29
XRCC3O43542 RNU7-45P-201ENST00000459460 63 ntBASIC0.77□□□□□ -2.29
XRCC3O43542 MIR6779-201ENST00000617283 64 ntBASIC0.77□□□□□ -2.29
XRCC3O43542 AL596211.1-201ENST00000569873 2277 ntBASIC0.77□□□□□ -2.29
XRCC3O43542 RNA5SP325-201ENST00000363756 130 ntBASIC0.76□□□□□ -2.29
XRCC3O43542 Y_RNA.297-201ENST00000364950 91 ntBASIC0.76□□□□□ -2.29
XRCC3O43542 Y_RNA.476-201ENST00000384347 108 ntBASIC0.76□□□□□ -2.29
XRCC3O43542 Y_RNA.552-201ENST00000384665 112 ntBASIC0.76□□□□□ -2.29
XRCC3O43542 MIR563-201ENST00000385080 79 ntBASIC0.76□□□□□ -2.29
XRCC3O43542 SNORD105-201ENST00000386910 85 ntBASIC0.76□□□□□ -2.29
XRCC3O43542 SNORD83.1-201ENST00000411362 77 ntBASIC0.76□□□□□ -2.29
XRCC3O43542 MIR18B-201ENST00000454574 71 ntBASIC0.76□□□□□ -2.29
XRCC3O43542 Y_RNA.644-201ENST00000459006 113 ntBASIC0.76□□□□□ -2.29
XRCC3O43542 RNU6-1219P-201ENST00000516143 112 ntBASIC0.76□□□□□ -2.29
XRCC3O43542 Y_RNA.674-201ENST00000516362 113 ntBASIC0.76□□□□□ -2.29
XRCC3O43542 RNU7-70P-201ENST00000516941 66 ntBASIC0.76□□□□□ -2.29
XRCC3O43542 MIR3152-201ENST00000579801 74 ntBASIC0.76□□□□□ -2.29
XRCC3O43542 AC072026.1-201ENST00000605023 201 ntBASIC0.76□□□□□ -2.29
XRCC3O43542 AC078938.1-201ENST00000620993 318 ntBASIC0.76□□□□□ -2.29
XRCC3O43542 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
XRCC3O43542 SNORD114-2-201ENST00000363953 78 ntBASIC0.75□□□□□ -2.29
XRCC3O43542 RNU1-133P-201ENST00000364867 167 ntBASIC0.75□□□□□ -2.29
XRCC3O43542 Y_RNA.393-201ENST00000383936 102 ntBASIC0.75□□□□□ -2.29
XRCC3O43542 RNU6-342P-201ENST00000384521 104 ntBASIC0.75□□□□□ -2.29
XRCC3O43542 Y_RNA.521-201ENST00000384560 114 ntBASIC0.75□□□□□ -2.29
XRCC3O43542 SNORD12C-201ENST00000386307 89 ntBASIC0.75□□□□□ -2.29
XRCC3O43542 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.75□□□□□ -2.29
XRCC3O43542 SNORD99-201ENST00000408612 74 ntBASIC0.75□□□□□ -2.29
XRCC3O43542 RNU6-1165P-201ENST00000410119 107 ntBASIC0.75□□□□□ -2.29
XRCC3O43542 AC107027.2-201ENST00000512197 115 ntBASIC0.75□□□□□ -2.29
XRCC3O43542 PSMC1P5-201ENST00000512850 177 ntBASIC0.75□□□□□ -2.29
XRCC3O43542 RNU6-1149P-201ENST00000516810 97 ntBASIC0.75□□□□□ -2.29
XRCC3O43542 RNU6-388P-201ENST00000517012 105 ntBASIC0.75□□□□□ -2.29
XRCC3O43542 RNU6-389P-201ENST00000517048 105 ntBASIC0.75□□□□□ -2.29
XRCC3O43542 MIR4771-2-201ENST00000577758 74 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 227.8 ms